Magnesium in PDB 8rdy: Saccharomyces Cerevisiae PRP43 Helicase in Complex with PXR1

The binding sites of Magnesium atom in the Saccharomyces Cerevisiae PRP43 Helicase in Complex with PXR1 (pdb code 8rdy). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Saccharomyces Cerevisiae PRP43 Helicase in Complex with PXR1, PDB code: 8rdy:

Magnesium binding site 1 out of 1 in the Saccharomyces Cerevisiae PRP43 Helicase in Complex with PXR1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Saccharomyces Cerevisiae PRP43 Helicase in Complex with PXR1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1202 b:34.8 occ:1.00 O1B A:ADP1201 1.9 56.2 1.0 OG1 A:THR123 2.2 47.3 1.0 PB A:ADP1201 3.3 54.6 1.0 CB A:THR123 3.4 47.2 1.0 HB A:THR123 3.5 47.3 1.0 O A:SER382 3.5 57.1 1.0 OD1 A:ASP215 3.7 49.4 1.0 H A:THR123 3.8 47.1 1.0 O1A A:ADP1201 3.8 49.0 1.0 HE22 A:GLN147 3.9 47.7 1.0 HG22 A:THR123 4.0 46.5 1.0 O2B A:ADP1201 4.1 48.2 1.0 OD2 A:ASP215 4.1 49.0 1.0 O3B A:ADP1201 4.1 69.4 1.0 HG3 A:GLU216 4.1 55.5 1.0 CG A:ASP215 4.2 47.9 1.0 CG2 A:THR123 4.2 47.2 1.0 O3A A:ADP1201 4.3 54.2 1.0 O A:THR381 4.3 73.1 1.0 HG2 A:GLU216 4.3 57.4 1.0 OE2 A:GLU216 4.4 62.6 1.0 N A:THR123 4.4 45.4 1.0 PA A:ADP1201 4.4 57.6 1.0 HA A:SER382 4.5 61.3 1.0 HG21 A:THR123 4.5 48.9 1.0 CA A:THR123 4.5 45.0 1.0 C A:SER382 4.6 55.8 1.0 HB2 A:LYS122 4.6 47.2 1.0 O2A A:ADP1201 4.6 60.3 1.0 OE1 A:GLN147 4.6 41.0 1.0 CG A:GLU216 4.6 59.2 1.0 NE2 A:GLN147 4.7 48.4 1.0 HA A:THR123 4.9 46.3 1.0 CD A:GLU216 4.9 61.3 1.0 HE2 A:LYS122 5.0 51.5 1.0

D.Portugal Hnizda Calisto, J.Rabl, V.G.Panse. An Inhibitory Segment Within G-Patch Activators Tunes PRP43-Atpase Activity During Ribosome Assembly To Be Published.