Magnesium in PDB 8ri1: Bmra E504-100UMATPMG

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Bmra E504-100UMATPMG (pdb code 8ri1). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Bmra E504-100UMATPMG, PDB code: 8ri1:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 8ri1

Go back to Magnesium Binding Sites List in 8ri1
Magnesium binding site 1 out of 2 in the Bmra E504-100UMATPMG


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Bmra E504-100UMATPMG within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg602

b:108.4
occ:1.00
O2G A:ATP601 1.8 104.0 1.0
O2B A:ATP601 1.8 104.0 1.0
OE1 A:GLN422 2.1 104.3 1.0
NE2 A:GLN422 2.6 104.3 1.0
CD A:GLN422 2.7 104.3 1.0
O3B A:ATP601 2.8 104.0 1.0
PB A:ATP601 2.8 104.0 1.0
PG A:ATP601 2.9 104.0 1.0
OG1 A:THR381 3.0 97.5 1.0
O1G A:ATP601 3.7 104.0 1.0
O1B A:ATP601 3.8 104.0 1.0
O3A A:ATP601 4.0 104.0 1.0
OG B:SER480 4.0 106.5 1.0
O3G A:ATP601 4.0 104.0 1.0
CB A:THR381 4.2 97.5 1.0
CG A:GLN422 4.2 104.3 1.0
N B:GLY481 4.5 105.4 1.0
OD1 A:ASP503 4.7 109.0 1.0
CE1 A:HIS535 4.7 116.9 1.0
N A:THR381 4.8 97.5 1.0
CB A:GLN422 4.8 104.3 1.0

Magnesium binding site 2 out of 2 in 8ri1

Go back to Magnesium Binding Sites List in 8ri1
Magnesium binding site 2 out of 2 in the Bmra E504-100UMATPMG


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Bmra E504-100UMATPMG within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg602

b:102.6
occ:1.00
O2B B:ATP601 1.8 104.3 1.0
O2G B:ATP601 1.9 104.3 1.0
O3B B:ATP601 2.0 104.3 1.0
PG B:ATP601 2.2 104.3 1.0
PB B:ATP601 2.2 104.3 1.0
NE2 B:GLN422 2.6 101.5 1.0
O1G B:ATP601 2.6 104.3 1.0
OE1 B:GLN422 2.6 101.5 1.0
CD B:GLN422 3.0 101.5 1.0
O1B B:ATP601 3.1 104.3 1.0
OG1 B:THR381 3.5 97.2 1.0
O3A B:ATP601 3.6 104.3 1.0
O3G B:ATP601 3.6 104.3 1.0
N A:GLY481 4.4 105.8 1.0
NE2 B:HIS535 4.5 118.6 1.0
CG B:GLN422 4.5 101.5 1.0
CE B:LYS380 4.7 97.7 1.0
CA A:GLY481 4.7 105.8 1.0
CB B:THR381 4.8 97.2 1.0
N B:THR381 4.9 97.2 1.0
CB B:LYS380 4.9 97.7 1.0
N A:GLY482 4.9 107.3 1.0

Reference:

A.Gobet, E.Zarkadas, G.Schoehn, P.Falson, V.Chaptal. Bmra E504-100UMATPMG To Be Published.
Page generated: Sun Feb 9 08:11:11 2025

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