Magnesium in PDB 8rik: Microtubule-Associated Kinesin-1 Tail Complex Bound to Adp, Single- Headed State

The binding sites of Magnesium atom in the Microtubule-Associated Kinesin-1 Tail Complex Bound to Adp, Single- Headed State (pdb code 8rik). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Microtubule-Associated Kinesin-1 Tail Complex Bound to Adp, Single- Headed State, PDB code: 8rik:

Magnesium binding site 1 out of 1 in the Microtubule-Associated Kinesin-1 Tail Complex Bound to Adp, Single- Headed State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Microtubule-Associated Kinesin-1 Tail Complex Bound to Adp, Single- Headed State within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:54.0 occ:1.00 O3G A:GTP501 2.0 81.4 1.0 O1B A:GTP501 2.7 81.9 1.0 OE1 A:GLU71 2.9 88.1 1.0 PG A:GTP501 3.2 82.4 1.0 O2G A:GTP501 3.5 81.0 1.0 PB A:GTP501 3.8 74.9 1.0 O3B A:GTP501 3.9 71.1 1.0 CD A:GLU71 4.1 87.0 1.0 O3A A:GTP501 4.4 76.3 1.0 O1G A:GTP501 4.4 84.3 1.0 OE1 A:GLN11 4.4 72.2 1.0 CB A:GLN11 4.5 67.8 1.0 NZ B:LYS254 4.5 63.7 1.0 OD2 A:ASP69 4.5 84.1 1.0 CB A:GLU71 4.6 79.5 1.0 CB A:ASP98 4.7 80.8 1.0 OD1 A:ASP69 4.7 80.0 1.0 OE2 A:GLU71 4.9 86.6 1.0 O B:ASN249 4.9 63.0 1.0 O1A A:GTP501 5.0 83.2 1.0

J.Atherton, M.S.Chegkazi, E.Peirano, L.S.Pozzer, T.Foran, R.A.Steiner. Microtubule Association Induces A Mg-Free Apo-Like Adp Pre-Release Conformation in Kinesin-1 That Is Unaffected By Its Autoinhibitory Tail Biorxiv 2024.
ISSN: ISSN 2692-8205
DOI: 10.1101/2024.11.11.622991