Magnesium in PDB 8riz: Microtubule-Associated Kinesin-1 Tail Complex Bound to Adp, Two-Headed State

The binding sites of Magnesium atom in the Microtubule-Associated Kinesin-1 Tail Complex Bound to Adp, Two-Headed State (pdb code 8riz). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Microtubule-Associated Kinesin-1 Tail Complex Bound to Adp, Two-Headed State, PDB code: 8riz:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Microtubule-Associated Kinesin-1 Tail Complex Bound to Adp, Two-Headed State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Microtubule-Associated Kinesin-1 Tail Complex Bound to Adp, Two-Headed State within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:57.0 occ:1.00 O3G A:GTP501 2.0 89.9 1.0 O1B A:GTP501 2.4 100.1 1.0 OE1 A:GLU71 3.1 107.6 1.0 PG A:GTP501 3.1 97.6 1.0 O2G A:GTP501 3.4 99.8 1.0 PB A:GTP501 3.5 97.1 1.0 O3B A:GTP501 3.7 86.7 1.0 O3A A:GTP501 4.1 88.8 1.0 CB A:GLN11 4.3 80.4 1.0 CD A:GLU71 4.3 106.9 1.0 OE1 A:GLN11 4.3 82.5 1.0 O1G A:GTP501 4.4 103.3 1.0 OD1 A:ASP69 4.5 100.5 1.0 CB A:GLU71 4.5 98.0 1.0 CB A:ASP98 4.6 102.5 1.0 OD2 A:ASP69 4.6 104.0 1.0 N A:GLN11 4.7 80.9 1.0 O2B A:GTP501 4.8 102.0 1.0 O1A A:GTP501 4.8 98.5 1.0 NZ B:LYS254 4.9 85.5 1.0 CG A:ASP69 5.0 103.5 1.0

Magnesium binding site 2 out of 2 in the Microtubule-Associated Kinesin-1 Tail Complex Bound to Adp, Two-Headed State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Microtubule-Associated Kinesin-1 Tail Complex Bound to Adp, Two-Headed State within 5.0Å range: probe atom residue distance (Å) B Occ L:Mg1001 b:66.1 occ:1.00 OG1 L:THR92 2.2 58.4 1.0 O1B L:ADP1002 2.4 60.9 1.0 PB L:ADP1002 3.4 62.9 1.0 CB L:THR92 3.4 54.4 1.0 O2B L:ADP1002 3.5 47.8 1.0 CB L:SER201 3.8 37.5 1.0 OD2 L:ASP231 4.1 75.9 1.0 CG2 L:THR92 4.3 66.3 1.0 O2A L:ADP1002 4.3 60.9 1.0 O L:SER201 4.4 28.2 1.0 N L:THR92 4.4 63.6 1.0 O3A L:ADP1002 4.4 64.6 1.0 CA L:THR92 4.5 49.3 1.0 O3B L:ADP1002 4.6 56.5 1.0 C L:SER201 4.6 35.6 1.0 OG L:SER201 4.6 34.5 1.0 CA L:SER201 4.7 44.7 1.0 PA L:ADP1002 4.8 55.8 1.0 CE L:LYS91 4.9 51.9 1.0 NZ L:LYS91 5.0 54.0 1.0

J.Atherton, M.S.Chegkazi, E.Peirano, L.S.Pozzer, T.Foran, R.A.Steiner. Microtubule Association Induces A Mg-Free Apo-Like Adp Pre-Release Conformation in Kinesin-1 That Is Unaffected By Its Autoinhibitory Tail Biorxiv 2024.
ISSN: ISSN 2692-8205
DOI: 10.1101/2024.11.11.622991