Magnesium in PDB 8roo: Crystal Structure of Hla B*18:01 in Complex with Yermcnil, An 8-Mer Epitope From Influenza A

The structure of Crystal Structure of Hla B*18:01 in Complex with Yermcnil, An 8-Mer Epitope From Influenza A, PDB code: 8roo was solved by L.D.Murdolo, J.C.Maddumage, S.Gras, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.74 / 1.40
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	50.853, 81.482, 111.3, 90, 90, 90
R / Rfree (%)	15.4 / 18.9

The structure of Crystal Structure of Hla B*18:01 in Complex with Yermcnil, An 8-Mer Epitope From Influenza A also contains other interesting chemical elements:

Potassium

(K)

3 atoms

The binding sites of Magnesium atom in the Crystal Structure of Hla B*18:01 in Complex with Yermcnil, An 8-Mer Epitope From Influenza A (pdb code 8roo). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Hla B*18:01 in Complex with Yermcnil, An 8-Mer Epitope From Influenza A, PDB code: 8roo:

Magnesium binding site 1 out of 1 in the Crystal Structure of Hla B*18:01 in Complex with Yermcnil, An 8-Mer Epitope From Influenza A


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Hla B*18:01 in Complex with Yermcnil, An 8-Mer Epitope From Influenza A within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg308 b:17.2 occ:1.00 OH A:TYR118 2.8 9.9 1.0 O A:HOH508 2.8 16.5 1.0 O A:LEU78 2.8 7.8 1.0 CB A:HIS93 3.5 8.6 1.0 CE1 A:TYR118 3.6 7.7 1.0 CZ A:TYR118 3.6 7.1 1.0 C A:LEU78 3.7 7.2 1.0 CD2 A:LEU78 3.7 9.0 1.0 N A:ARG82 3.7 8.4 1.0 CB A:ARG82 3.7 11.9 1.0 CG A:HIS93 3.8 8.8 1.0 CD2 A:HIS93 3.9 9.9 1.0 CA A:LEU78 3.9 7.0 1.0 CB A:LEU78 4.0 7.0 1.0 CA A:ARG82 4.0 8.8 1.0 CB A:LEU81 4.4 8.7 1.0 CG A:LEU78 4.5 7.2 1.0 CG A:ARG82 4.5 16.0 1.0 C A:LEU81 4.5 7.0 1.0 OE1 A:GLN87 4.7 11.9 1.0 OG A:SER13 4.8 10.6 1.0 ND1 A:HIS93 4.8 10.7 1.0 N A:ARG79 4.8 8.2 1.0 CA A:HIS93 4.8 7.7 1.0 NE2 A:HIS93 4.9 11.1 1.0 O A:HOH477 4.9 21.5 1.0 CD1 A:TYR118 4.9 8.1 1.0 CE2 A:TYR118 4.9 8.4 1.0

L.D.Murdolo, J.C.Maddumage, S.Gras. Crystal Structure of Hla B*18:01 in Complex with Yermcnil, An 8-Mer Epitope From Influenza A To Be Published.