Magnesium in PDB 8rv2: Structure of the Formin INF2 Bound to the Barbed End of F-Actin.

The binding sites of Magnesium atom in the Structure of the Formin INF2 Bound to the Barbed End of F-Actin. (pdb code 8rv2). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the Structure of the Formin INF2 Bound to the Barbed End of F-Actin., PDB code: 8rv2:
Jump to Magnesium binding site number: 1; 2; 3; 4;

Magnesium binding site 1 out of 4 in the Structure of the Formin INF2 Bound to the Barbed End of F-Actin.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Formin INF2 Bound to the Barbed End of F-Actin. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:46.8 occ:1.00 O1B A:ADP401 2.2 79.5 1.0 OE1 A:GLN137 3.2 67.4 1.0 PB A:ADP401 3.3 70.5 1.0 O3B A:ADP401 3.7 69.9 1.0 CD A:GLN137 4.1 64.1 1.0 O2B A:ADP401 4.1 67.4 1.0 OD2 A:ASP11 4.3 68.2 1.0 O1A A:ADP401 4.5 70.0 1.0 NE2 A:GLN137 4.5 70.0 1.0 OD2 A:ASP154 4.5 56.8 1.0 CG2 A:VAL339 4.5 59.3 1.0 O3A A:ADP401 4.6 69.2 1.0 OD1 A:ASP154 4.7 52.7 1.0 NZ A:LYS18 4.9 71.3 1.0 CA A:GLY156 4.9 56.1 1.0 CG A:ASP154 5.0 51.8 1.0

Magnesium binding site 2 out of 4 in the Structure of the Formin INF2 Bound to the Barbed End of F-Actin.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of the Formin INF2 Bound to the Barbed End of F-Actin. within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg402 b:7.3 occ:1.00 O3 B:PO4403 2.5 17.7 1.0 O1B B:ADP401 3.0 10.8 1.0 OE1 B:GLN137 3.6 14.5 1.0 NE2 B:GLN137 3.6 13.9 1.0 CD B:GLN137 3.7 12.1 1.0 P B:PO4403 3.9 25.7 1.0 OD2 B:ASP11 4.0 6.5 1.0 PB B:ADP401 4.1 16.1 1.0 O2B B:ADP401 4.3 14.3 1.0 O1 B:PO4403 4.3 31.2 1.0 O3A B:ADP401 4.5 7.5 1.0 OD1 B:ASP11 4.6 5.7 1.0 OD2 B:ASP154 4.6 11.0 1.0 O2 B:PO4403 4.6 16.5 1.0 CG2 B:VAL339 4.7 3.3 1.0 NZ B:LYS18 4.7 7.1 1.0 CG B:ASP11 4.7 5.4 1.0 CG B:GLN137 4.7 5.7 1.0 OD1 B:ASP154 4.8 11.8 1.0 CA B:GLY156 4.9 7.7 1.0 CA B:GLY13 5.0 10.2 1.0 O1A B:ADP401 5.0 9.1 1.0

Magnesium binding site 3 out of 4 in the Structure of the Formin INF2 Bound to the Barbed End of F-Actin.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Structure of the Formin INF2 Bound to the Barbed End of F-Actin. within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg402 b:3.3 occ:1.00 O1B C:ADP401 2.5 5.5 1.0 NE2 C:GLN137 3.3 22.6 1.0 PB C:ADP401 3.5 5.1 1.0 CD C:GLN137 3.8 22.3 1.0 O3B C:ADP401 3.9 7.8 1.0 OE1 C:GLN137 3.9 31.5 1.0 OD2 C:ASP11 3.9 6.5 1.0 O2B C:ADP401 4.1 7.2 1.0 OD1 C:ASP11 4.2 8.9 1.0 CG2 C:VAL339 4.4 8.3 1.0 CG C:ASP11 4.5 7.1 1.0 NZ C:LYS18 4.6 4.8 1.0 CA C:GLY13 4.7 12.4 1.0 CG C:GLN137 4.8 14.2 1.0 CB C:VAL339 4.8 5.9 1.0 O3A C:ADP401 4.9 3.8 1.0 O1A C:ADP401 5.0 3.1 1.0 CG1 C:VAL339 5.0 7.8 1.0

Magnesium binding site 4 out of 4 in the Structure of the Formin INF2 Bound to the Barbed End of F-Actin.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Structure of the Formin INF2 Bound to the Barbed End of F-Actin. within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg402 b:9.5 occ:1.00 O1G D:ATP401 2.0 29.2 1.0 PG D:ATP401 3.3 37.6 1.0 O1B D:ATP401 3.6 9.8 1.0 O3B D:ATP401 3.7 16.4 1.0 OE1 D:GLN137 4.1 20.8 1.0 OD2 D:ASP11 4.2 11.5 1.0 O3G D:ATP401 4.2 22.4 1.0 PB D:ATP401 4.3 12.3 1.0 CG2 D:VAL339 4.3 11.3 1.0 CD D:GLN137 4.3 21.6 1.0 OD1 D:ASP154 4.4 27.1 1.0 O2G D:ATP401 4.4 23.1 1.0 OD1 D:ASP11 4.5 11.7 1.0 NE2 D:GLN137 4.6 22.8 1.0 OD2 D:ASP154 4.7 25.9 1.0 CB D:VAL339 4.7 9.8 1.0 CG D:ASP11 4.8 10.5 1.0 CG1 D:VAL339 4.9 12.5 1.0 CB D:GLN137 4.9 15.2 1.0 CG D:GLN137 5.0 20.9 1.0

W.Oosterheert, M.Boiero Sanders, J.Funk, D.Prumbaum, S.Raunser, P.Bieling. Molecular Mechanism of Actin Filament Elongation By Formins Science V. 384 2024.
ISSN: ESSN 1095-9203