Magnesium in PDB 8shl: Cct G Beta 5 Complex Closed State 5

The structure of Cct G Beta 5 Complex Closed State 5 also contains other interesting chemical elements:

Fluorine	(F)	48 atoms
Aluminium	(Al)	16 atoms

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 16;

Binding sites:

The binding sites of Magnesium atom in the Cct G Beta 5 Complex Closed State 5 (pdb code 8shl). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 16 binding sites of Magnesium where determined in the Cct G Beta 5 Complex Closed State 5, PDB code: 8shl:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 16 in the Cct G Beta 5 Complex Closed State 5


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cct G Beta 5 Complex Closed State 5 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg602 b:87.1 occ:1.00 O3A A:ADP601 2.1 91.4 1.0 O3B A:ADP601 2.2 91.4 1.0 OD1 A:ASP88 2.3 92.3 1.0 F1 A:AF3603 2.4 94.2 1.0 PB A:ADP601 2.5 91.4 1.0 O2B A:ADP601 2.9 91.4 1.0 O2A A:ADP601 3.0 91.4 1.0 PA A:ADP601 3.1 91.4 1.0 CG A:ASP88 3.4 92.3 1.0 AL A:AF3603 3.5 94.2 1.0 NZ A:LYS159 3.6 91.3 1.0 OD2 A:ASP88 3.9 92.3 1.0 O1B A:ADP601 3.9 91.4 1.0 N A:GLY89 4.1 89.6 1.0 O5' A:ADP601 4.1 91.4 1.0 O1A A:ADP601 4.2 91.4 1.0 F3 A:AF3603 4.5 94.2 1.0 F2 A:AF3603 4.5 94.2 1.0 CB A:ASP88 4.7 92.3 1.0 OD2 A:ASP394 4.8 93.7 1.0 OG A:SER158 4.8 92.5 1.0 CA A:GLY89 4.8 89.6 1.0 O A:HOH702 4.8 88.3 1.0 CA A:ASP88 4.8 92.3 1.0 CE A:LYS159 4.9 91.3 1.0 C A:ASP88 5.0 92.3 1.0

Magnesium binding site 2 out of 16 in the Cct G Beta 5 Complex Closed State 5


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cct G Beta 5 Complex Closed State 5 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg602 b:97.2 occ:1.00 O3A B:ADP601 2.0 90.9 1.0 OD1 B:ASP97 2.0 93.4 1.0 F1 B:AF3603 2.0 95.7 1.0 O2A B:ADP601 2.1 90.9 1.0 OD2 B:ASP97 2.2 93.4 1.0 CG B:ASP97 2.4 93.4 1.0 PA B:ADP601 2.6 90.9 1.0 PB B:ADP601 3.5 90.9 1.0 O5' B:ADP601 3.5 90.9 1.0 AL B:AF3603 3.7 95.7 1.0 O B:THR166 3.8 86.5 1.0 O2B B:ADP601 3.8 90.9 1.0 O1A B:ADP601 3.8 90.9 1.0 O3B B:ADP601 3.9 90.9 1.0 CB B:ASP97 3.9 93.4 1.0 CG2 B:THR166 4.2 86.5 1.0 CE B:LYS170 4.3 86.7 1.0 NZ B:LYS170 4.4 86.7 1.0 CA B:THR166 4.4 86.5 1.0 O1B B:ADP601 4.5 90.9 1.0 C B:THR166 4.5 86.5 1.0 F3 B:AF3603 4.6 95.7 1.0 CA B:ASP97 4.7 93.4 1.0 C5' B:ADP601 4.8 90.9 1.0 F2 B:AF3603 4.8 95.7 1.0 CB B:THR166 4.9 86.5 1.0 N B:GLY98 4.9 91.9 1.0

Magnesium binding site 3 out of 16 in the Cct G Beta 5 Complex Closed State 5


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Cct G Beta 5 Complex Closed State 5 within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg602 b:93.7 occ:1.00 O3A D:ADP601 2.0 91.9 1.0 F2 D:AF3603 2.0 92.6 1.0 OD1 D:ASP104 2.0 91.4 1.0 O2A D:ADP601 2.0 91.9 1.0 PA D:ADP601 2.5 91.9 1.0 CG D:ASP104 2.8 91.4 1.0 OD2 D:ASP104 2.8 91.4 1.0 O5' D:ADP601 3.4 91.9 1.0 PB D:ADP601 3.5 91.9 1.0 AL D:AF3603 3.8 92.6 1.0 O1A D:ADP601 3.8 91.9 1.0 O2B D:ADP601 3.8 91.9 1.0 O3B D:ADP601 4.0 91.9 1.0 N D:GLY105 4.2 87.9 1.0 CB D:ASP104 4.2 91.4 1.0 NZ D:LYS174 4.3 91.9 1.0 O D:SER170 4.3 93.3 1.0 O1B D:ADP601 4.5 91.9 1.0 OG D:SER173 4.5 93.2 1.0 C5' D:ADP601 4.7 91.9 1.0 CA D:SER170 4.7 93.3 1.0 F1 D:AF3603 4.7 92.6 1.0 CA D:ASP104 4.8 91.4 1.0 OD2 D:ASP407 4.8 92.4 1.0 OG D:SER170 4.9 93.3 1.0 C D:SER170 5.0 93.3 1.0 C D:ASP104 5.0 91.4 1.0 CA D:GLY105 5.0 87.9 1.0

Magnesium binding site 4 out of 16 in the Cct G Beta 5 Complex Closed State 5


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Cct G Beta 5 Complex Closed State 5 within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg602 b:89.2 occ:1.00 F1 E:AF3603 1.9 85.0 1.0 O3A E:ADP601 2.1 86.3 1.0 O2A E:ADP601 2.1 86.3 1.0 OD1 E:ASP104 2.3 89.8 1.0 PA E:ADP601 2.6 86.3 1.0 CG E:ASP104 3.2 89.8 1.0 OD2 E:ASP104 3.3 89.8 1.0 O5' E:ADP601 3.4 86.3 1.0 PB E:ADP601 3.5 86.3 1.0 AL E:AF3603 3.6 85.0 1.0 O2B E:ADP601 3.9 86.3 1.0 O3B E:ADP601 3.9 86.3 1.0 O1A E:ADP601 3.9 86.3 1.0 O E:THR172 4.0 86.1 1.0 NZ E:LYS176 4.2 84.4 1.0 OG E:SER175 4.2 84.4 1.0 F3 E:AF3603 4.2 85.0 1.0 N E:GLY105 4.4 86.8 1.0 CG2 E:THR172 4.5 86.1 1.0 O1B E:ADP601 4.6 86.3 1.0 CB E:ASP104 4.6 89.8 1.0 CA E:THR172 4.6 86.1 1.0 C5' E:ADP601 4.7 86.3 1.0 C E:THR172 4.8 86.1 1.0 F2 E:AF3603 4.9 85.0 1.0

Magnesium binding site 5 out of 16 in the Cct G Beta 5 Complex Closed State 5


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Cct G Beta 5 Complex Closed State 5 within 5.0Å range: probe atom residue distance (Å) B Occ G:Mg602 b:92.5 occ:1.00 O2A G:ADP601 2.0 92.9 1.0 F2 G:AF3603 2.1 98.2 1.0 O2B G:ADP601 2.1 92.9 1.0 O3B G:ADP601 2.2 92.9 1.0 PB G:ADP601 2.5 92.9 1.0 PA G:ADP601 3.1 92.9 1.0 O3A G:ADP601 3.2 92.9 1.0 AL G:AF3603 3.4 98.2 1.0 CB G:ASP93 3.6 94.0 1.0 OD2 G:ASP93 3.7 94.0 1.0 N G:GLY94 3.8 93.7 1.0 O1B G:ADP601 3.9 92.9 1.0 CG G:ASP93 4.1 94.0 1.0 F1 G:AF3603 4.1 98.2 1.0 C5' G:ADP601 4.2 92.9 1.0 O5' G:ADP601 4.2 92.9 1.0 O1A G:ADP601 4.2 92.9 1.0 OG1 G:THR162 4.4 89.8 1.0 CA G:ASP93 4.5 94.0 1.0 OD2 G:ASP393 4.5 89.9 1.0 CA G:GLY94 4.6 93.7 1.0 F3 G:AF3603 4.6 98.2 1.0 C G:ASP93 4.7 94.0 1.0 O G:SER159 4.9 89.3 1.0

Magnesium binding site 6 out of 16 in the Cct G Beta 5 Complex Closed State 5


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Cct G Beta 5 Complex Closed State 5 within 5.0Å range: probe atom residue distance (Å) B Occ H:Mg602 b:91.7 occ:1.00 F2 H:AF3603 1.9 93.0 1.0 O3A H:ADP601 2.1 90.6 1.0 OD1 H:ASP92 2.2 87.5 1.0 O2A H:ADP601 2.2 90.6 1.0 PA H:ADP601 2.7 90.6 1.0 CG H:ASP92 2.8 87.5 1.0 OD2 H:ASP92 2.9 87.5 1.0 PB H:ADP601 3.6 90.6 1.0 AL H:AF3603 3.6 93.0 1.0 O5' H:ADP601 3.7 90.6 1.0 C5' H:ADP601 3.7 90.6 1.0 O2B H:ADP601 3.9 90.6 1.0 O1A H:ADP601 3.9 90.6 1.0 O H:ALA162 4.0 89.7 1.0 O3B H:ADP601 4.0 90.6 1.0 CB H:ASP92 4.3 87.5 1.0 NZ H:LYS166 4.3 95.3 1.0 F1 H:AF3603 4.5 93.0 1.0 O1B H:ADP601 4.6 90.6 1.0 N H:GLY93 4.7 87.0 1.0 CA H:ALA162 4.8 89.7 1.0 C H:ALA162 4.8 89.7 1.0 F3 H:AF3603 4.9 93.0 1.0 CA H:ASP92 5.0 87.5 1.0

Magnesium binding site 7 out of 16 in the Cct G Beta 5 Complex Closed State 5


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Cct G Beta 5 Complex Closed State 5 within 5.0Å range: probe atom residue distance (Å) B Occ Q:Mg602 b:82.9 occ:1.00 O2A Q:ADP601 2.0 82.5 1.0 OD1 Q:ASP99 2.0 80.8 1.0 OD2 Q:ASP99 2.1 80.8 1.0 O2B Q:ADP601 2.1 82.5 1.0 CG Q:ASP99 2.3 80.8 1.0 O3B Q:ADP601 2.4 82.5 1.0 PB Q:ADP601 2.7 82.5 1.0 NZ Q:LYS171 2.7 86.3 1.0 PA Q:ADP601 3.2 82.5 1.0 O3A Q:ADP601 3.4 82.5 1.0 CB Q:ASP99 3.8 80.8 1.0 O1B Q:ADP601 4.1 82.5 1.0 AL Q:AF3603 4.1 84.7 1.0 F2 Q:AF3603 4.1 84.7 1.0 N Q:GLY100 4.1 77.7 1.0 CE Q:LYS171 4.1 86.3 1.0 F1 Q:AF3603 4.2 84.7 1.0 O5' Q:ADP601 4.3 82.5 1.0 C5' Q:ADP601 4.3 82.5 1.0 O1A Q:ADP601 4.3 82.5 1.0 CA Q:ASP99 4.5 80.8 1.0 OG Q:SER170 4.6 88.6 1.0 CB Q:SER170 4.6 88.6 1.0 OD2 Q:ASP394 4.7 84.2 1.0 O Q:SER167 4.7 88.2 1.0 CD Q:LYS171 4.7 86.3 1.0 F3 Q:AF3603 4.7 84.7 1.0 C Q:ASP99 4.8 80.8 1.0 CA Q:GLY100 5.0 77.7 1.0

Magnesium binding site 8 out of 16 in the Cct G Beta 5 Complex Closed State 5


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Cct G Beta 5 Complex Closed State 5 within 5.0Å range: probe atom residue distance (Å) B Occ Z:Mg602 b:104.5 occ:1.00 OD1 Z:ASP90 2.0 99.7 1.0 O2B Z:ADP601 2.0 99.6 1.0 O2A Z:ADP601 2.0 99.6 1.0 NZ Z:LYS159 2.4 105.7 1.0 O3B Z:ADP601 2.7 99.6 1.0 PB Z:ADP601 2.8 99.6 1.0 CG Z:ASP90 2.9 99.7 1.0 OD2 Z:ASP90 3.0 99.7 1.0 CE Z:LYS159 3.2 105.7 1.0 PA Z:ADP601 3.2 99.6 1.0 O3A Z:ADP601 3.5 99.6 1.0 AL Z:AF3603 4.0 105.1 1.0 F1 Z:AF3603 4.0 105.1 1.0 O1A Z:ADP601 4.1 99.6 1.0 F2 Z:AF3603 4.1 105.1 1.0 O1B Z:ADP601 4.2 99.6 1.0 OG1 Z:THR158 4.2 107.5 1.0 CB Z:ASP90 4.3 99.7 1.0 F3 Z:AF3603 4.4 105.1 1.0 O5' Z:ADP601 4.4 99.6 1.0 N Z:GLY91 4.5 96.9 1.0 CD Z:LYS159 4.5 105.7 1.0 CA Z:ASP90 4.7 99.7 1.0 CG Z:LYS159 4.7 105.7 1.0

Magnesium binding site 9 out of 16 in the Cct G Beta 5 Complex Closed State 5


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Cct G Beta 5 Complex Closed State 5 within 5.0Å range: probe atom residue distance (Å) B Occ a:Mg602 b:93.4 occ:1.00 O3A a:ADP601 2.1 96.8 1.0 OD1 a:ASP88 2.3 91.1 1.0 F1 a:AF3603 2.7 93.5 1.0 O1B a:ADP601 2.7 96.8 1.0 PB a:ADP601 3.0 96.8 1.0 CG a:ASP88 3.1 91.1 1.0 OD2 a:ASP88 3.2 91.1 1.0 O1A a:ADP601 3.2 96.8 1.0 PA a:ADP601 3.2 96.8 1.0 O2B a:ADP601 3.7 96.8 1.0 O5' a:ADP601 3.9 96.8 1.0 AL a:AF3603 4.0 93.5 1.0 O a:SER155 4.2 94.3 1.0 O3B a:ADP601 4.2 96.8 1.0 N a:GLY89 4.3 89.1 1.0 NZ a:LYS159 4.3 88.7 1.0 O2A a:ADP601 4.4 96.8 1.0 CB a:ASP88 4.5 91.1 1.0 CA a:SER155 4.8 94.3 1.0 OD2 a:ASP394 4.9 88.1 1.0 C a:SER155 4.9 94.3 1.0 CA a:ASP88 4.9 91.1 1.0 F2 a:AF3603 5.0 93.5 1.0 F3 a:AF3603 5.0 93.5 1.0

Magnesium binding site 10 out of 16 in the Cct G Beta 5 Complex Closed State 5


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Cct G Beta 5 Complex Closed State 5 within 5.0Å range: probe atom residue distance (Å) B Occ b:Mg602 b:95.9 occ:1.00 OD1 b:ASP97 2.0 93.0 1.0 F1 b:AF3603 2.0 94.4 1.0 O3A b:ADP601 2.0 92.1 1.0 O1A b:ADP601 2.0 92.1 1.0 PA b:ADP601 2.5 92.1 1.0 CG b:ASP97 3.1 93.0 1.0 PB b:ADP601 3.5 92.1 1.0 AL b:AF3603 3.5 94.4 1.0 O5' b:ADP601 3.5 92.1 1.0 OD2 b:ASP97 3.5 93.0 1.0 O b:THR166 3.6 86.3 1.0 O2A b:ADP601 3.8 92.1 1.0 CE b:LYS170 3.8 90.2 1.0 O2B b:ADP601 3.8 92.1 1.0 O1B b:ADP601 3.9 92.1 1.0 F3 b:AF3603 4.0 94.4 1.0 NZ b:LYS170 4.3 90.2 1.0 CB b:ASP97 4.3 93.0 1.0 CG2 b:THR166 4.4 86.3 1.0 CA b:THR166 4.5 86.3 1.0 C b:THR166 4.5 86.3 1.0 O3B b:ADP601 4.5 92.1 1.0 OD2 b:ASP392 4.7 90.7 1.0 C5' b:ADP601 4.8 92.1 1.0 CB b:SER169 4.8 92.4 1.0 CA b:ASP97 5.0 93.0 1.0 CB b:THR166 5.0 86.3 1.0

S.Wang, M.Sass, M.B.Willardson, P.S.Shen. Visualizing the Chaperone-Mediated Folding Trajectory of the G Protein Beta 5 Beta-Propeller Structure To Be Published.