Magnesium in PDB 8sng: Crystal Structure of Arnb Transferase From Klebsiella Aerogenes (Lattice Translocation Disorder, P21 Form)

The structure of Crystal Structure of Arnb Transferase From Klebsiella Aerogenes (Lattice Translocation Disorder, P21 Form), PDB code: 8sng was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	58.82 / 1.55
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	60.084, 101.351, 68.483, 90, 101.78, 90
R / Rfree (%)	19.8 / 22

The structure of Crystal Structure of Arnb Transferase From Klebsiella Aerogenes (Lattice Translocation Disorder, P21 Form) also contains other interesting chemical elements:

Sodium

(Na)

2 atoms

The binding sites of Magnesium atom in the Crystal Structure of Arnb Transferase From Klebsiella Aerogenes (Lattice Translocation Disorder, P21 Form) (pdb code 8sng). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Arnb Transferase From Klebsiella Aerogenes (Lattice Translocation Disorder, P21 Form), PDB code: 8sng:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of Arnb Transferase From Klebsiella Aerogenes (Lattice Translocation Disorder, P21 Form)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Arnb Transferase From Klebsiella Aerogenes (Lattice Translocation Disorder, P21 Form) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg404 b:19.1 occ:1.00 O A:PHE276 2.3 16.2 1.0 O A:HOH720 2.3 30.3 1.0 O A:HOH747 2.4 18.2 1.0 O A:THR274 2.4 20.4 1.0 O A:LEU271 2.5 17.1 1.0 C A:THR274 3.5 18.9 1.0 C A:PHE276 3.5 15.8 1.0 C A:LEU271 3.6 22.1 1.0 OG1 A:THR274 3.7 18.7 1.0 O A:ALA272 3.8 28.8 1.0 C A:ALA272 3.9 30.4 1.0 CA A:ALA272 4.0 19.7 1.0 N A:PHE276 4.0 16.3 1.0 N A:THR274 4.0 20.6 1.0 C A:PRO275 4.1 18.5 1.0 N A:ALA272 4.2 19.7 1.0 CA A:THR274 4.3 21.9 1.0 CD A:PRO278 4.3 17.5 1.0 CA A:PHE276 4.3 14.4 1.0 N A:PRO275 4.4 23.7 1.0 N A:LYS277 4.4 13.4 1.0 CA A:PRO275 4.5 20.3 1.0 CA A:LYS277 4.5 14.5 1.0 O A:PRO275 4.6 17.9 1.0 CB A:THR274 4.6 21.2 1.0 N A:ASP273 4.7 23.4 1.0 O A:HOH550 4.7 18.4 1.0 CA A:LEU271 4.7 19.0 1.0 CB A:LEU271 4.7 15.1 1.0 CB A:PHE276 5.0 16.6 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of Arnb Transferase From Klebsiella Aerogenes (Lattice Translocation Disorder, P21 Form)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Arnb Transferase From Klebsiella Aerogenes (Lattice Translocation Disorder, P21 Form) within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg405 b:20.6 occ:1.00 O B:HOH719 2.3 29.1 1.0 O B:PHE276 2.3 17.5 1.0 O B:THR274 2.3 17.8 1.0 O B:HOH743 2.4 23.2 1.0 O B:LEU271 2.5 16.0 1.0 C B:THR274 3.5 16.8 1.0 C B:PHE276 3.5 16.9 1.0 C B:LEU271 3.6 20.7 1.0 O B:ALA272 3.6 29.5 1.0 OG1 B:THR274 3.7 20.4 1.0 C B:ALA272 3.9 28.6 1.0 N B:PHE276 3.9 15.7 1.0 CA B:ALA272 3.9 19.9 1.0 N B:THR274 4.0 22.9 1.0 C B:PRO275 4.1 17.2 1.0 N B:ALA272 4.2 20.1 1.0 CA B:THR274 4.3 23.1 1.0 CA B:PHE276 4.3 14.5 1.0 CD B:PRO278 4.3 15.1 1.0 N B:PRO275 4.4 18.5 1.0 N B:LYS277 4.4 15.6 1.0 CA B:PRO275 4.4 18.1 1.0 CA B:LYS277 4.4 17.6 1.0 O B:PRO275 4.6 19.9 1.0 CB B:THR274 4.6 19.4 1.0 N B:ASP273 4.7 18.9 1.0 CA B:LEU271 4.8 16.0 1.0 O B:HOH581 4.8 17.6 1.0 CB B:LEU271 4.8 17.4 1.0 CB B:PHE276 5.0 14.6 1.0

L.Liu, S.Lovell, K.P.Battaile, A.Cooper. Crystal Structure of Arnb Transferase From Klebsiella Aerogenes (Lattice Translocation Disorder, P21 Form) To Be Published.