Magnesium in PDB 8suc: Nhl-2 Nhl Domain

The structure of Nhl-2 Nhl Domain, PDB code: 8suc was solved by R.N.Colson, J.A.Wilce, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.53 / 1.40
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	82.666, 82.666, 110.048, 90, 90, 90
R / Rfree (%)	16 / 17.7

The binding sites of Magnesium atom in the Nhl-2 Nhl Domain (pdb code 8suc). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the Nhl-2 Nhl Domain, PDB code: 8suc:
Jump to Magnesium binding site number: 1; 2; 3;

Magnesium binding site 1 out of 3 in the Nhl-2 Nhl Domain


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Nhl-2 Nhl Domain within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1101 b:18.8 occ:1.00 O A:ILE939 2.3 14.9 1.0 O A:HOH1430 2.3 25.3 1.0 O A:HOH1288 2.3 18.9 1.0 O A:LEU985 2.4 17.3 1.0 OD2 A:ASP896 2.4 15.6 1.0 CG A:ASP896 3.3 15.5 1.0 C A:ILE939 3.4 14.6 1.0 OD1 A:ASP896 3.4 16.8 1.0 C A:LEU985 3.5 15.6 1.0 N A:LEU985 3.6 15.7 1.0 CD A:ARG986 3.8 23.5 1.0 N A:ILE939 3.8 14.6 1.0 CA A:LEU985 4.0 15.6 1.0 O A:HOH1417 4.1 26.3 1.0 O A:VAL897 4.1 15.8 1.0 CA A:ILE939 4.2 15.0 1.0 N A:ASP940 4.4 13.9 1.0 CB A:LEU985 4.4 16.8 1.0 CG A:ARG986 4.5 19.8 1.0 CB A:ASP940 4.5 15.8 1.0 O A:HOH1381 4.5 25.8 1.0 CG2 A:ILE939 4.5 16.8 1.0 CA A:ASP940 4.6 14.1 1.0 C A:GLY984 4.6 14.7 1.0 N A:ARG986 4.6 15.7 1.0 CB A:ASP896 4.6 13.5 1.0 O A:HOH1348 4.7 28.7 1.0 CA A:GLY984 4.7 15.7 1.0 CG A:ASP940 4.8 17.2 1.0 C A:GLY938 4.9 13.8 1.0 CA A:ARG986 4.9 16.6 1.0 C A:VAL897 5.0 14.8 1.0

Magnesium binding site 2 out of 3 in the Nhl-2 Nhl Domain


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Nhl-2 Nhl Domain within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1102 b:37.5 occ:1.00 O A:HOH1450 2.3 41.1 1.0 O A:HOH1241 2.3 27.9 1.0 O A:HOH1476 2.5 34.9 1.0 O A:HOH1224 2.5 30.8 1.0 O A:HOH1566 2.5 51.5 1.0 O A:HOH1428 2.6 39.5 1.0 NE2 A:GLN743 3.7 37.5 1.0 O A:HOH1370 3.9 25.3 1.0 O A:HOH1293 4.2 30.6 1.0 O A:HOH1320 4.3 25.9 1.0 OE2 A:GLU750 4.4 21.6 1.0 O A:GLN744 4.4 16.5 1.0 O A:HOH1561 4.4 54.5 1.0 OE1 A:GLU750 4.5 20.4 1.0 MG A:MG1103 4.6 53.9 1.0 CD A:GLU750 4.9 19.0 1.0 CD A:GLN743 4.9 35.5 1.0

Magnesium binding site 3 out of 3 in the Nhl-2 Nhl Domain


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Nhl-2 Nhl Domain within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1103 b:53.9 occ:1.00 O A:HOH1414 2.3 45.0 1.0 O A:HOH1485 2.5 28.4 1.0 O A:HOH1428 2.6 39.5 1.0 O A:HOH1370 2.6 25.3 1.0 O A:HOH1561 2.7 54.5 1.0 O A:HOH1252 3.9 35.3 1.0 CA A:GLY745 4.2 15.6 1.0 OG A:SER746 4.2 20.5 1.0 N A:SER746 4.2 14.9 1.0 O A:HOH1566 4.3 51.5 1.0 O A:HOH1479 4.4 39.5 1.0 MG A:MG1102 4.6 37.5 1.0 C A:GLY745 4.6 14.0 1.0 CB A:SER746 4.7 17.4 1.0 O A:HOH1224 4.7 30.8 1.0 O A:GLN744 4.8 16.5 1.0

R.N.Colson, J.A.Wilce. Nhl-2 Nhl Domain To Be Published.