Magnesium in PDB 8szd: Crystal Structure of Yersinia Pestis Dihydrofolate Reductase at 1.25-A Resolution

Enzymatic activity of Crystal Structure of Yersinia Pestis Dihydrofolate Reductase at 1.25-A Resolution

All present enzymatic activity of Crystal Structure of Yersinia Pestis Dihydrofolate Reductase at 1.25-A Resolution:
1.5.1.3;

Protein crystallography data

The structure of Crystal Structure of Yersinia Pestis Dihydrofolate Reductase at 1.25-A Resolution, PDB code: 8szd was solved by G.X.Shaw, S.Cherry, J.E.Tropea, D.S.Waugh, X.Ji, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.29 / 1.25
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 60.257, 79.156, 64.347, 90, 90, 90
R / Rfree (%) 19.7 / 22.1

Other elements in 8szd:

The structure of Crystal Structure of Yersinia Pestis Dihydrofolate Reductase at 1.25-A Resolution also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Yersinia Pestis Dihydrofolate Reductase at 1.25-A Resolution (pdb code 8szd). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Yersinia Pestis Dihydrofolate Reductase at 1.25-A Resolution, PDB code: 8szd:

Magnesium binding site 1 out of 1 in 8szd

Go back to Magnesium Binding Sites List in 8szd
Magnesium binding site 1 out of 1 in the Crystal Structure of Yersinia Pestis Dihydrofolate Reductase at 1.25-A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Yersinia Pestis Dihydrofolate Reductase at 1.25-A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg204

b:14.3
occ:0.33
 OE1 A:GLU119 2.0 45.1 1.0
NE2 A:HIS150 2.1 30.9 1.0
CD2 A:HIS150 3.0 30.9 1.0
CE1 A:HIS150 3.1 31.7 1.0
CD A:GLU119 3.3 61.4 1.0
OE2 A:GLU119 4.0 55.8 1.0
ND1 A:HIS150 4.2 24.6 1.0
CG A:HIS150 4.2 25.3 1.0
CG A:GLU119 4.3 55.0 1.0
CB A:GLU119 4.7 34.8 1.0

Reference:

G.X.Shaw, S.Cherry, J.E.Tropea, D.S.Waugh, X.Ji. Crystal Structure of Yersinia Pestis Dihydrofolate Reductase at 1.25-A Resolution To Be Published.
Page generated: Fri Oct 4 20:17:20 2024

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