Magnesium in PDB 8szq: Cat DHX9 Bound to Adp

The structure of Cat DHX9 Bound to Adp, PDB code: 8szq was solved by Y.-T.Lee, E.A.Sickmier, S.Grigoriu, P.A.Boriack-Sjodin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.17 / 2.71
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	86.01, 86.01, 348.85, 90, 90, 90
R / Rfree (%)	22.6 / 27.4

The binding sites of Magnesium atom in the Cat DHX9 Bound to Adp (pdb code 8szq). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cat DHX9 Bound to Adp, PDB code: 8szq:

Magnesium binding site 1 out of 1 in the Cat DHX9 Bound to Adp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cat DHX9 Bound to Adp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1302 b:57.6 occ:1.00 OG1 A:THR419 2.0 57.1 1.0 O A:HOH1410 2.0 53.5 1.0 O A:HOH1409 2.0 58.7 1.0 O A:HOH1401 2.0 48.7 1.0 O3B A:ADP1301 2.0 55.7 1.0 OE2 A:GLU513 2.0 64.4 1.0 CD A:GLU513 3.0 66.9 1.0 CB A:THR419 3.3 58.2 1.0 PB A:ADP1301 3.3 53.1 1.0 OE1 A:GLU513 3.4 70.6 1.0 OD2 A:ASP512 3.6 57.7 1.0 OD1 A:ASP512 3.8 55.1 1.0 O2B A:ADP1301 3.8 52.6 1.0 N A:THR419 4.1 58.0 1.0 CG A:ASP512 4.1 56.5 1.0 CA A:THR419 4.2 57.6 1.0 O1B A:ADP1301 4.2 51.4 1.0 CG2 A:THR419 4.2 59.4 1.0 O2A A:ADP1301 4.3 57.2 1.0 O A:THR719 4.3 65.5 1.0 O A:SER720 4.3 65.8 1.0 CG A:GLU513 4.3 63.5 1.0 O A:HOH1416 4.4 61.5 1.0 O3A A:ADP1301 4.4 53.5 1.0 CE A:LYS418 4.7 58.8 1.0 CB A:LYS418 4.8 59.2 1.0 PA A:ADP1301 4.9 54.8 1.0 NZ A:LYS418 4.9 59.4 1.0 CA A:SER720 5.0 66.1 1.0 C A:SER720 5.0 66.6 1.0

Y.-T.Lee, E.A.Sickmier, J.Castro, S.Grigoriu, P.A.Boriack-Sjodin. Crystal Structures of Dexh-Box Rna Helicase DHX9 To Be Published.