Magnesium in PDB 8t5u: Atp-1 State of BCS1 (C7 Symmetrized)
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Atp-1 State of BCS1 (C7 Symmetrized)
(pdb code 8t5u). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 7 binding sites of Magnesium where determined in the
Atp-1 State of BCS1 (C7 Symmetrized), PDB code: 8t5u:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
Magnesium binding site 1 out
of 7 in 8t5u
Go back to
Magnesium Binding Sites List in 8t5u
Magnesium binding site 1 out
of 7 in the Atp-1 State of BCS1 (C7 Symmetrized)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Atp-1 State of BCS1 (C7 Symmetrized) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg701
b:88.8
occ:1.00
|
O3G
|
A:ATP702
|
2.1
|
129.2
|
1.0
|
OG
|
A:SER237
|
2.1
|
124.3
|
1.0
|
O2B
|
A:ATP702
|
2.7
|
132.3
|
1.0
|
CB
|
A:SER237
|
2.8
|
119.4
|
1.0
|
O1A
|
A:ATP702
|
3.2
|
138.5
|
1.0
|
PG
|
A:ATP702
|
3.3
|
140.2
|
1.0
|
O3B
|
A:ATP702
|
3.4
|
134.4
|
1.0
|
PB
|
A:ATP702
|
3.6
|
136.1
|
1.0
|
N
|
A:SER237
|
3.8
|
112.8
|
1.0
|
CA
|
A:SER237
|
3.9
|
114.2
|
1.0
|
PA
|
A:ATP702
|
4.0
|
138.5
|
1.0
|
O3A
|
A:ATP702
|
4.0
|
130.9
|
1.0
|
O2G
|
A:ATP702
|
4.2
|
134.2
|
1.0
|
O2A
|
A:ATP702
|
4.3
|
135.5
|
1.0
|
O1G
|
A:ATP702
|
4.4
|
136.9
|
1.0
|
OE1
|
A:GLU282
|
4.5
|
183.0
|
1.0
|
O
|
B:ASP317
|
4.7
|
144.3
|
1.0
|
NH2
|
B:ARG343
|
4.9
|
121.8
|
1.0
|
O1B
|
A:ATP702
|
4.9
|
135.0
|
1.0
|
|
Magnesium binding site 2 out
of 7 in 8t5u
Go back to
Magnesium Binding Sites List in 8t5u
Magnesium binding site 2 out
of 7 in the Atp-1 State of BCS1 (C7 Symmetrized)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Atp-1 State of BCS1 (C7 Symmetrized) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg701
b:92.2
occ:1.00
|
O3G
|
B:ATP702
|
2.1
|
134.8
|
1.0
|
OG
|
B:SER237
|
2.4
|
133.6
|
1.0
|
O2B
|
B:ATP702
|
2.6
|
136.6
|
1.0
|
CB
|
B:SER237
|
2.8
|
129.9
|
1.0
|
O1A
|
B:ATP702
|
3.2
|
141.6
|
1.0
|
PG
|
B:ATP702
|
3.3
|
143.1
|
1.0
|
O3B
|
B:ATP702
|
3.3
|
138.9
|
1.0
|
PB
|
B:ATP702
|
3.6
|
142.7
|
1.0
|
N
|
B:SER237
|
3.8
|
126.1
|
1.0
|
CA
|
B:SER237
|
3.9
|
126.0
|
1.0
|
PA
|
B:ATP702
|
4.0
|
143.0
|
1.0
|
O3A
|
B:ATP702
|
4.0
|
137.8
|
1.0
|
O2G
|
B:ATP702
|
4.2
|
132.2
|
1.0
|
O1G
|
B:ATP702
|
4.4
|
139.2
|
1.0
|
O2A
|
B:ATP702
|
4.4
|
139.7
|
1.0
|
O
|
C:ASP317
|
4.7
|
141.0
|
1.0
|
NH2
|
C:ARG343
|
4.8
|
120.8
|
1.0
|
OE1
|
B:GLU282
|
4.8
|
178.2
|
1.0
|
O1B
|
B:ATP702
|
4.9
|
135.3
|
1.0
|
|
Magnesium binding site 3 out
of 7 in 8t5u
Go back to
Magnesium Binding Sites List in 8t5u
Magnesium binding site 3 out
of 7 in the Atp-1 State of BCS1 (C7 Symmetrized)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Atp-1 State of BCS1 (C7 Symmetrized) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg701
b:87.3
occ:1.00
|
O3G
|
C:ATP702
|
2.1
|
128.5
|
1.0
|
OG
|
C:SER237
|
2.2
|
118.3
|
1.0
|
O2B
|
C:ATP702
|
2.7
|
134.3
|
1.0
|
CB
|
C:SER237
|
2.8
|
118.3
|
1.0
|
O1A
|
C:ATP702
|
3.2
|
141.6
|
1.0
|
PG
|
C:ATP702
|
3.3
|
140.6
|
1.0
|
O3B
|
C:ATP702
|
3.4
|
135.5
|
1.0
|
PB
|
C:ATP702
|
3.6
|
136.4
|
1.0
|
N
|
C:SER237
|
3.9
|
112.3
|
1.0
|
CA
|
C:SER237
|
4.0
|
113.6
|
1.0
|
PA
|
C:ATP702
|
4.0
|
141.0
|
1.0
|
O3A
|
C:ATP702
|
4.1
|
132.0
|
1.0
|
O2G
|
C:ATP702
|
4.2
|
133.5
|
1.0
|
O1G
|
C:ATP702
|
4.3
|
139.4
|
1.0
|
O2A
|
C:ATP702
|
4.4
|
137.3
|
1.0
|
O
|
D:ASP317
|
4.6
|
152.2
|
1.0
|
OE2
|
C:GLU282
|
4.8
|
176.9
|
1.0
|
NH2
|
D:ARG343
|
4.8
|
131.0
|
1.0
|
O1B
|
C:ATP702
|
4.9
|
133.9
|
1.0
|
|
Magnesium binding site 4 out
of 7 in 8t5u
Go back to
Magnesium Binding Sites List in 8t5u
Magnesium binding site 4 out
of 7 in the Atp-1 State of BCS1 (C7 Symmetrized)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Atp-1 State of BCS1 (C7 Symmetrized) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg701
b:105.9
occ:1.00
|
O3G
|
D:ATP702
|
2.0
|
142.2
|
1.0
|
OG
|
D:SER237
|
2.0
|
135.6
|
1.0
|
O2B
|
D:ATP702
|
2.7
|
148.6
|
1.0
|
CB
|
D:SER237
|
3.0
|
134.7
|
1.0
|
O1A
|
D:ATP702
|
3.1
|
150.3
|
1.0
|
PG
|
D:ATP702
|
3.2
|
151.9
|
1.0
|
O3B
|
D:ATP702
|
3.3
|
148.0
|
1.0
|
PB
|
D:ATP702
|
3.5
|
152.4
|
1.0
|
PA
|
D:ATP702
|
4.0
|
150.7
|
1.0
|
O3A
|
D:ATP702
|
4.0
|
143.8
|
1.0
|
N
|
D:SER237
|
4.0
|
132.8
|
1.0
|
O2G
|
D:ATP702
|
4.1
|
142.9
|
1.0
|
CA
|
D:SER237
|
4.1
|
132.4
|
1.0
|
O1G
|
D:ATP702
|
4.3
|
148.7
|
1.0
|
O2A
|
D:ATP702
|
4.4
|
147.3
|
1.0
|
O
|
E:ASP317
|
4.6
|
153.7
|
1.0
|
NH2
|
E:ARG343
|
4.7
|
132.9
|
1.0
|
O1B
|
D:ATP702
|
4.9
|
144.9
|
1.0
|
OE2
|
D:GLU282
|
5.0
|
180.7
|
1.0
|
|
Magnesium binding site 5 out
of 7 in 8t5u
Go back to
Magnesium Binding Sites List in 8t5u
Magnesium binding site 5 out
of 7 in the Atp-1 State of BCS1 (C7 Symmetrized)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Atp-1 State of BCS1 (C7 Symmetrized) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg701
b:105.6
occ:1.00
|
O3G
|
E:ATP702
|
2.0
|
143.5
|
1.0
|
OG
|
E:SER237
|
2.1
|
139.6
|
1.0
|
O2B
|
E:ATP702
|
2.6
|
148.7
|
1.0
|
CB
|
E:SER237
|
2.9
|
138.3
|
1.0
|
O1A
|
E:ATP702
|
3.2
|
151.3
|
1.0
|
PG
|
E:ATP702
|
3.2
|
151.5
|
1.0
|
O3B
|
E:ATP702
|
3.3
|
147.3
|
1.0
|
PB
|
E:ATP702
|
3.5
|
152.3
|
1.0
|
N
|
E:SER237
|
3.9
|
135.7
|
1.0
|
PA
|
E:ATP702
|
4.0
|
151.5
|
1.0
|
O3A
|
E:ATP702
|
4.0
|
145.6
|
1.0
|
CA
|
E:SER237
|
4.0
|
135.2
|
1.0
|
O2G
|
E:ATP702
|
4.1
|
145.5
|
1.0
|
O1G
|
E:ATP702
|
4.3
|
148.8
|
1.0
|
O2A
|
E:ATP702
|
4.4
|
150.5
|
1.0
|
OE2
|
E:GLU282
|
4.6
|
181.0
|
1.0
|
O
|
F:ASP317
|
4.7
|
153.2
|
1.0
|
NH2
|
F:ARG343
|
4.8
|
133.0
|
1.0
|
O1B
|
E:ATP702
|
4.9
|
145.3
|
1.0
|
|
Magnesium binding site 6 out
of 7 in 8t5u
Go back to
Magnesium Binding Sites List in 8t5u
Magnesium binding site 6 out
of 7 in the Atp-1 State of BCS1 (C7 Symmetrized)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Atp-1 State of BCS1 (C7 Symmetrized) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Mg701
b:109.7
occ:1.00
|
O3G
|
F:ATP702
|
2.0
|
143.7
|
1.0
|
OG
|
F:SER237
|
2.0
|
137.7
|
1.0
|
O2B
|
F:ATP702
|
2.7
|
147.8
|
1.0
|
CB
|
F:SER237
|
3.0
|
136.1
|
1.0
|
O1A
|
F:ATP702
|
3.2
|
152.3
|
1.0
|
PG
|
F:ATP702
|
3.2
|
151.1
|
1.0
|
O3B
|
F:ATP702
|
3.3
|
147.2
|
1.0
|
PB
|
F:ATP702
|
3.6
|
151.5
|
1.0
|
O3A
|
F:ATP702
|
4.0
|
143.6
|
1.0
|
PA
|
F:ATP702
|
4.0
|
151.1
|
1.0
|
N
|
F:SER237
|
4.1
|
131.7
|
1.0
|
CA
|
F:SER237
|
4.2
|
132.7
|
1.0
|
O2G
|
F:ATP702
|
4.2
|
144.0
|
1.0
|
O1G
|
F:ATP702
|
4.3
|
148.4
|
1.0
|
O2A
|
F:ATP702
|
4.5
|
148.4
|
1.0
|
O
|
G:ASP317
|
4.5
|
150.7
|
1.0
|
NH2
|
G:ARG343
|
4.7
|
126.8
|
1.0
|
OE2
|
F:GLU282
|
4.8
|
184.1
|
1.0
|
O1B
|
F:ATP702
|
4.9
|
145.5
|
1.0
|
CA
|
G:GLY318
|
5.0
|
152.6
|
1.0
|
|
Magnesium binding site 7 out
of 7 in 8t5u
Go back to
Magnesium Binding Sites List in 8t5u
Magnesium binding site 7 out
of 7 in the Atp-1 State of BCS1 (C7 Symmetrized)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Atp-1 State of BCS1 (C7 Symmetrized) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Mg701
b:81.6
occ:1.00
|
O3G
|
G:ATP702
|
2.1
|
123.4
|
1.0
|
OG
|
G:SER237
|
2.2
|
135.2
|
1.0
|
O2B
|
G:ATP702
|
2.7
|
132.7
|
1.0
|
CB
|
G:SER237
|
2.8
|
132.9
|
1.0
|
O1A
|
G:ATP702
|
3.2
|
130.5
|
1.0
|
PG
|
G:ATP702
|
3.3
|
136.1
|
1.0
|
O3B
|
G:ATP702
|
3.3
|
128.3
|
1.0
|
PB
|
G:ATP702
|
3.6
|
131.1
|
1.0
|
N
|
G:SER237
|
3.8
|
131.1
|
1.0
|
CA
|
G:SER237
|
3.9
|
129.3
|
1.0
|
PA
|
G:ATP702
|
4.0
|
138.9
|
1.0
|
O3A
|
G:ATP702
|
4.0
|
130.8
|
1.0
|
O2G
|
G:ATP702
|
4.2
|
129.1
|
1.0
|
O2A
|
G:ATP702
|
4.3
|
134.8
|
1.0
|
O1G
|
G:ATP702
|
4.4
|
135.0
|
1.0
|
O
|
A:ASP317
|
4.7
|
142.2
|
1.0
|
OE2
|
G:GLU282
|
4.7
|
183.2
|
1.0
|
NH2
|
A:ARG343
|
4.8
|
121.8
|
1.0
|
O1B
|
G:ATP702
|
4.9
|
126.3
|
1.0
|
|
Reference:
J.Zhan,
D.Xia.
Concerted BCS1 Translocation Mechanism To Be Published.
Page generated: Fri Oct 4 20:20:29 2024
|