Magnesium in PDB 8t5u: Atp-1 State of BCS1 (C7 Symmetrized)

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Atp-1 State of BCS1 (C7 Symmetrized) (pdb code 8t5u). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 7 binding sites of Magnesium where determined in the Atp-1 State of BCS1 (C7 Symmetrized), PDB code: 8t5u:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7;

Magnesium binding site 1 out of 7 in 8t5u

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Magnesium binding site 1 out of 7 in the Atp-1 State of BCS1 (C7 Symmetrized)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Atp-1 State of BCS1 (C7 Symmetrized) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg701

b:88.8
occ:1.00
 O3G A:ATP702 2.1 129.2 1.0
OG A:SER237 2.1 124.3 1.0
O2B A:ATP702 2.7 132.3 1.0
CB A:SER237 2.8 119.4 1.0
O1A A:ATP702 3.2 138.5 1.0
PG A:ATP702 3.3 140.2 1.0
O3B A:ATP702 3.4 134.4 1.0
PB A:ATP702 3.6 136.1 1.0
N A:SER237 3.8 112.8 1.0
CA A:SER237 3.9 114.2 1.0
PA A:ATP702 4.0 138.5 1.0
O3A A:ATP702 4.0 130.9 1.0
O2G A:ATP702 4.2 134.2 1.0
O2A A:ATP702 4.3 135.5 1.0
O1G A:ATP702 4.4 136.9 1.0
OE1 A:GLU282 4.5 183.0 1.0
O B:ASP317 4.7 144.3 1.0
NH2 B:ARG343 4.9 121.8 1.0
O1B A:ATP702 4.9 135.0 1.0

Magnesium binding site 2 out of 7 in 8t5u

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Magnesium binding site 2 out of 7 in the Atp-1 State of BCS1 (C7 Symmetrized)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Atp-1 State of BCS1 (C7 Symmetrized) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg701

b:92.2
occ:1.00
 O3G B:ATP702 2.1 134.8 1.0
OG B:SER237 2.4 133.6 1.0
O2B B:ATP702 2.6 136.6 1.0
CB B:SER237 2.8 129.9 1.0
O1A B:ATP702 3.2 141.6 1.0
PG B:ATP702 3.3 143.1 1.0
O3B B:ATP702 3.3 138.9 1.0
PB B:ATP702 3.6 142.7 1.0
N B:SER237 3.8 126.1 1.0
CA B:SER237 3.9 126.0 1.0
PA B:ATP702 4.0 143.0 1.0
O3A B:ATP702 4.0 137.8 1.0
O2G B:ATP702 4.2 132.2 1.0
O1G B:ATP702 4.4 139.2 1.0
O2A B:ATP702 4.4 139.7 1.0
O C:ASP317 4.7 141.0 1.0
NH2 C:ARG343 4.8 120.8 1.0
OE1 B:GLU282 4.8 178.2 1.0
O1B B:ATP702 4.9 135.3 1.0

Magnesium binding site 3 out of 7 in 8t5u

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Magnesium binding site 3 out of 7 in the Atp-1 State of BCS1 (C7 Symmetrized)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Atp-1 State of BCS1 (C7 Symmetrized) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg701

b:87.3
occ:1.00
 O3G C:ATP702 2.1 128.5 1.0
OG C:SER237 2.2 118.3 1.0
O2B C:ATP702 2.7 134.3 1.0
CB C:SER237 2.8 118.3 1.0
O1A C:ATP702 3.2 141.6 1.0
PG C:ATP702 3.3 140.6 1.0
O3B C:ATP702 3.4 135.5 1.0
PB C:ATP702 3.6 136.4 1.0
N C:SER237 3.9 112.3 1.0
CA C:SER237 4.0 113.6 1.0
PA C:ATP702 4.0 141.0 1.0
O3A C:ATP702 4.1 132.0 1.0
O2G C:ATP702 4.2 133.5 1.0
O1G C:ATP702 4.3 139.4 1.0
O2A C:ATP702 4.4 137.3 1.0
O D:ASP317 4.6 152.2 1.0
OE2 C:GLU282 4.8 176.9 1.0
NH2 D:ARG343 4.8 131.0 1.0
O1B C:ATP702 4.9 133.9 1.0

Magnesium binding site 4 out of 7 in 8t5u

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Magnesium binding site 4 out of 7 in the Atp-1 State of BCS1 (C7 Symmetrized)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Atp-1 State of BCS1 (C7 Symmetrized) within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg701

b:105.9
occ:1.00
 O3G D:ATP702 2.0 142.2 1.0
OG D:SER237 2.0 135.6 1.0
O2B D:ATP702 2.7 148.6 1.0
CB D:SER237 3.0 134.7 1.0
O1A D:ATP702 3.1 150.3 1.0
PG D:ATP702 3.2 151.9 1.0
O3B D:ATP702 3.3 148.0 1.0
PB D:ATP702 3.5 152.4 1.0
PA D:ATP702 4.0 150.7 1.0
O3A D:ATP702 4.0 143.8 1.0
N D:SER237 4.0 132.8 1.0
O2G D:ATP702 4.1 142.9 1.0
CA D:SER237 4.1 132.4 1.0
O1G D:ATP702 4.3 148.7 1.0
O2A D:ATP702 4.4 147.3 1.0
O E:ASP317 4.6 153.7 1.0
NH2 E:ARG343 4.7 132.9 1.0
O1B D:ATP702 4.9 144.9 1.0
OE2 D:GLU282 5.0 180.7 1.0

Magnesium binding site 5 out of 7 in 8t5u

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Magnesium binding site 5 out of 7 in the Atp-1 State of BCS1 (C7 Symmetrized)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Atp-1 State of BCS1 (C7 Symmetrized) within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg701

b:105.6
occ:1.00
 O3G E:ATP702 2.0 143.5 1.0
OG E:SER237 2.1 139.6 1.0
O2B E:ATP702 2.6 148.7 1.0
CB E:SER237 2.9 138.3 1.0
O1A E:ATP702 3.2 151.3 1.0
PG E:ATP702 3.2 151.5 1.0
O3B E:ATP702 3.3 147.3 1.0
PB E:ATP702 3.5 152.3 1.0
N E:SER237 3.9 135.7 1.0
PA E:ATP702 4.0 151.5 1.0
O3A E:ATP702 4.0 145.6 1.0
CA E:SER237 4.0 135.2 1.0
O2G E:ATP702 4.1 145.5 1.0
O1G E:ATP702 4.3 148.8 1.0
O2A E:ATP702 4.4 150.5 1.0
OE2 E:GLU282 4.6 181.0 1.0
O F:ASP317 4.7 153.2 1.0
NH2 F:ARG343 4.8 133.0 1.0
O1B E:ATP702 4.9 145.3 1.0

Magnesium binding site 6 out of 7 in 8t5u

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Magnesium binding site 6 out of 7 in the Atp-1 State of BCS1 (C7 Symmetrized)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Atp-1 State of BCS1 (C7 Symmetrized) within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Mg701

b:109.7
occ:1.00
 O3G F:ATP702 2.0 143.7 1.0
OG F:SER237 2.0 137.7 1.0
O2B F:ATP702 2.7 147.8 1.0
CB F:SER237 3.0 136.1 1.0
O1A F:ATP702 3.2 152.3 1.0
PG F:ATP702 3.2 151.1 1.0
O3B F:ATP702 3.3 147.2 1.0
PB F:ATP702 3.6 151.5 1.0
O3A F:ATP702 4.0 143.6 1.0
PA F:ATP702 4.0 151.1 1.0
N F:SER237 4.1 131.7 1.0
CA F:SER237 4.2 132.7 1.0
O2G F:ATP702 4.2 144.0 1.0
O1G F:ATP702 4.3 148.4 1.0
O2A F:ATP702 4.5 148.4 1.0
O G:ASP317 4.5 150.7 1.0
NH2 G:ARG343 4.7 126.8 1.0
OE2 F:GLU282 4.8 184.1 1.0
O1B F:ATP702 4.9 145.5 1.0
CA G:GLY318 5.0 152.6 1.0

Magnesium binding site 7 out of 7 in 8t5u

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Magnesium binding site 7 out of 7 in the Atp-1 State of BCS1 (C7 Symmetrized)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Atp-1 State of BCS1 (C7 Symmetrized) within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Mg701

b:81.6
occ:1.00
 O3G G:ATP702 2.1 123.4 1.0
OG G:SER237 2.2 135.2 1.0
O2B G:ATP702 2.7 132.7 1.0
CB G:SER237 2.8 132.9 1.0
O1A G:ATP702 3.2 130.5 1.0
PG G:ATP702 3.3 136.1 1.0
O3B G:ATP702 3.3 128.3 1.0
PB G:ATP702 3.6 131.1 1.0
N G:SER237 3.8 131.1 1.0
CA G:SER237 3.9 129.3 1.0
PA G:ATP702 4.0 138.9 1.0
O3A G:ATP702 4.0 130.8 1.0
O2G G:ATP702 4.2 129.1 1.0
O2A G:ATP702 4.3 134.8 1.0
O1G G:ATP702 4.4 135.0 1.0
O A:ASP317 4.7 142.2 1.0
OE2 G:GLU282 4.7 183.2 1.0
NH2 A:ARG343 4.8 121.8 1.0
O1B G:ATP702 4.9 126.3 1.0

Reference:

J.Zhan, D.Xia. Concerted BCS1 Translocation Mechanism To Be Published.
Page generated: Fri Oct 4 20:20:29 2024

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