Magnesium in PDB 8tah: Cryo-Em Structure of Cortactin-Bound to ARP2/3 Complex

The binding sites of Magnesium atom in the Cryo-Em Structure of Cortactin-Bound to ARP2/3 Complex (pdb code 8tah). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Cryo-Em Structure of Cortactin-Bound to ARP2/3 Complex, PDB code: 8tah:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Cryo-Em Structure of Cortactin-Bound to ARP2/3 Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Cortactin-Bound to ARP2/3 Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:89.1 occ:1.00 O2B A:ATP502 2.0 135.1 1.0 O1G A:ATP502 2.1 145.1 1.0 CG2 A:THR14 3.3 120.0 1.0 PG A:ATP502 3.3 161.6 1.0 PB A:ATP502 3.3 133.1 1.0 O3B A:ATP502 3.5 144.0 1.0 N A:ASP172 4.1 143.5 1.0 N A:THR14 4.2 114.8 1.0 O1B A:ATP502 4.2 139.2 1.0 O2G A:ATP502 4.2 142.5 1.0 O3A A:ATP502 4.4 134.9 1.0 O3G A:ATP502 4.4 146.9 1.0 CB A:THR14 4.4 117.9 1.0 CA A:GLY171 4.5 131.9 1.0 OG1 A:THR14 4.5 129.8 1.0 C A:GLY171 4.9 132.5 1.0 CA A:GLY13 4.9 119.3 1.0 N A:GLY171 4.9 131.4 1.0 C A:ASP172 4.9 143.0 1.0 CA A:THR14 4.9 116.7 1.0

Magnesium binding site 2 out of 2 in the Cryo-Em Structure of Cortactin-Bound to ARP2/3 Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryo-Em Structure of Cortactin-Bound to ARP2/3 Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg501 b:142.3 occ:1.00 O2G B:ATP502 2.3 159.0 1.0 O1B B:ATP502 2.4 152.6 1.0 O3B B:ATP502 3.1 159.8 1.0 PG B:ATP502 3.2 171.9 1.0 PB B:ATP502 3.3 160.8 1.0 O1A B:ATP502 3.7 151.8 1.0 O1G B:ATP502 3.9 158.7 1.0 O3A B:ATP502 4.2 152.2 1.0 OD2 B:ASP158 4.5 148.2 1.0 O3G B:ATP502 4.5 156.2 1.0 O2B B:ATP502 4.5 151.0 1.0 PA B:ATP502 4.5 158.1 1.0 OD1 B:ASP158 4.7 144.5 1.0 OE1 B:GLN141 4.7 175.3 1.0

F.E.Fregoso, P.J.Carman, M.Boczkowska, G.Rebowski, T.Van Eeuwen, R.Dominguez. Mechanism of Synergistic Activation of ARP2/3 Complex By Cortactin and Wasp-Family Proteins To Be Published.