Magnesium in PDB 8txm: Crystal Structure of 05.Gc.W13.02 Fab in Complex with H1 Ha From A/California/04/2009(H1N1)

The structure of Crystal Structure of 05.Gc.W13.02 Fab in Complex with H1 Ha From A/California/04/2009(H1N1), PDB code: 8txm was solved by T.H.Lin, N.Moore, I.A.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.77 / 3.25
Space group	P 21 3
Cell size a, b, c (Å), α, β, γ (°)	167.531, 167.531, 167.531, 90, 90, 90
R / Rfree (%)	27.5 / 28.7

The binding sites of Magnesium atom in the Crystal Structure of 05.Gc.W13.02 Fab in Complex with H1 Ha From A/California/04/2009(H1N1) (pdb code 8txm). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of 05.Gc.W13.02 Fab in Complex with H1 Ha From A/California/04/2009(H1N1), PDB code: 8txm:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of 05.Gc.W13.02 Fab in Complex with H1 Ha From A/California/04/2009(H1N1)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of 05.Gc.W13.02 Fab in Complex with H1 Ha From A/California/04/2009(H1N1) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:87.0 occ:1.00 NE2 A:HIS275 2.1 92.8 1.0 CD2 A:HIS275 2.8 84.5 1.0 CE1 A:HIS275 3.0 83.4 1.0 CG A:HIS275 3.8 82.6 1.0 ND1 A:HIS275 3.9 81.2 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of 05.Gc.W13.02 Fab in Complex with H1 Ha From A/California/04/2009(H1N1)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of 05.Gc.W13.02 Fab in Complex with H1 Ha From A/California/04/2009(H1N1) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg403 b:66.4 occ:1.00 NE2 A:HIS38 2.3 66.8 1.0 CE1 A:HIS38 2.3 67.8 1.0 NE2 A:HIS18 2.7 72.2 1.0 CE1 A:HIS18 3.3 73.1 1.0 CD2 A:HIS18 3.4 71.7 1.0 ND1 A:HIS38 3.6 72.9 1.0 CD2 A:HIS38 3.7 65.7 1.0 ND2 A:ASN20 4.1 71.7 1.0 ND1 A:HIS18 4.3 75.9 1.0 CG A:HIS38 4.3 68.6 1.0 CD2 H:LEU54 4.3 92.4 1.0 CG A:HIS18 4.3 73.8 1.0 NE1 B:TRP21 4.6 63.8 1.0 CG H:LEU54 4.7 67.2 1.0 CG A:ASN20 4.8 70.7 1.0 CD1 B:TRP21 4.9 64.7 1.0

T.H.Lin, N.Moore, I.A.Wilson, A.H.Ellebedy, S.H.Kleinstein, A.B.Ward, J.S.Turner, F.Krammer, P.M.Presti, S.A.Teefey, W.D.Middleton, T.Suessen, K.Hoehn, A.J.Schmitz, J.Q.Zhou, B.M.Mohammed, S.K.Msllsdi, M.Wnag, M.Mcmahon, J.Han, W.Kim, H.Meng, K.M.Mcintire. Maturation of Germinal Center B Cells After Influenza Vaccination in Humans J.Exp.Med. 2024.
ISSN: ESSN 1540-9538
DOI: 10.1084/JEM.20240668