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Magnesium in PDB 8tzj: Cryo-Em Structure of Vibrio Cholerae Ftse/Ftsx Complex

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryo-Em Structure of Vibrio Cholerae Ftse/Ftsx Complex (pdb code 8tzj). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Cryo-Em Structure of Vibrio Cholerae Ftse/Ftsx Complex, PDB code: 8tzj:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 8tzj

Go back to Magnesium Binding Sites List in 8tzj
Magnesium binding site 1 out of 2 in the Cryo-Em Structure of Vibrio Cholerae Ftse/Ftsx Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Vibrio Cholerae Ftse/Ftsx Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg301

b:58.2
occ:1.00
OG A:SER51 2.2 61.5 1.0
O1B A:ADP302 2.2 30.0 1.0
HB2 A:SER51 3.1 61.5 1.0
CB A:SER51 3.2 61.5 1.0
PB A:ADP302 3.6 30.0 1.0
HB3 A:SER51 3.7 61.5 1.0
O2B A:ADP302 4.1 30.0 1.0
OD2 A:ASP171 4.2 65.3 1.0
O1A A:ADP302 4.2 30.0 1.0
H A:SER51 4.3 61.5 1.0
OD1 A:ASP171 4.4 65.3 1.0
O3B A:ADP302 4.4 30.0 1.0
CA A:SER51 4.4 61.5 1.0
HA A:SER51 4.6 61.5 1.0
N A:SER51 4.7 61.5 1.0
CG A:ASP171 4.7 65.3 1.0
HZ1 A:LYS50 4.8 66.8 1.0
O3A A:ADP302 4.8 30.0 1.0
HZ3 A:LYS50 5.0 66.8 1.0

Magnesium binding site 2 out of 2 in 8tzj

Go back to Magnesium Binding Sites List in 8tzj
Magnesium binding site 2 out of 2 in the Cryo-Em Structure of Vibrio Cholerae Ftse/Ftsx Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryo-Em Structure of Vibrio Cholerae Ftse/Ftsx Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg301

b:58.2
occ:1.00
O1B B:ADP302 2.4 30.0 1.0
OG B:SER51 2.7 61.5 1.0
HG B:SER51 3.2 61.5 1.0
PB B:ADP302 3.4 30.0 1.0
O2B B:ADP302 3.6 30.0 1.0
HB2 B:SER51 3.7 61.5 1.0
HZ1 B:LYS50 3.8 66.8 1.0
CB B:SER51 3.8 61.5 1.0
O3B B:ADP302 3.9 30.0 1.0
OD1 B:ASP171 4.0 65.3 1.0
HZ3 B:LYS50 4.1 66.8 1.0
H B:SER51 4.2 61.5 1.0
NZ B:LYS50 4.3 66.8 1.0
OD2 B:ASP171 4.4 65.3 1.0
HB3 B:SER51 4.5 61.5 1.0
HE2 B:LYS50 4.6 66.8 1.0
HB2 B:LYS50 4.6 66.8 1.0
CG B:ASP171 4.6 65.3 1.0
N B:SER51 4.7 61.5 1.0
CA B:SER51 4.7 61.5 1.0
HA B:SER51 4.8 61.5 1.0
O1A B:ADP302 4.9 30.0 1.0
O3A B:ADP302 4.9 30.0 1.0

Reference:

A.Hao, Y.Suo, S.Y.Lee. Structural Insights Into the Ftsex-Envc Complex Regulation on Septal Peptidoglycan Hydrolysis in Vibrio Cholerae. Structure 2023.
ISSN: ISSN 0969-2126
PubMed: 38070498
DOI: 10.1016/J.STR.2023.11.007
Page generated: Thu Dec 28 10:33:38 2023

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