Magnesium in PDB 8umi: Consensus Map of Picdeltatfiik FORM1
Enzymatic activity of Consensus Map of Picdeltatfiik FORM1
All present enzymatic activity of Consensus Map of Picdeltatfiik FORM1:
2.7.7.6;
3.6.4.12;
Other elements in 8umi:
The structure of Consensus Map of Picdeltatfiik FORM1 also contains other interesting chemical elements:
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Consensus Map of Picdeltatfiik FORM1
(pdb code 8umi). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the
Consensus Map of Picdeltatfiik FORM1, PDB code: 8umi:
Jump to Magnesium binding site number:
1;
2;
Magnesium binding site 1 out
of 2 in 8umi
Go back to
Magnesium Binding Sites List in 8umi
Magnesium binding site 1 out
of 2 in the Consensus Map of Picdeltatfiik FORM1
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Consensus Map of Picdeltatfiik FORM1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
7:Mg901
b:244.1
occ:1.00
|
N
|
7:SER655
|
2.2
|
298.9
|
1.0
|
OG
|
7:SER655
|
2.3
|
298.9
|
1.0
|
C
|
7:SER655
|
2.5
|
298.9
|
1.0
|
CA
|
7:SER655
|
2.6
|
298.9
|
1.0
|
CG2
|
7:VAL657
|
2.6
|
321.1
|
1.0
|
O
|
7:SER655
|
2.7
|
298.9
|
1.0
|
CB
|
7:SER655
|
2.8
|
298.9
|
1.0
|
N
|
7:GLY658
|
2.9
|
330.1
|
1.0
|
N
|
7:VAL657
|
3.0
|
321.1
|
1.0
|
N
|
7:LYS656
|
3.3
|
316.7
|
1.0
|
C
|
7:LEU654
|
3.4
|
300.9
|
1.0
|
O
|
7:ILE627
|
3.5
|
295.8
|
1.0
|
CA
|
7:VAL657
|
3.6
|
321.1
|
1.0
|
C
|
7:VAL657
|
3.6
|
321.1
|
1.0
|
CB
|
7:VAL657
|
3.6
|
321.1
|
1.0
|
CA
|
7:GLY658
|
3.9
|
330.1
|
1.0
|
CA
|
7:LEU654
|
3.9
|
300.9
|
1.0
|
C
|
7:LYS656
|
4.0
|
316.7
|
1.0
|
CA
|
7:TYR628
|
4.0
|
322.8
|
1.0
|
CB
|
7:LEU654
|
4.1
|
300.9
|
1.0
|
CA
|
7:LYS656
|
4.2
|
316.7
|
1.0
|
C
|
7:ILE627
|
4.2
|
295.8
|
1.0
|
CD2
|
7:LEU654
|
4.3
|
300.9
|
1.0
|
O
|
7:LEU654
|
4.4
|
300.9
|
1.0
|
C
|
7:TYR628
|
4.5
|
322.8
|
1.0
|
N
|
7:TYR628
|
4.5
|
322.8
|
1.0
|
CG1
|
7:VAL657
|
4.5
|
321.1
|
1.0
|
CG2
|
7:ILE627
|
4.5
|
295.8
|
1.0
|
O
|
7:VAL657
|
4.7
|
321.1
|
1.0
|
CG
|
7:LEU654
|
4.8
|
300.9
|
1.0
|
N
|
7:GLY629
|
4.9
|
337.9
|
1.0
|
O
|
7:TYR628
|
4.9
|
322.8
|
1.0
|
C
|
7:GLY658
|
4.9
|
330.1
|
1.0
|
|
Magnesium binding site 2 out
of 2 in 8umi
Go back to
Magnesium Binding Sites List in 8umi
Magnesium binding site 2 out
of 2 in the Consensus Map of Picdeltatfiik FORM1
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Consensus Map of Picdeltatfiik FORM1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg1803
b:129.6
occ:1.00
|
N
|
A:GLY1395
|
2.1
|
58.9
|
1.0
|
C
|
A:THR1394
|
2.4
|
65.7
|
1.0
|
CA
|
A:THR1394
|
2.4
|
65.7
|
1.0
|
CA
|
A:GLY1395
|
3.1
|
58.9
|
1.0
|
O
|
A:THR1394
|
3.3
|
65.7
|
1.0
|
N
|
A:THR1394
|
3.5
|
65.7
|
1.0
|
O
|
A:ASN1393
|
3.5
|
82.8
|
1.0
|
CG2
|
A:THR1394
|
3.5
|
65.7
|
1.0
|
CB
|
A:THR1394
|
3.5
|
65.7
|
1.0
|
CD2
|
A:LEU860
|
3.6
|
21.0
|
1.0
|
C
|
A:ASN1393
|
3.9
|
82.8
|
1.0
|
CD1
|
A:LEU860
|
4.2
|
21.0
|
1.0
|
CG
|
A:LEU860
|
4.4
|
21.0
|
1.0
|
C
|
A:GLY1395
|
4.4
|
58.9
|
1.0
|
OG1
|
A:THR1394
|
4.5
|
65.7
|
1.0
|
OD1
|
A:ASP1419
|
4.7
|
55.4
|
1.0
|
OG
|
A:SER859
|
4.7
|
23.9
|
1.0
|
|
Reference:
C.Yang,
K.Murakami.
Consensus Map of Picdeltatfiik FORM1 To Be Published.
Page generated: Wed Nov 13 12:03:51 2024
|