Magnesium in PDB 8uot: Composite Map of Picdeltatfiik FORM1

All present enzymatic activity of Composite Map of Picdeltatfiik FORM1:
2.7.7.6; 3.6.4.12; 5.6.2.3;

The structure of Composite Map of Picdeltatfiik FORM1 also contains other interesting chemical elements:

Zinc	(Zn)	15 atoms
Iron	(Fe)	4 atoms

The binding sites of Magnesium atom in the Composite Map of Picdeltatfiik FORM1 (pdb code 8uot). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Composite Map of Picdeltatfiik FORM1, PDB code: 8uot:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Composite Map of Picdeltatfiik FORM1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Composite Map of Picdeltatfiik FORM1 within 5.0Å range: probe atom residue distance (Å) B Occ 7:Mg901 b:244.1 occ:1.00 N 7:SER655 2.2 298.9 1.0 OG 7:SER655 2.3 298.9 1.0 C 7:SER655 2.5 298.9 1.0 CA 7:SER655 2.6 298.9 1.0 CG2 7:VAL657 2.6 321.1 1.0 O 7:SER655 2.7 298.9 1.0 CB 7:SER655 2.8 298.9 1.0 N 7:GLY658 2.9 330.1 1.0 N 7:VAL657 3.0 321.1 1.0 N 7:LYS656 3.3 316.7 1.0 C 7:LEU654 3.4 300.9 1.0 O 7:ILE627 3.5 295.8 1.0 CA 7:VAL657 3.6 321.1 1.0 C 7:VAL657 3.6 321.1 1.0 CB 7:VAL657 3.6 321.1 1.0 CA 7:GLY658 3.9 330.1 1.0 CA 7:LEU654 3.9 300.9 1.0 C 7:LYS656 4.0 316.7 1.0 CA 7:TYR628 4.0 322.8 1.0 CB 7:LEU654 4.1 300.9 1.0 CA 7:LYS656 4.2 316.7 1.0 C 7:ILE627 4.2 295.8 1.0 CD2 7:LEU654 4.3 300.9 1.0 O 7:LEU654 4.4 300.9 1.0 C 7:TYR628 4.5 322.8 1.0 N 7:TYR628 4.5 322.8 1.0 CG1 7:VAL657 4.5 321.1 1.0 CG2 7:ILE627 4.5 295.8 1.0 O 7:VAL657 4.7 321.1 1.0 CG 7:LEU654 4.8 300.9 1.0 N 7:GLY629 4.9 337.9 1.0 O 7:TYR628 4.9 322.8 1.0 C 7:GLY658 4.9 330.1 1.0

Magnesium binding site 2 out of 2 in the Composite Map of Picdeltatfiik FORM1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Composite Map of Picdeltatfiik FORM1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1803 b:129.6 occ:1.00 N A:GLY1395 2.1 58.9 1.0 C A:THR1394 2.4 65.7 1.0 CA A:THR1394 2.4 65.7 1.0 CA A:GLY1395 3.1 58.9 1.0 O A:THR1394 3.3 65.7 1.0 N A:THR1394 3.4 65.7 1.0 O A:ASN1393 3.5 82.8 1.0 CG2 A:THR1394 3.5 65.7 1.0 CB A:THR1394 3.6 65.7 1.0 CD2 A:LEU860 3.6 21.0 1.0 C A:ASN1393 3.9 82.8 1.0 CD1 A:LEU860 4.2 21.0 1.0 CG A:LEU860 4.4 21.0 1.0 OG1 A:THR1394 4.4 65.7 1.0 C A:GLY1395 4.4 58.9 1.0 OD1 A:ASP1419 4.7 55.4 1.0 OG A:SER859 4.7 23.9 1.0

C.Yang, P.Basnet, S.Sharmin, H.Shen, C.D.Kaplan, K.Murakami. Transcription Start Site Scanning Requires the Fungi-Specific Hydrophobic Loop of TFB3. Nucleic Acids Res. 2024.
ISSN: ESSN 1362-4962
PubMed: 39287137
DOI: 10.1093/NAR/GKAE805