Magnesium in PDB 8uru: SPO11 Core Complex with Hairpin Dna

The binding sites of Magnesium atom in the SPO11 Core Complex with Hairpin Dna (pdb code 8uru). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the SPO11 Core Complex with Hairpin Dna, PDB code: 8uru:

Magnesium binding site 1 out of 1 in the SPO11 Core Complex with Hairpin Dna


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of SPO11 Core Complex with Hairpin Dna within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:38.5 occ:1.00 OD2 A:ASP288 2.1 50.6 1.0 OD2 A:ASP290 2.1 45.2 1.0 CG A:ASP288 3.2 50.6 1.0 CG A:ASP290 3.2 45.2 1.0 OD1 A:ASP288 3.7 50.6 1.0 OD1 A:ASP290 3.8 45.2 1.0 NZ A:LYS234 4.2 57.9 1.0 CB A:ASP290 4.3 45.2 1.0 CB A:ASP288 4.4 50.6 1.0 CB A:GLU386 4.5 64.5 1.0 CE A:LYS234 4.7 57.9 1.0 C5' D:DC48 4.8 58.8 1.0 CA A:GLU386 4.9 64.5 1.0 OP1 D:DC48 4.9 58.8 1.0

Y.Yu, J.C.Wang, K.X.Liu, Z.Zheng, D.J.Patel, S.Keeney. Cryo-Em Structure of the Yeast SPO11 Core Complex Bound to Dna To Be Published.