Magnesium in PDB 8utr: KIF1A[1-393] Adp Bound in Complex with A Microtubule

The binding sites of Magnesium atom in the KIF1A[1-393] Adp Bound in Complex with A Microtubule (pdb code 8utr). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the KIF1A[1-393] Adp Bound in Complex with A Microtubule, PDB code: 8utr:

Magnesium binding site 1 out of 1 in the KIF1A[1-393] Adp Bound in Complex with A Microtubule


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of KIF1A[1-393] Adp Bound in Complex with A Microtubule within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:84.8 occ:1.00 OD2 A:ASP98 2.0 108.0 1.0 OE2 A:GLU71 2.0 98.8 1.0 O3B A:GTP501 2.0 71.2 1.0 PB A:GTP501 2.3 99.4 1.0 O2B A:GTP501 2.3 100.2 1.0 O1B A:GTP501 2.6 95.3 1.0 CG A:ASP98 3.0 106.5 1.0 CD A:GLU71 3.0 100.0 1.0 PG A:GTP501 3.3 103.8 1.0 O1G A:GTP501 3.4 99.5 1.0 OD1 A:ASP98 3.5 109.6 1.0 CG A:GLU71 3.5 99.6 1.0 CG2 A:THR145 3.8 87.4 1.0 O3A A:GTP501 3.9 87.7 1.0 O2G A:GTP501 3.9 101.5 1.0 OD1 A:ASP69 4.0 101.9 1.0 OE1 A:GLU71 4.1 97.8 1.0 CB A:ASP98 4.3 100.0 1.0 CB A:GLU71 4.4 93.9 1.0 O3G A:GTP501 4.5 100.3 1.0 O1A A:GTP501 4.6 91.5 1.0 PA A:GTP501 4.7 80.5 1.0 CB A:THR145 4.8 87.0 1.0 CG A:ASP69 4.8 100.1 1.0 O2A A:GTP501 4.9 85.4 1.0 OD2 A:ASP69 5.0 101.5 1.0

M.P.M.H.Benoit, L.Rao, A.B.Asenjo, A.Gennerich, H.Sosa. Cryo-Em of Human KIF1A Reveals Its Mechanism of Motility and the Effect of Its Pathogenic Variant P305L To Be Published.