Magnesium in PDB 8uy7: Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2
(pdb code 8uy7). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 6 binding sites of Magnesium where determined in the
Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2, PDB code: 8uy7:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
Magnesium binding site 1 out
of 6 in 8uy7
Go back to
Magnesium Binding Sites List in 8uy7
Magnesium binding site 1 out
of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg1001
b:43.8
occ:1.00
|
OD1
|
A:ASN709
|
2.1
|
59.6
|
1.0
|
CG
|
A:ASN709
|
3.2
|
50.7
|
1.0
|
OD2
|
A:ASP780
|
3.6
|
57.2
|
1.0
|
O
|
A:HOH1143
|
3.8
|
47.2
|
1.0
|
ND2
|
A:ASN709
|
3.9
|
45.0
|
1.0
|
CB
|
A:SER776
|
4.0
|
51.0
|
1.0
|
O
|
A:HOH1126
|
4.2
|
59.5
|
1.0
|
OG
|
A:SER813
|
4.2
|
50.4
|
1.0
|
O
|
A:HOH1127
|
4.2
|
57.0
|
1.0
|
OG
|
A:SER776
|
4.2
|
58.6
|
1.0
|
O
|
A:GLY810
|
4.3
|
57.1
|
1.0
|
CG
|
A:ASP780
|
4.4
|
59.4
|
1.0
|
O
|
A:SER705
|
4.4
|
44.3
|
1.0
|
N
|
A:ASN709
|
4.4
|
46.5
|
1.0
|
CB
|
A:ASN709
|
4.4
|
38.6
|
1.0
|
OD1
|
A:ASP780
|
4.5
|
59.7
|
1.0
|
CA
|
A:ASN709
|
4.5
|
38.0
|
1.0
|
CB
|
A:GLN814
|
4.7
|
39.5
|
1.0
|
CA
|
A:GLY810
|
4.8
|
51.2
|
1.0
|
C
|
A:GLY708
|
4.9
|
40.4
|
1.0
|
|
Magnesium binding site 2 out
of 6 in 8uy7
Go back to
Magnesium Binding Sites List in 8uy7
Magnesium binding site 2 out
of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg1002
b:53.2
occ:1.00
|
OD1
|
A:ASP191
|
2.5
|
65.2
|
1.0
|
CG
|
A:ASP191
|
3.3
|
59.8
|
1.0
|
OD2
|
A:ASP191
|
3.7
|
57.8
|
1.0
|
O
|
A:THR156
|
4.0
|
64.3
|
1.0
|
OD2
|
A:ASP663
|
4.0
|
52.7
|
1.0
|
O
|
A:HOH1136
|
4.2
|
52.1
|
1.0
|
O
|
A:HOH1139
|
4.2
|
54.9
|
1.0
|
CB
|
A:ASP191
|
4.3
|
49.3
|
1.0
|
O
|
A:HOH1110
|
4.4
|
58.9
|
1.0
|
OG1
|
A:THR156
|
4.4
|
59.4
|
1.0
|
OD1
|
A:ASP663
|
4.6
|
58.2
|
1.0
|
OE1
|
A:GLU173
|
4.6
|
75.5
|
1.0
|
CG
|
A:ASP663
|
4.7
|
55.5
|
1.0
|
OE2
|
A:GLU173
|
4.7
|
76.8
|
1.0
|
O
|
A:HOH1172
|
4.8
|
36.7
|
1.0
|
C
|
A:THR156
|
4.8
|
57.7
|
1.0
|
OG1
|
A:THR158
|
4.8
|
61.4
|
1.0
|
CA
|
A:ASP191
|
4.9
|
48.6
|
1.0
|
O
|
A:HOH1157
|
5.0
|
57.1
|
1.0
|
|
Magnesium binding site 3 out
of 6 in 8uy7
Go back to
Magnesium Binding Sites List in 8uy7
Magnesium binding site 3 out
of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg1003
b:67.6
occ:1.00
|
OD1
|
A:ASP441
|
2.1
|
69.6
|
1.0
|
O
|
A:HOH1117
|
2.5
|
57.7
|
1.0
|
OD1
|
A:ASP204
|
3.0
|
66.3
|
1.0
|
CG
|
A:ASP441
|
3.0
|
62.9
|
1.0
|
OD2
|
A:ASP441
|
3.2
|
64.3
|
1.0
|
CG
|
A:ASP526
|
3.5
|
85.2
|
1.0
|
OD1
|
A:ASP526
|
3.6
|
85.8
|
1.0
|
OD2
|
A:ASP526
|
3.6
|
85.6
|
1.0
|
O
|
A:HOH1140
|
4.0
|
58.4
|
1.0
|
CB
|
A:ASP526
|
4.1
|
81.7
|
1.0
|
CG
|
A:ASP204
|
4.2
|
66.9
|
1.0
|
CB
|
A:ASP441
|
4.4
|
55.4
|
1.0
|
O
|
A:GLU442
|
4.6
|
62.2
|
1.0
|
OD2
|
A:ASP204
|
4.7
|
67.1
|
1.0
|
N
|
A:GLU442
|
4.8
|
55.2
|
1.0
|
CA
|
A:ASP441
|
4.8
|
57.8
|
1.0
|
CA
|
A:ASP526
|
4.9
|
81.8
|
1.0
|
OE1
|
A:GLU220
|
4.9
|
70.5
|
1.0
|
CZ
|
A:PHE206
|
4.9
|
48.2
|
1.0
|
|
Magnesium binding site 4 out
of 6 in 8uy7
Go back to
Magnesium Binding Sites List in 8uy7
Magnesium binding site 4 out
of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg1001
b:42.5
occ:1.00
|
OD1
|
B:ASN709
|
2.1
|
57.4
|
1.0
|
CG
|
B:ASN709
|
3.2
|
48.3
|
1.0
|
OD2
|
B:ASP780
|
3.6
|
57.1
|
1.0
|
O
|
B:HOH1142
|
3.8
|
48.0
|
1.0
|
ND2
|
B:ASN709
|
3.9
|
45.0
|
1.0
|
CB
|
B:SER776
|
4.0
|
51.8
|
1.0
|
O
|
B:HOH1128
|
4.1
|
63.1
|
1.0
|
OG
|
B:SER776
|
4.2
|
58.6
|
1.0
|
O
|
B:HOH1127
|
4.2
|
55.5
|
1.0
|
O
|
B:GLY810
|
4.3
|
56.3
|
1.0
|
OG
|
B:SER813
|
4.3
|
50.3
|
1.0
|
OE1
|
B:GLN814
|
4.3
|
49.7
|
1.0
|
N
|
B:ASN709
|
4.4
|
45.6
|
1.0
|
O
|
B:SER705
|
4.4
|
45.0
|
1.0
|
CG
|
B:ASP780
|
4.4
|
59.6
|
1.0
|
CB
|
B:ASN709
|
4.4
|
37.9
|
1.0
|
OD1
|
B:ASP780
|
4.5
|
59.5
|
1.0
|
CA
|
B:ASN709
|
4.5
|
36.6
|
1.0
|
CB
|
B:GLN814
|
4.5
|
40.2
|
1.0
|
CA
|
B:GLY810
|
4.8
|
50.9
|
1.0
|
C
|
B:GLY708
|
4.9
|
41.8
|
1.0
|
CD
|
B:GLN814
|
5.0
|
47.9
|
1.0
|
N
|
B:GLN814
|
5.0
|
53.8
|
1.0
|
|
Magnesium binding site 5 out
of 6 in 8uy7
Go back to
Magnesium Binding Sites List in 8uy7
Magnesium binding site 5 out
of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg1002
b:55.9
occ:1.00
|
OD1
|
B:ASP191
|
2.2
|
63.0
|
1.0
|
CG
|
B:ASP191
|
3.3
|
57.9
|
1.0
|
OD2
|
B:ASP191
|
3.9
|
56.8
|
1.0
|
O
|
B:THR156
|
4.0
|
65.7
|
1.0
|
OD2
|
B:ASP663
|
4.0
|
52.5
|
1.0
|
O
|
B:HOH1140
|
4.2
|
56.0
|
1.0
|
O
|
B:HOH1137
|
4.2
|
52.8
|
1.0
|
CB
|
B:ASP191
|
4.3
|
47.6
|
1.0
|
O
|
B:HOH1110
|
4.4
|
59.0
|
1.0
|
OG1
|
B:THR156
|
4.5
|
60.2
|
1.0
|
OD1
|
B:ASP663
|
4.5
|
58.7
|
1.0
|
OE1
|
B:GLU173
|
4.6
|
74.9
|
1.0
|
OE2
|
B:GLU173
|
4.7
|
75.7
|
1.0
|
CG
|
B:ASP663
|
4.7
|
56.0
|
1.0
|
O
|
B:HOH1172
|
4.8
|
36.4
|
1.0
|
C
|
B:THR156
|
4.8
|
57.8
|
1.0
|
OG1
|
B:THR158
|
4.8
|
61.3
|
1.0
|
CA
|
B:ASP191
|
4.9
|
46.7
|
1.0
|
O
|
B:HOH1150
|
5.0
|
55.8
|
1.0
|
|
Magnesium binding site 6 out
of 6 in 8uy7
Go back to
Magnesium Binding Sites List in 8uy7
Magnesium binding site 6 out
of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg1003
b:71.9
occ:1.00
|
OD1
|
B:ASP441
|
2.2
|
72.0
|
1.0
|
O
|
B:HOH1123
|
2.5
|
64.1
|
1.0
|
CG
|
B:ASP441
|
3.2
|
64.7
|
1.0
|
OD1
|
B:ASP204
|
3.3
|
66.4
|
1.0
|
OD2
|
B:ASP441
|
3.4
|
66.5
|
1.0
|
CG
|
B:ASP526
|
3.5
|
85.5
|
1.0
|
OD1
|
B:ASP526
|
3.6
|
85.8
|
1.0
|
OD2
|
B:ASP526
|
3.7
|
84.8
|
1.0
|
O
|
B:HOH1132
|
4.0
|
63.3
|
1.0
|
CB
|
B:ASP526
|
4.1
|
82.9
|
1.0
|
CG
|
B:ASP204
|
4.5
|
68.3
|
1.0
|
CB
|
B:ASP441
|
4.6
|
57.8
|
1.0
|
O
|
B:GLU442
|
4.6
|
63.7
|
1.0
|
OE1
|
B:GLU220
|
4.8
|
70.1
|
1.0
|
N
|
B:GLU442
|
4.8
|
56.8
|
1.0
|
CA
|
B:ASP526
|
4.9
|
81.9
|
1.0
|
CZ
|
B:PHE206
|
4.9
|
48.2
|
1.0
|
CA
|
B:ASP441
|
4.9
|
58.2
|
1.0
|
|
Reference:
R.Zeinert,
F.Zhou,
P.H.Cavalcanti Franco,
J.Zoeller,
H.Lessen,
A.Iyer,
J.D.Langer,
A.J.Sodt,
G.Storz,
D.Matthies.
Magnesium Transporter Mgta Revealed As A Dimeric P-Type Atpase To Be Published.
Page generated: Tue Dec 10 20:48:16 2024
|