Magnesium in PDB 8uy8: Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 in C1
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 in C1
(pdb code 8uy8). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 6 binding sites of Magnesium where determined in the
Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 in C1, PDB code: 8uy8:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
Magnesium binding site 1 out
of 6 in 8uy8
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Magnesium Binding Sites List in 8uy8
Magnesium binding site 1 out
of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 in C1
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 in C1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg1001
b:63.4
occ:1.00
|
OD1
|
A:ASN709
|
2.0
|
76.4
|
1.0
|
CG
|
A:ASN709
|
3.2
|
69.0
|
1.0
|
O
|
A:HOH1132
|
3.5
|
76.3
|
1.0
|
OD2
|
A:ASP780
|
3.7
|
79.8
|
1.0
|
ND2
|
A:ASN709
|
3.7
|
64.8
|
1.0
|
O
|
A:HOH1129
|
4.0
|
70.9
|
1.0
|
OG
|
A:SER776
|
4.0
|
78.7
|
1.0
|
OG
|
A:SER813
|
4.3
|
68.0
|
1.0
|
O
|
A:GLY810
|
4.3
|
74.4
|
1.0
|
O
|
A:SER705
|
4.3
|
62.2
|
1.0
|
CB
|
A:ASN709
|
4.4
|
61.4
|
1.0
|
O
|
A:SER776
|
4.5
|
73.5
|
1.0
|
N
|
A:ASN709
|
4.5
|
64.1
|
1.0
|
CG
|
A:ASP780
|
4.5
|
78.3
|
1.0
|
OD1
|
A:ASP780
|
4.5
|
81.7
|
1.0
|
CA
|
A:ASN709
|
4.6
|
58.6
|
1.0
|
O
|
A:HOH1126
|
4.6
|
79.1
|
1.0
|
CB
|
A:GLN814
|
4.6
|
62.3
|
1.0
|
CB
|
A:SER776
|
4.7
|
72.5
|
1.0
|
CA
|
A:GLY810
|
4.9
|
69.6
|
1.0
|
N
|
A:GLN814
|
5.0
|
78.5
|
1.0
|
CG
|
A:GLN814
|
5.0
|
66.4
|
1.0
|
|
Magnesium binding site 2 out
of 6 in 8uy8
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Magnesium Binding Sites List in 8uy8
Magnesium binding site 2 out
of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 in C1
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 in C1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg1002
b:71.0
occ:1.00
|
OD1
|
A:ASP191
|
2.6
|
84.9
|
1.0
|
CG
|
A:ASP191
|
3.3
|
79.7
|
1.0
|
O
|
A:THR156
|
3.6
|
86.4
|
1.0
|
OD2
|
A:ASP191
|
3.7
|
76.5
|
1.0
|
OD2
|
A:ASP663
|
4.1
|
74.6
|
1.0
|
OE1
|
A:GLU173
|
4.2
|
87.6
|
1.0
|
OG1
|
A:THR156
|
4.3
|
83.0
|
1.0
|
OE2
|
A:GLU173
|
4.4
|
91.2
|
1.0
|
CB
|
A:ASP191
|
4.4
|
72.5
|
1.0
|
O
|
A:HOH1103
|
4.5
|
69.1
|
1.0
|
C
|
A:THR156
|
4.5
|
77.8
|
1.0
|
OD1
|
A:ASP663
|
4.5
|
75.5
|
1.0
|
OG1
|
A:THR158
|
4.6
|
84.4
|
1.0
|
CG
|
A:ASP663
|
4.7
|
72.7
|
1.0
|
CD
|
A:GLU173
|
4.8
|
90.0
|
1.0
|
O
|
A:HOH1152
|
5.0
|
78.7
|
1.0
|
|
Magnesium binding site 3 out
of 6 in 8uy8
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Magnesium Binding Sites List in 8uy8
Magnesium binding site 3 out
of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 in C1
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 in C1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg1003
b:95.0
occ:1.00
|
OD1
|
A:ASP204
|
2.1
|
92.4
|
1.0
|
OD1
|
A:ASP441
|
2.3
|
92.2
|
1.0
|
CG
|
A:ASP204
|
3.2
|
92.6
|
1.0
|
CG
|
A:ASP441
|
3.4
|
93.0
|
1.0
|
OD1
|
A:ASP526
|
3.8
|
116.7
|
1.0
|
OD2
|
A:ASP204
|
3.8
|
90.1
|
1.0
|
O
|
A:HOH1143
|
4.0
|
80.5
|
1.0
|
OD2
|
A:ASP441
|
4.0
|
94.7
|
1.0
|
CG
|
A:ASP526
|
4.0
|
116.3
|
1.0
|
OD2
|
A:ASP526
|
4.1
|
114.9
|
1.0
|
CB
|
A:ASP204
|
4.4
|
90.4
|
1.0
|
CA
|
A:ASP204
|
4.5
|
86.6
|
1.0
|
CB
|
A:ASP441
|
4.6
|
85.0
|
1.0
|
CA
|
A:ASP441
|
4.8
|
84.6
|
1.0
|
OE1
|
A:GLU220
|
4.9
|
96.8
|
1.0
|
O
|
A:ILE440
|
5.0
|
85.1
|
1.0
|
CB
|
A:ASP526
|
5.0
|
113.5
|
1.0
|
N
|
A:GLU442
|
5.0
|
76.7
|
1.0
|
|
Magnesium binding site 4 out
of 6 in 8uy8
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Magnesium Binding Sites List in 8uy8
Magnesium binding site 4 out
of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 in C1
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 in C1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg1001
b:61.5
occ:1.00
|
OD1
|
B:ASN709
|
2.0
|
73.2
|
1.0
|
CG
|
B:ASN709
|
3.1
|
70.7
|
1.0
|
OD2
|
B:ASP780
|
3.6
|
84.2
|
1.0
|
ND2
|
B:ASN709
|
3.7
|
70.0
|
1.0
|
O
|
B:GLY810
|
4.1
|
75.0
|
1.0
|
OG
|
B:SER813
|
4.3
|
66.3
|
1.0
|
OE1
|
B:GLN814
|
4.3
|
68.8
|
1.0
|
CB
|
B:ASN709
|
4.4
|
61.2
|
1.0
|
OD1
|
B:ASP780
|
4.4
|
84.4
|
1.0
|
CG
|
B:ASP780
|
4.4
|
83.1
|
1.0
|
CA
|
B:GLY810
|
4.5
|
73.6
|
1.0
|
CB
|
B:SER776
|
4.5
|
73.9
|
1.0
|
CA
|
B:ASN709
|
4.6
|
59.1
|
1.0
|
N
|
B:ASN709
|
4.6
|
62.6
|
1.0
|
CB
|
B:GLN814
|
4.6
|
63.0
|
1.0
|
O
|
B:SER705
|
4.6
|
60.5
|
1.0
|
OG
|
B:SER776
|
4.7
|
78.0
|
1.0
|
C
|
B:GLY810
|
4.7
|
69.7
|
1.0
|
CD
|
B:GLN814
|
4.8
|
69.6
|
1.0
|
CG
|
B:GLN814
|
5.0
|
64.6
|
1.0
|
|
Magnesium binding site 5 out
of 6 in 8uy8
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Magnesium Binding Sites List in 8uy8
Magnesium binding site 5 out
of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 in C1
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 in C1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg1002
b:69.3
occ:1.00
|
OD1
|
B:ASP191
|
2.2
|
80.5
|
1.0
|
CG
|
B:ASP191
|
3.3
|
75.5
|
1.0
|
O
|
B:THR156
|
3.9
|
85.2
|
1.0
|
OD2
|
B:ASP191
|
3.9
|
72.7
|
1.0
|
O
|
B:HOH1119
|
4.1
|
90.1
|
1.0
|
OD2
|
B:ASP663
|
4.1
|
76.7
|
1.0
|
O
|
B:HOH1104
|
4.2
|
72.7
|
1.0
|
CB
|
B:ASP191
|
4.5
|
66.9
|
1.0
|
OE1
|
B:GLU173
|
4.5
|
96.0
|
1.0
|
OE2
|
B:GLU173
|
4.6
|
96.2
|
1.0
|
OD1
|
B:ASP663
|
4.6
|
77.5
|
1.0
|
OG1
|
B:THR156
|
4.6
|
79.4
|
1.0
|
O
|
B:HOH1146
|
4.7
|
63.7
|
1.0
|
OG1
|
B:THR158
|
4.8
|
82.0
|
1.0
|
CG
|
B:ASP663
|
4.8
|
73.2
|
1.0
|
C
|
B:THR156
|
4.9
|
77.9
|
1.0
|
CD
|
B:GLU173
|
5.0
|
97.4
|
1.0
|
|
Magnesium binding site 6 out
of 6 in 8uy8
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Magnesium Binding Sites List in 8uy8
Magnesium binding site 6 out
of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 in C1
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 in C1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg1003
b:83.2
occ:1.00
|
OD1
|
B:ASP441
|
2.3
|
86.5
|
1.0
|
OD1
|
B:ASP204
|
3.0
|
87.0
|
1.0
|
CG
|
B:ASP441
|
3.3
|
84.0
|
1.0
|
OD2
|
B:ASP441
|
3.7
|
83.8
|
1.0
|
OD1
|
B:ASP526
|
3.7
|
106.2
|
1.0
|
CG
|
B:ASP526
|
3.9
|
105.8
|
1.0
|
OD2
|
B:ASP526
|
4.1
|
106.1
|
1.0
|
CG
|
B:ASP204
|
4.2
|
90.9
|
1.0
|
OE1
|
B:GLU220
|
4.2
|
89.8
|
1.0
|
CB
|
B:ASP441
|
4.6
|
79.2
|
1.0
|
CB
|
B:ASP526
|
4.7
|
103.5
|
1.0
|
O
|
B:GLU442
|
4.7
|
85.6
|
1.0
|
N
|
B:GLU442
|
4.7
|
69.5
|
1.0
|
CD
|
B:GLU220
|
4.8
|
86.5
|
1.0
|
CZ
|
B:PHE206
|
4.8
|
68.3
|
1.0
|
CA
|
B:ASP441
|
4.8
|
77.9
|
1.0
|
CE1
|
B:PHE206
|
4.8
|
71.6
|
1.0
|
CA
|
B:ASP204
|
4.9
|
85.7
|
1.0
|
OD2
|
B:ASP204
|
5.0
|
94.0
|
1.0
|
CB
|
B:ASP204
|
5.0
|
88.9
|
1.0
|
|
Reference:
R.Zeinert,
F.Zhou,
P.H.Cavalcanti Franco,
J.Zoeller,
H.Lessen,
A.Iyer,
J.D.Langer,
A.J.Sodt,
G.Storz,
D.Matthies.
Magnesium Transporter Mgta Revealed As A Dimeric P-Type Atpase To Be Published.
Page generated: Tue Dec 10 20:48:29 2024
|