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Magnesium in PDB 8uyb: Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Atpys

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Atpys (pdb code 8uyb). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 6 binding sites of Magnesium where determined in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Atpys, PDB code: 8uyb:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6;

Magnesium binding site 1 out of 6 in 8uyb

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Magnesium binding site 1 out of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Atpys


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Atpys within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1001

b:132.4
occ:1.00
OG A:SER813 2.3 126.1 1.0
CA A:GLY810 2.7 126.5 1.0
O A:GLY810 2.8 126.5 1.0
ND2 A:ASN709 3.0 115.1 1.0
C A:GLY810 3.1 126.5 1.0
CB A:SER813 3.6 126.1 1.0
OD1 A:ASP780 3.8 136.4 1.0
N A:GLY810 3.9 126.5 1.0
NE2 A:GLN733 4.0 122.3 1.0
CG A:ASN709 4.1 115.1 1.0
OD2 A:ASP780 4.1 136.4 1.0
O A:VAL809 4.2 128.9 1.0
OD1 A:ASN709 4.3 115.1 1.0
CG A:ASP780 4.3 136.4 1.0
N A:LEU811 4.3 124.3 1.0
NE1 A:TRP806 4.4 128.2 1.0
C A:VAL809 4.5 128.9 1.0
N A:GLN814 4.5 125.3 1.0
CG A:GLN814 4.6 125.3 1.0
CA A:SER813 4.7 126.1 1.0
N A:SER813 4.9 126.1 1.0

Magnesium binding site 2 out of 6 in 8uyb

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Magnesium binding site 2 out of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Atpys


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Atpys within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1002

b:110.4
occ:1.00
OD1 A:ASP191 2.1 102.3 1.0
OD2 A:ASP663 2.3 97.5 1.0
CG A:ASP191 2.7 102.3 1.0
O A:THR156 2.8 101.3 1.0
CB A:ASP191 3.3 102.3 1.0
CG A:ASP663 3.4 97.5 1.0
OD2 A:ASP191 3.4 102.3 1.0
OD1 A:ASP663 3.8 97.5 1.0
CA A:ASP191 3.9 102.3 1.0
C A:THR156 3.9 101.3 1.0
OG1 A:THR156 4.0 101.3 1.0
N A:THR156 4.5 101.3 1.0
CB A:ASP663 4.6 97.5 1.0
CA A:THR156 4.7 101.3 1.0
C A:ASP191 4.8 102.3 1.0
N A:ALA157 4.9 109.0 1.0
N A:MET192 4.9 97.6 1.0
N A:ASP191 5.0 102.3 1.0
CB A:THR156 5.0 101.3 1.0

Magnesium binding site 3 out of 6 in 8uyb

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Magnesium binding site 3 out of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Atpys


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Atpys within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1003

b:120.8
occ:1.00
OD1 A:ASP441 2.1 120.8 1.0
OD1 A:ASP204 2.3 116.0 1.0
CG A:ASP441 3.1 120.8 1.0
CG A:ASP204 3.4 116.0 1.0
OD2 A:ASP441 3.6 120.8 1.0
OD2 A:ASP204 4.2 116.0 1.0
CB A:ASP204 4.4 116.0 1.0
CB A:ASP441 4.4 120.8 1.0
CA A:ASP204 4.5 116.0 1.0
OD2 A:ASP526 4.5 134.9 1.0
N A:GLU442 4.5 113.5 1.0
CA A:ASP441 4.6 120.8 1.0
CE1 A:PHE206 4.7 105.6 1.0
O A:GLU442 4.7 113.5 1.0
OE2 A:GLU220 4.9 113.8 1.0
CZ A:PHE206 5.0 105.6 1.0

Magnesium binding site 4 out of 6 in 8uyb

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Magnesium binding site 4 out of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Atpys


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Atpys within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg1001

b:131.6
occ:1.00
OG B:SER813 2.5 125.8 1.0
ND2 B:ASN709 2.7 115.4 1.0
CA B:GLY810 2.7 127.7 1.0
O B:GLY810 3.0 127.7 1.0
C B:GLY810 3.2 127.7 1.0
CG B:ASN709 3.7 115.4 1.0
CB B:SER813 3.8 125.8 1.0
OD1 B:ASP780 3.9 136.8 1.0
NE2 B:GLN733 3.9 121.3 1.0
OD1 B:ASN709 3.9 115.4 1.0
N B:GLY810 3.9 127.7 1.0
OD2 B:ASP780 4.0 136.8 1.0
CG B:ASP780 4.3 136.8 1.0
CG B:GLN814 4.4 123.6 1.0
N B:LEU811 4.5 124.2 1.0
O B:VAL809 4.5 129.2 1.0
NE1 B:TRP806 4.5 128.4 1.0
N B:GLN814 4.6 123.6 1.0
C B:VAL809 4.6 129.2 1.0
CA B:SER813 4.9 125.8 1.0

Magnesium binding site 5 out of 6 in 8uyb

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Magnesium binding site 5 out of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Atpys


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Atpys within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg1002

b:112.1
occ:1.00
OD1 B:ASP191 2.1 102.7 1.0
OD2 B:ASP663 2.3 100.3 1.0
CG B:ASP191 2.7 102.7 1.0
O B:THR156 2.7 103.3 1.0
CG B:ASP663 3.4 100.3 1.0
CB B:ASP191 3.4 102.7 1.0
OD2 B:ASP191 3.5 102.7 1.0
OD1 B:ASP663 3.8 100.3 1.0
C B:THR156 3.9 103.3 1.0
CA B:ASP191 3.9 102.7 1.0
OG1 B:THR156 4.0 103.3 1.0
N B:THR156 4.4 103.3 1.0
CB B:ASP663 4.6 100.3 1.0
CA B:THR156 4.6 103.3 1.0
N B:ALA157 4.9 110.6 1.0
C B:ASP191 4.9 102.7 1.0
N B:MET192 5.0 98.7 1.0
CB B:THR156 5.0 103.3 1.0
CA B:ALA157 5.0 110.6 1.0

Magnesium binding site 6 out of 6 in 8uyb

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Magnesium binding site 6 out of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Atpys


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Atpys within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg1003

b:120.2
occ:1.00
OD1 B:ASP441 2.1 120.9 1.0
OD1 B:ASP204 2.3 114.9 1.0
CG B:ASP441 3.1 120.9 1.0
CG B:ASP204 3.4 114.9 1.0
OD2 B:ASP441 3.6 120.9 1.0
OD2 B:ASP204 4.2 114.9 1.0
CB B:ASP204 4.4 114.9 1.0
CB B:ASP441 4.4 120.9 1.0
OD2 B:ASP526 4.5 133.3 1.0
CA B:ASP204 4.5 114.9 1.0
N B:GLU442 4.5 113.3 1.0
CA B:ASP441 4.6 120.9 1.0
O B:GLU442 4.7 113.3 1.0
CE1 B:PHE206 4.7 104.3 1.0
OE2 B:GLU220 4.9 112.2 1.0
CZ B:PHE206 5.0 104.3 1.0

Reference:

R.Zeinert, F.Zhou, P.H.Cavalcanti Franco, J.Zoeller, H.Lessen, A.Iyer, J.D.Langer, A.J.Sodt, G.Storz, D.Matthies. Magnesium Transporter Mgta Revealed As A Dimeric P-Type Atpase To Be Published.
Page generated: Tue Dec 10 20:48:16 2024

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