Magnesium in PDB 8uyc: Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Adp
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Adp
(pdb code 8uyc). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 6 binding sites of Magnesium where determined in the
Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Adp, PDB code: 8uyc:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
Magnesium binding site 1 out
of 6 in 8uyc
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Magnesium Binding Sites List in 8uyc
Magnesium binding site 1 out
of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Adp
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Adp within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg1001
b:51.7
occ:1.00
|
OD1
|
A:ASN709
|
2.0
|
63.4
|
1.0
|
CG
|
A:ASN709
|
3.1
|
63.4
|
1.0
|
ND2
|
A:ASN709
|
3.6
|
63.4
|
1.0
|
OD2
|
A:ASP780
|
3.6
|
82.7
|
1.0
|
O
|
A:GLY810
|
4.1
|
70.0
|
1.0
|
OG
|
A:SER813
|
4.2
|
65.9
|
1.0
|
OD1
|
A:ASP780
|
4.3
|
82.7
|
1.0
|
CG
|
A:ASP780
|
4.4
|
82.7
|
1.0
|
CB
|
A:ASN709
|
4.4
|
63.4
|
1.0
|
O
|
A:SER776
|
4.5
|
75.9
|
1.0
|
CA
|
A:GLY810
|
4.6
|
70.0
|
1.0
|
NE2
|
A:GLN733
|
4.6
|
67.4
|
1.0
|
CA
|
A:ASN709
|
4.6
|
63.4
|
1.0
|
O
|
A:SER705
|
4.6
|
56.6
|
1.0
|
CB
|
A:GLN814
|
4.7
|
65.8
|
1.0
|
N
|
A:ASN709
|
4.7
|
63.4
|
1.0
|
CB
|
A:SER776
|
4.7
|
75.9
|
1.0
|
C
|
A:GLY810
|
4.8
|
70.0
|
1.0
|
N
|
A:GLN814
|
4.9
|
65.8
|
1.0
|
|
Magnesium binding site 2 out
of 6 in 8uyc
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Magnesium Binding Sites List in 8uyc
Magnesium binding site 2 out
of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Adp
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Adp within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg1002
b:46.4
occ:1.00
|
OD1
|
A:ASP191
|
2.2
|
59.8
|
1.0
|
CG
|
A:ASP191
|
2.5
|
59.8
|
1.0
|
OD2
|
A:ASP191
|
2.6
|
59.8
|
1.0
|
CB
|
A:ASP191
|
3.7
|
59.8
|
1.0
|
O
|
A:THR156
|
4.3
|
68.0
|
1.0
|
CA
|
A:ASP191
|
4.6
|
59.8
|
1.0
|
OD2
|
A:ASP663
|
4.7
|
50.2
|
1.0
|
OG1
|
A:THR158
|
4.9
|
79.6
|
1.0
|
OD1
|
A:ASP663
|
5.0
|
50.2
|
1.0
|
|
Magnesium binding site 3 out
of 6 in 8uyc
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Magnesium Binding Sites List in 8uyc
Magnesium binding site 3 out
of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Adp
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Adp within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg1003
b:59.0
occ:1.00
|
OD1
|
A:ASP441
|
2.2
|
69.2
|
1.0
|
CG
|
A:ASP526
|
2.8
|
81.9
|
1.0
|
OD2
|
A:ASP526
|
2.8
|
81.9
|
1.0
|
OD1
|
A:ASP526
|
2.9
|
81.9
|
1.0
|
OD1
|
A:ASP204
|
3.1
|
71.9
|
1.0
|
CG
|
A:ASP441
|
3.1
|
69.2
|
1.0
|
OD2
|
A:ASP441
|
3.4
|
69.2
|
1.0
|
CB
|
A:ASP526
|
3.7
|
81.9
|
1.0
|
CG
|
A:ASP204
|
4.2
|
71.9
|
1.0
|
CB
|
A:ASP441
|
4.4
|
69.2
|
1.0
|
CA
|
A:ASP526
|
4.6
|
81.9
|
1.0
|
OD2
|
A:ASP204
|
4.7
|
71.9
|
1.0
|
CA
|
A:ASP441
|
4.9
|
69.2
|
1.0
|
|
Magnesium binding site 4 out
of 6 in 8uyc
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Magnesium Binding Sites List in 8uyc
Magnesium binding site 4 out
of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Adp
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Adp within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg1001
b:53.1
occ:1.00
|
OD1
|
B:ASN709
|
2.0
|
63.7
|
1.0
|
CG
|
B:ASN709
|
3.1
|
63.7
|
1.0
|
ND2
|
B:ASN709
|
3.6
|
63.7
|
1.0
|
OD2
|
B:ASP780
|
3.6
|
82.8
|
1.0
|
O
|
B:GLY810
|
4.1
|
70.8
|
1.0
|
OG
|
B:SER813
|
4.2
|
66.3
|
1.0
|
OD1
|
B:ASP780
|
4.3
|
82.8
|
1.0
|
CG
|
B:ASP780
|
4.4
|
82.8
|
1.0
|
CB
|
B:ASN709
|
4.4
|
63.7
|
1.0
|
CB
|
B:SER776
|
4.6
|
75.9
|
1.0
|
CA
|
B:GLY810
|
4.6
|
70.8
|
1.0
|
NE2
|
B:GLN733
|
4.6
|
68.0
|
1.0
|
CA
|
B:ASN709
|
4.6
|
63.7
|
1.0
|
O
|
B:SER705
|
4.6
|
56.8
|
1.0
|
CB
|
B:GLN814
|
4.7
|
65.9
|
1.0
|
N
|
B:ASN709
|
4.7
|
63.7
|
1.0
|
C
|
B:GLY810
|
4.8
|
70.8
|
1.0
|
OG
|
B:SER776
|
4.9
|
75.9
|
1.0
|
N
|
B:GLN814
|
4.9
|
65.9
|
1.0
|
|
Magnesium binding site 5 out
of 6 in 8uyc
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Magnesium Binding Sites List in 8uyc
Magnesium binding site 5 out
of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Adp
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Adp within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg1002
b:46.8
occ:1.00
|
OD1
|
B:ASP191
|
2.2
|
60.2
|
1.0
|
CG
|
B:ASP191
|
2.5
|
60.2
|
1.0
|
OD2
|
B:ASP191
|
2.6
|
60.2
|
1.0
|
CB
|
B:ASP191
|
3.7
|
60.2
|
1.0
|
O
|
B:THR156
|
4.3
|
68.0
|
1.0
|
CA
|
B:ASP191
|
4.6
|
60.2
|
1.0
|
OD2
|
B:ASP663
|
4.7
|
50.5
|
1.0
|
OG1
|
B:THR158
|
4.9
|
79.0
|
1.0
|
OD1
|
B:ASP663
|
5.0
|
50.5
|
1.0
|
|
Magnesium binding site 6 out
of 6 in 8uyc
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Magnesium Binding Sites List in 8uyc
Magnesium binding site 6 out
of 6 in the Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Adp
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Magnesium Transporter Mgta Dimer From E. Coli in 5 Mm MGCL2 and 5 Mm Adp within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg1003
b:58.8
occ:1.00
|
OD1
|
B:ASP441
|
2.2
|
69.3
|
1.0
|
OD2
|
B:ASP526
|
2.8
|
81.4
|
1.0
|
CG
|
B:ASP526
|
2.8
|
81.4
|
1.0
|
OD1
|
B:ASP526
|
2.9
|
81.4
|
1.0
|
OD1
|
B:ASP204
|
3.1
|
72.0
|
1.0
|
CG
|
B:ASP441
|
3.1
|
69.3
|
1.0
|
OD2
|
B:ASP441
|
3.4
|
69.3
|
1.0
|
CB
|
B:ASP526
|
3.7
|
81.4
|
1.0
|
CG
|
B:ASP204
|
4.2
|
72.0
|
1.0
|
CB
|
B:ASP441
|
4.4
|
69.3
|
1.0
|
CA
|
B:ASP526
|
4.6
|
81.4
|
1.0
|
OD2
|
B:ASP204
|
4.7
|
72.0
|
1.0
|
CA
|
B:ASP441
|
4.9
|
69.3
|
1.0
|
|
Reference:
R.Zeinert,
F.Zhou,
P.H.Cavalcanti Franco,
J.Zoeller,
H.Lessen,
A.Iyer,
J.D.Langer,
A.J.Sodt,
G.Storz,
D.Matthies.
Magnesium Transporter Mgta Revealed As A Dimeric P-Type Atpase To Be Published.
Page generated: Tue Dec 10 20:48:16 2024
|