Magnesium in PDB 8v2o: Cryo-Em Structure of Wildtype Smooth Muscle Gamma Actin (ACTG2)

The binding sites of Magnesium atom in the Cryo-Em Structure of Wildtype Smooth Muscle Gamma Actin (ACTG2) (pdb code 8v2o). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the Cryo-Em Structure of Wildtype Smooth Muscle Gamma Actin (ACTG2), PDB code: 8v2o:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in the Cryo-Em Structure of Wildtype Smooth Muscle Gamma Actin (ACTG2)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Wildtype Smooth Muscle Gamma Actin (ACTG2) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:91.5 occ:1.00 O1B A:ADP401 2.4 126.8 1.0 NE2 A:GLN137 3.1 118.5 1.0 O1A A:ADP401 3.3 121.4 1.0 PB A:ADP401 3.6 125.5 1.0 O3B A:ADP401 3.8 118.5 1.0 OD2 A:ASP11 3.9 135.8 1.0 OD2 A:ASP154 4.1 121.0 1.0 CD A:GLN137 4.1 117.5 1.0 OE1 A:GLN137 4.4 120.7 1.0 O3A A:ADP401 4.4 124.5 1.0 PA A:ADP401 4.4 129.4 1.0 OD1 A:ASP11 4.4 138.4 1.0 CA A:GLY13 4.5 114.9 1.0 CG A:ASP11 4.6 135.0 1.0 CA A:GLY156 4.7 104.5 1.0 O2B A:ADP401 4.8 128.7 1.0 CG2 A:VAL339 4.9 100.4 1.0 OD1 A:ASP154 4.9 116.9 1.0 CG A:ASP154 4.9 117.2 1.0 NZ A:LYS18 5.0 116.0 1.0

Magnesium binding site 2 out of 5 in the Cryo-Em Structure of Wildtype Smooth Muscle Gamma Actin (ACTG2)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryo-Em Structure of Wildtype Smooth Muscle Gamma Actin (ACTG2) within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg402 b:83.0 occ:1.00 O1B B:ADP401 2.4 107.0 1.0 O1A B:ADP401 3.4 99.0 1.0 PB B:ADP401 3.6 112.2 1.0 OE1 B:GLN137 3.6 105.6 1.0 O3B B:ADP401 3.8 97.2 1.0 OD2 B:ASP11 3.9 112.7 1.0 OD2 B:ASP154 4.1 109.8 1.0 CD B:GLN137 4.2 98.0 1.0 NE2 B:GLN137 4.3 95.8 1.0 OD1 B:ASP11 4.4 118.5 1.0 CA B:GLY13 4.4 96.3 1.0 O3A B:ADP401 4.4 108.8 1.0 PA B:ADP401 4.5 104.6 1.0 CG B:ASP11 4.5 111.5 1.0 O2B B:ADP401 4.8 114.5 1.0 CA B:GLY156 4.8 86.5 1.0 CG2 B:VAL339 4.9 77.5 1.0 NZ B:LYS18 5.0 88.8 1.0

Magnesium binding site 3 out of 5 in the Cryo-Em Structure of Wildtype Smooth Muscle Gamma Actin (ACTG2)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Cryo-Em Structure of Wildtype Smooth Muscle Gamma Actin (ACTG2) within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg402 b:79.1 occ:1.00 O1B C:ADP401 2.7 98.1 1.0 OE1 C:GLN137 3.5 102.5 1.0 O1A C:ADP401 3.5 91.7 1.0 OD2 C:ASP154 3.8 106.5 1.0 PB C:ADP401 3.9 106.4 1.0 OD2 C:ASP11 4.0 105.9 1.0 CD C:GLN137 4.0 96.6 1.0 O3B C:ADP401 4.1 87.3 1.0 NE2 C:GLN137 4.2 97.0 1.0 OD1 C:ASP11 4.4 110.6 1.0 CG C:ASP11 4.6 107.7 1.0 CA C:GLY13 4.7 88.0 1.0 PA C:ADP401 4.7 93.8 1.0 O3A C:ADP401 4.7 101.3 1.0 CG2 C:VAL339 4.7 72.5 1.0 CG C:ASP154 4.7 103.4 1.0 OD1 C:ASP154 4.8 104.2 1.0 CA C:GLY156 4.8 80.1 1.0

Magnesium binding site 4 out of 5 in the Cryo-Em Structure of Wildtype Smooth Muscle Gamma Actin (ACTG2)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Cryo-Em Structure of Wildtype Smooth Muscle Gamma Actin (ACTG2) within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg402 b:75.4 occ:1.00 O1B D:ADP401 2.6 100.2 1.0 O1A D:ADP401 3.5 93.1 1.0 OE1 D:GLN137 3.6 101.9 1.0 PB D:ADP401 3.8 97.0 1.0 OD2 D:ASP11 3.9 106.3 1.0 OD2 D:ASP154 4.0 104.2 1.0 O3B D:ADP401 4.0 83.3 1.0 CD D:GLN137 4.2 95.3 1.0 OD1 D:ASP11 4.4 112.4 1.0 NE2 D:GLN137 4.4 96.5 1.0 CG D:ASP11 4.5 107.0 1.0 CA D:GLY13 4.5 87.6 1.0 O3A D:ADP401 4.6 101.3 1.0 PA D:ADP401 4.6 95.4 1.0 CG2 D:VAL339 4.8 72.2 1.0 CA D:GLY156 4.8 75.7 1.0 CG D:ASP154 4.9 101.7 1.0 OD1 D:ASP154 4.9 102.5 1.0 O2B D:ADP401 5.0 100.9 1.0 NZ D:LYS18 5.0 73.9 1.0

Magnesium binding site 5 out of 5 in the Cryo-Em Structure of Wildtype Smooth Muscle Gamma Actin (ACTG2)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Cryo-Em Structure of Wildtype Smooth Muscle Gamma Actin (ACTG2) within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg402 b:84.8 occ:1.00 O1B E:ADP401 2.3 102.2 1.0 O1A E:ADP401 3.3 96.9 1.0 PB E:ADP401 3.5 102.1 1.0 O3B E:ADP401 3.7 88.5 1.0 OE1 E:GLN137 3.7 104.2 1.0 OD2 E:ASP11 4.1 112.5 1.0 OD2 E:ASP154 4.2 109.8 1.0 O3A E:ADP401 4.3 108.6 1.0 CD E:GLN137 4.3 99.8 1.0 CA E:GLY13 4.4 91.1 1.0 PA E:ADP401 4.4 101.1 1.0 NE2 E:GLN137 4.4 101.0 1.0 OD1 E:ASP11 4.5 115.9 1.0 O2B E:ADP401 4.7 105.9 1.0 CA E:GLY156 4.7 77.8 1.0 CG E:ASP11 4.7 112.0 1.0 NZ E:LYS18 4.9 81.9 1.0

R.H.Ceron, F.A.Baez-Cruz, N.J.Palmer, P.J.Carman, M.Boczkowska, R.O.Heuckeroth, E.M.Ostap, R.Dominguez. Molecular Mechanisms of ACTG2 Mutations Linked to Visceral Myopathy To Be Published.