Magnesium in PDB 8v2z: Cryo-Em Structure of Smooth Muscle Gamma Actin (ACTG2) Mutant R257C

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryo-Em Structure of Smooth Muscle Gamma Actin (ACTG2) Mutant R257C (pdb code 8v2z). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the Cryo-Em Structure of Smooth Muscle Gamma Actin (ACTG2) Mutant R257C, PDB code: 8v2z:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in 8v2z

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Magnesium binding site 1 out of 5 in the Cryo-Em Structure of Smooth Muscle Gamma Actin (ACTG2) Mutant R257C


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Smooth Muscle Gamma Actin (ACTG2) Mutant R257C within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg402

b:88.8
occ:1.00
O3B A:ADP401 2.2 123.3 1.0
PB A:ADP401 3.5 123.1 1.0
O2A A:ADP401 3.6 116.8 1.0
O2B A:ADP401 3.8 121.0 1.0
OE1 A:GLN137 3.9 129.3 1.0
OD2 A:ASP11 4.1 132.5 1.0
CA A:GLY13 4.2 119.7 1.0
OD2 A:ASP154 4.2 128.0 1.0
NE2 A:GLN137 4.3 124.2 1.0
CD A:GLN137 4.4 124.7 1.0
O3A A:ADP401 4.5 122.6 1.0
OD1 A:ASP11 4.5 133.2 1.0
NZ A:LYS18 4.6 111.1 1.0
O1B A:ADP401 4.6 123.7 1.0
PA A:ADP401 4.6 120.7 1.0
CG A:ASP11 4.7 131.5 1.0
CA A:GLY156 4.8 111.0 1.0

Magnesium binding site 2 out of 5 in 8v2z

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Magnesium binding site 2 out of 5 in the Cryo-Em Structure of Smooth Muscle Gamma Actin (ACTG2) Mutant R257C


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryo-Em Structure of Smooth Muscle Gamma Actin (ACTG2) Mutant R257C within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg402

b:76.8
occ:1.00
O3B B:ADP401 2.2 114.6 1.0
O2A B:ADP401 3.4 108.6 1.0
PB B:ADP401 3.5 117.3 1.0
O2B B:ADP401 3.8 108.5 1.0
OD2 B:ASP11 4.0 126.1 1.0
OE1 B:GLN137 4.0 130.8 1.0
CA B:GLY13 4.2 106.8 1.0
NZ B:LYS18 4.2 95.7 1.0
NE2 B:GLN137 4.3 120.9 1.0
O3A B:ADP401 4.3 110.8 1.0
CD B:GLN137 4.4 124.5 1.0
OD2 B:ASP154 4.4 118.2 1.0
OD1 B:ASP11 4.4 127.4 1.0
PA B:ADP401 4.5 108.5 1.0
O1B B:ADP401 4.6 118.2 1.0
CG B:ASP11 4.6 125.6 1.0
CA B:GLY156 4.9 108.1 1.0
N B:GLY13 4.9 106.6 1.0

Magnesium binding site 3 out of 5 in 8v2z

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Magnesium binding site 3 out of 5 in the Cryo-Em Structure of Smooth Muscle Gamma Actin (ACTG2) Mutant R257C


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Cryo-Em Structure of Smooth Muscle Gamma Actin (ACTG2) Mutant R257C within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg402

b:85.1
occ:1.00
O3B C:ADP401 2.3 114.0 1.0
PB C:ADP401 3.6 112.9 1.0
O2A C:ADP401 3.7 110.9 1.0
O2B C:ADP401 3.9 104.2 1.0
OE1 C:GLN137 3.9 130.8 1.0
OD2 C:ASP11 4.0 122.8 1.0
OD2 C:ASP154 4.2 121.6 1.0
NE2 C:GLN137 4.2 128.0 1.0
NZ C:LYS18 4.2 97.4 1.0
CD C:GLN137 4.3 125.8 1.0
OD1 C:ASP11 4.4 125.8 1.0
CA C:GLY13 4.4 110.3 1.0
O3A C:ADP401 4.5 111.4 1.0
CG C:ASP11 4.6 123.4 1.0
O1B C:ADP401 4.6 116.6 1.0
PA C:ADP401 4.6 111.4 1.0
CG2 C:VAL339 4.9 93.2 1.0
CA C:GLY156 4.9 103.5 1.0

Magnesium binding site 4 out of 5 in 8v2z

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Magnesium binding site 4 out of 5 in the Cryo-Em Structure of Smooth Muscle Gamma Actin (ACTG2) Mutant R257C


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Cryo-Em Structure of Smooth Muscle Gamma Actin (ACTG2) Mutant R257C within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg402

b:85.8
occ:1.00
O3B D:ADP401 2.5 109.6 1.0
O2A D:ADP401 3.5 113.4 1.0
PB D:ADP401 3.7 118.3 1.0
OE1 D:GLN137 3.9 127.3 1.0
O2B D:ADP401 3.9 116.1 1.0
OD2 D:ASP11 4.1 123.9 1.0
OD2 D:ASP154 4.1 121.7 1.0
NE2 D:GLN137 4.3 122.7 1.0
CD D:GLN137 4.3 123.2 1.0
CA D:GLY13 4.5 114.7 1.0
OD1 D:ASP11 4.5 127.1 1.0
O3A D:ADP401 4.6 120.4 1.0
PA D:ADP401 4.6 112.7 1.0
CG D:ASP11 4.7 123.8 1.0
CA D:GLY156 4.8 104.0 1.0
O1B D:ADP401 4.9 121.8 1.0
CG2 D:VAL339 4.9 96.9 1.0
CG D:ASP154 5.0 122.7 1.0
OD1 D:ASP154 5.0 125.1 1.0
CE D:LYS18 5.0 103.7 1.0
NZ D:LYS18 5.0 103.0 1.0

Magnesium binding site 5 out of 5 in 8v2z

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Magnesium binding site 5 out of 5 in the Cryo-Em Structure of Smooth Muscle Gamma Actin (ACTG2) Mutant R257C


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Cryo-Em Structure of Smooth Muscle Gamma Actin (ACTG2) Mutant R257C within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg402

b:91.8
occ:1.00
O3B E:ADP401 2.4 119.0 1.0
O2A E:ADP401 3.5 116.0 1.0
PB E:ADP401 3.6 122.8 1.0
O2B E:ADP401 3.8 122.0 1.0
OE1 E:GLN137 4.0 134.8 1.0
OD2 E:ASP11 4.0 137.2 1.0
NE2 E:GLN137 4.2 132.2 1.0
CA E:GLY13 4.2 126.2 1.0
OD2 E:ASP154 4.3 130.6 1.0
CD E:GLN137 4.3 132.3 1.0
OD1 E:ASP11 4.5 138.8 1.0
O3A E:ADP401 4.5 125.4 1.0
PA E:ADP401 4.6 118.3 1.0
CG E:ASP11 4.6 137.5 1.0
NZ E:LYS18 4.7 117.7 1.0
O1B E:ADP401 4.7 125.3 1.0
CE E:LYS18 4.8 114.5 1.0
CA E:GLY156 4.9 109.0 1.0
N E:GLY13 5.0 122.4 1.0

Reference:

R.H.Ceron, F.A.Baez-Cruz, N.J.Palmer, P.J.Carman, M.Boczkowska, R.O.Heuckeroth, E.M.Ostap, R.Dominguez. Smooth Muscle Gamma Actin (ACTG2) Filament Mutant R257C To Be Published.
Page generated: Fri Oct 4 21:56:21 2024

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