Magnesium in PDB 8v30: Smooth Muscle Gamma Actin (ACTG2) Filament Mutant R40C
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Smooth Muscle Gamma Actin (ACTG2) Filament Mutant R40C
(pdb code 8v30). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the
Smooth Muscle Gamma Actin (ACTG2) Filament Mutant R40C, PDB code: 8v30:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
Magnesium binding site 1 out
of 5 in 8v30
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Magnesium Binding Sites List in 8v30
Magnesium binding site 1 out
of 5 in the Smooth Muscle Gamma Actin (ACTG2) Filament Mutant R40C
![](/pictures/MG/pdb/v3/8v30-MG-sphere_01.jpg) Mono view
![](/pictures/MG/pdb/v3/8v30-MG-sphere_01_stereo.jpg) Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Smooth Muscle Gamma Actin (ACTG2) Filament Mutant R40C within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg402
b:99.2
occ:1.00
|
O1B
|
A:ADP401
|
2.4
|
142.7
|
1.0
|
O3B
|
A:ADP401
|
3.3
|
136.8
|
1.0
|
PB
|
A:ADP401
|
3.4
|
144.4
|
1.0
|
O1A
|
A:ADP401
|
3.5
|
138.1
|
1.0
|
OE1
|
A:GLN137
|
3.9
|
135.3
|
1.0
|
OD2
|
A:ASP11
|
4.1
|
142.5
|
1.0
|
O3A
|
A:ADP401
|
4.3
|
136.6
|
1.0
|
OD2
|
A:ASP154
|
4.4
|
136.2
|
1.0
|
PA
|
A:ADP401
|
4.4
|
136.9
|
1.0
|
CD
|
A:GLN137
|
4.4
|
129.7
|
1.0
|
CA
|
A:GLY13
|
4.5
|
136.0
|
1.0
|
NE2
|
A:GLN137
|
4.5
|
126.7
|
1.0
|
CA
|
A:GLY156
|
4.6
|
125.9
|
1.0
|
O2B
|
A:ADP401
|
4.6
|
140.0
|
1.0
|
OD1
|
A:ASP11
|
4.7
|
147.9
|
1.0
|
CG
|
A:ASP11
|
4.8
|
144.0
|
1.0
|
NZ
|
A:LYS18
|
4.9
|
126.1
|
1.0
|
|
Magnesium binding site 2 out
of 5 in 8v30
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Magnesium Binding Sites List in 8v30
Magnesium binding site 2 out
of 5 in the Smooth Muscle Gamma Actin (ACTG2) Filament Mutant R40C
![](/pictures/MG/pdb/v3/8v30-MG-sphere_02.jpg) Mono view
![](/pictures/MG/pdb/v3/8v30-MG-sphere_02_stereo.jpg) Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Smooth Muscle Gamma Actin (ACTG2) Filament Mutant R40C within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg402
b:91.2
occ:1.00
|
O1B
|
B:ADP401
|
2.6
|
127.2
|
1.0
|
O3B
|
B:ADP401
|
3.5
|
122.2
|
1.0
|
PB
|
B:ADP401
|
3.6
|
130.7
|
1.0
|
O1A
|
B:ADP401
|
3.7
|
126.0
|
1.0
|
OE1
|
B:GLN137
|
3.8
|
125.5
|
1.0
|
OD2
|
B:ASP11
|
4.0
|
130.8
|
1.0
|
OD2
|
B:ASP154
|
4.2
|
125.1
|
1.0
|
CD
|
B:GLN137
|
4.3
|
118.8
|
1.0
|
NE2
|
B:GLN137
|
4.4
|
115.6
|
1.0
|
O3A
|
B:ADP401
|
4.5
|
123.7
|
1.0
|
PA
|
B:ADP401
|
4.6
|
126.3
|
1.0
|
OD1
|
B:ASP11
|
4.6
|
135.8
|
1.0
|
CA
|
B:GLY13
|
4.6
|
118.0
|
1.0
|
CG
|
B:ASP11
|
4.7
|
131.3
|
1.0
|
CA
|
B:GLY156
|
4.8
|
113.0
|
1.0
|
O2B
|
B:ADP401
|
4.8
|
129.6
|
1.0
|
CG2
|
B:VAL339
|
4.9
|
103.7
|
1.0
|
OD1
|
B:ASP154
|
5.0
|
123.1
|
1.0
|
|
Magnesium binding site 3 out
of 5 in 8v30
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Magnesium Binding Sites List in 8v30
Magnesium binding site 3 out
of 5 in the Smooth Muscle Gamma Actin (ACTG2) Filament Mutant R40C
![](/pictures/MG/pdb/v3/8v30-MG-sphere_03.jpg) Mono view
![](/pictures/MG/pdb/v3/8v30-MG-sphere_03_stereo.jpg) Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Smooth Muscle Gamma Actin (ACTG2) Filament Mutant R40C within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg401
b:89.9
occ:1.00
|
O1B
|
C:ADP402
|
2.7
|
120.7
|
1.0
|
O3B
|
C:ADP402
|
3.5
|
118.2
|
1.0
|
PB
|
C:ADP402
|
3.6
|
125.9
|
1.0
|
O1A
|
C:ADP402
|
3.7
|
121.7
|
1.0
|
OE1
|
C:GLN137
|
3.8
|
127.1
|
1.0
|
OD2
|
C:ASP11
|
4.0
|
125.6
|
1.0
|
OD2
|
C:ASP154
|
4.2
|
125.7
|
1.0
|
CD
|
C:GLN137
|
4.3
|
119.5
|
1.0
|
NE2
|
C:GLN137
|
4.4
|
118.1
|
1.0
|
O3A
|
C:ADP402
|
4.5
|
121.5
|
1.0
|
PA
|
C:ADP402
|
4.6
|
122.6
|
1.0
|
CA
|
C:GLY13
|
4.6
|
113.6
|
1.0
|
OD1
|
C:ASP11
|
4.7
|
128.7
|
1.0
|
CA
|
C:GLY156
|
4.7
|
104.4
|
1.0
|
CG
|
C:ASP11
|
4.8
|
123.9
|
1.0
|
O2B
|
C:ADP402
|
4.9
|
124.2
|
1.0
|
CG2
|
C:VAL339
|
4.9
|
96.8
|
1.0
|
OD1
|
C:ASP154
|
5.0
|
123.1
|
1.0
|
|
Magnesium binding site 4 out
of 5 in 8v30
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Magnesium Binding Sites List in 8v30
Magnesium binding site 4 out
of 5 in the Smooth Muscle Gamma Actin (ACTG2) Filament Mutant R40C
![](/pictures/MG/pdb/v3/8v30-MG-sphere_04.jpg) Mono view
![](/pictures/MG/pdb/v3/8v30-MG-sphere_04_stereo.jpg) Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Smooth Muscle Gamma Actin (ACTG2) Filament Mutant R40C within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg402
b:93.7
occ:1.00
|
O1B
|
D:ADP401
|
2.6
|
123.2
|
1.0
|
O3B
|
D:ADP401
|
3.4
|
114.4
|
1.0
|
PB
|
D:ADP401
|
3.5
|
122.8
|
1.0
|
O1A
|
D:ADP401
|
3.7
|
121.0
|
1.0
|
OE1
|
D:GLN137
|
3.8
|
128.9
|
1.0
|
OD2
|
D:ASP11
|
4.1
|
128.8
|
1.0
|
OD2
|
D:ASP154
|
4.2
|
123.3
|
1.0
|
CD
|
D:GLN137
|
4.4
|
121.5
|
1.0
|
O3A
|
D:ADP401
|
4.4
|
124.8
|
1.0
|
NE2
|
D:GLN137
|
4.5
|
118.6
|
1.0
|
PA
|
D:ADP401
|
4.6
|
123.5
|
1.0
|
CA
|
D:GLY13
|
4.6
|
110.2
|
1.0
|
OD1
|
D:ASP11
|
4.7
|
132.2
|
1.0
|
CA
|
D:GLY156
|
4.7
|
103.3
|
1.0
|
CG
|
D:ASP11
|
4.8
|
127.4
|
1.0
|
O2B
|
D:ADP401
|
4.8
|
123.5
|
1.0
|
CG2
|
D:VAL339
|
5.0
|
98.7
|
1.0
|
OD1
|
D:ASP154
|
5.0
|
120.9
|
1.0
|
|
Magnesium binding site 5 out
of 5 in 8v30
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Magnesium Binding Sites List in 8v30
Magnesium binding site 5 out
of 5 in the Smooth Muscle Gamma Actin (ACTG2) Filament Mutant R40C
![](/pictures/MG/pdb/v3/8v30-MG-sphere_05.jpg) Mono view
![](/pictures/MG/pdb/v3/8v30-MG-sphere_05_stereo.jpg) Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Smooth Muscle Gamma Actin (ACTG2) Filament Mutant R40C within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg402
b:94.4
occ:1.00
|
O1B
|
E:ADP401
|
2.5
|
126.7
|
1.0
|
O3B
|
E:ADP401
|
3.3
|
122.5
|
1.0
|
PB
|
E:ADP401
|
3.4
|
128.3
|
1.0
|
O1A
|
E:ADP401
|
3.5
|
125.0
|
1.0
|
OE1
|
E:GLN137
|
4.0
|
125.7
|
1.0
|
OD2
|
E:ASP11
|
4.1
|
135.6
|
1.0
|
O3A
|
E:ADP401
|
4.4
|
130.0
|
1.0
|
OD2
|
E:ASP154
|
4.4
|
128.9
|
1.0
|
PA
|
E:ADP401
|
4.4
|
129.1
|
1.0
|
CA
|
E:GLY13
|
4.5
|
116.8
|
1.0
|
CD
|
E:GLN137
|
4.5
|
120.8
|
1.0
|
NE2
|
E:GLN137
|
4.6
|
119.2
|
1.0
|
O2B
|
E:ADP401
|
4.7
|
125.6
|
1.0
|
CA
|
E:GLY156
|
4.7
|
102.7
|
1.0
|
OD1
|
E:ASP11
|
4.7
|
135.4
|
1.0
|
CG
|
E:ASP11
|
4.8
|
133.4
|
1.0
|
NZ
|
E:LYS18
|
4.9
|
110.0
|
1.0
|
|
Reference:
R.H.Ceron,
F.A.Baez-Cruz,
N.J.Palmer,
P.J.Carman,
M.Boczkowska,
R.O.Heuckeroth,
E.M.Ostap,
R.Dominguez.
Molecular Mechanisms of ACTG2 Mutations Linked to Visceral Myopathy To Be Published.
Page generated: Fri Oct 4 21:56:17 2024
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