Magnesium in PDB 8voi: Haddock Models of Active Human Alpham I-Domain Bound to the the C- Terminal Domain of the Cytokine Pleiotrophin

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Haddock Models of Active Human Alpham I-Domain Bound to the the C- Terminal Domain of the Cytokine Pleiotrophin (pdb code 8voi). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Haddock Models of Active Human Alpham I-Domain Bound to the the C- Terminal Domain of the Cytokine Pleiotrophin, PDB code: 8voi:

Magnesium binding site 1 out of 1 in 8voi

Go back to Magnesium Binding Sites List in 8voi
Magnesium binding site 1 out of 1 in the Haddock Models of Active Human Alpham I-Domain Bound to the the C- Terminal Domain of the Cytokine Pleiotrophin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Haddock Models of Active Human Alpham I-Domain Bound to the the C- Terminal Domain of the Cytokine Pleiotrophin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg400

b:10.0
occ:1.00
OD2 A:ASP242 1.5 10.0 1.0
OE2 B:GLU98 1.7 10.0 1.0
OG1 A:THR209 2.0 10.0 1.0
OG A:SER142 2.1 10.0 1.0
HG1 A:THR209 2.3 10.0 1.0
OG A:SER144 2.7 10.0 1.0
HG A:SER142 2.8 10.0 1.0
CG A:ASP242 2.8 10.0 1.0
HG A:SER144 2.9 10.0 1.0
CD B:GLU98 2.9 10.0 1.0
CB A:SER142 3.0 10.0 1.0
HB3 A:SER142 3.2 10.0 1.0
HB2 A:SER142 3.2 10.0 1.0
OD2 A:ASP140 3.3 10.0 1.0
CB A:THR209 3.4 10.0 1.0
OE1 B:GLU98 3.4 10.0 1.0
HB3 A:ASP242 3.5 10.0 1.0
OD1 A:ASP140 3.5 10.0 1.0
OD1 A:ASP242 3.7 10.0 1.0
HG23 A:THR209 3.7 10.0 1.0
CB A:ASP242 3.8 10.0 1.0
O A:GLU244 3.8 10.0 1.0
CG A:ASP140 3.8 10.0 1.0
CG2 A:THR209 3.9 10.0 1.0
HG21 A:THR209 3.9 10.0 1.0
HB A:THR209 3.9 10.0 1.0
H A:SER144 4.0 10.0 1.0
CB A:SER144 4.0 10.0 1.0
HG12 A:ILE145 4.1 10.0 1.0
HB3 A:SER144 4.1 10.0 1.0
CG B:GLU98 4.2 10.0 1.0
HB2 A:ASP242 4.3 10.0 1.0
HG3 B:GLU98 4.3 10.0 1.0
H A:SER142 4.3 10.0 1.0
CA A:THR209 4.4 10.0 1.0
HA A:THR209 4.4 10.0 1.0
H A:ASP242 4.4 10.0 1.0
HG2 B:GLU98 4.4 10.0 1.0
CA A:SER142 4.4 10.0 1.0
N A:THR209 4.6 10.0 1.0
HB2 A:SER144 4.6 10.0 1.0
O B:HIS95 4.7 10.0 1.0
O A:ARG208 4.7 10.0 1.0
C A:ARG208 4.7 10.0 1.0
N A:SER144 4.8 10.0 1.0
H A:GLU244 4.8 10.0 1.0
H A:PHE246 4.8 10.0 1.0
N A:SER142 4.8 10.0 1.0
H A:GLY143 4.8 10.0 1.0
HG1 A:THR241 4.9 10.0 1.0
HD11 A:ILE145 4.9 10.0 1.0
CA A:SER144 4.9 10.0 1.0
HG22 A:THR209 4.9 10.0 1.0
H A:THR209 5.0 10.0 1.0
C A:GLU244 5.0 10.0 1.0

Reference:

X.Wang, H.Nguyen. uc(Nmr) Structure of Alpham I-Domain of Integrin Mac-1 in Complex with the Cytokine Pleiotrophin To Be Published.
Page generated: Fri Oct 4 22:13:53 2024

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