Magnesium in PDB 8wck: Fcp Tetramer in Chaetoceros Gracilis

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40;

Binding sites:

The binding sites of Magnesium atom in the Fcp Tetramer in Chaetoceros Gracilis (pdb code 8wck). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 40 binding sites of Magnesium where determined in the Fcp Tetramer in Chaetoceros Gracilis, PDB code: 8wck:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 40 in the Fcp Tetramer in Chaetoceros Gracilis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Fcp Tetramer in Chaetoceros Gracilis within 5.0Å range: probe atom residue distance (Å) B Occ 1:Mg307 b:68.4 occ:1.00 MG 1:CLA307 0.0 68.4 1.0 NB 1:CLA307 2.0 68.4 1.0 ND 1:CLA307 2.0 68.4 1.0 NC 1:CLA307 2.1 68.4 1.0 NA 1:CLA307 2.1 68.4 1.0 C4D 1:CLA307 2.9 68.4 1.0 OE2 1:GLU64 3.0 64.0 1.0 C1B 1:CLA307 3.0 68.4 1.0 C4A 1:CLA307 3.0 68.4 1.0 C4B 1:CLA307 3.1 68.4 1.0 C1C 1:CLA307 3.1 68.4 1.0 C4C 1:CLA307 3.1 68.4 1.0 C1D 1:CLA307 3.1 68.4 1.0 C1A 1:CLA307 3.2 68.4 1.0 CHB 1:CLA307 3.4 68.4 1.0 CD 1:GLU64 3.4 64.0 1.0 CHC 1:CLA307 3.4 68.4 1.0 CHA 1:CLA307 3.5 68.4 1.0 CHD 1:CLA307 3.5 68.4 1.0 OE1 1:GLU64 3.8 64.0 1.0 NE 1:ARG168 4.1 64.3 1.0 CG 1:GLU64 4.2 64.0 1.0 C3D 1:CLA307 4.3 68.4 1.0 C2B 1:CLA307 4.3 68.4 1.0 C3B 1:CLA307 4.3 68.4 1.0 C2C 1:CLA307 4.3 68.4 1.0 C2D 1:CLA307 4.4 68.4 1.0 C3C 1:CLA307 4.4 68.4 1.0 C3A 1:CLA307 4.4 68.4 1.0 C2A 1:CLA307 4.5 68.4 1.0 NH2 1:ARG168 4.6 64.3 1.0 C37 1:A86303 4.7 68.4 1.0 CZ 1:ARG168 4.7 64.3 1.0 CG 1:ARG168 4.9 64.3 1.0 CD 1:ARG168 4.9 64.3 1.0 CBD 1:CLA307 4.9 68.4 1.0 CB 1:GLU64 5.0 64.0 1.0

Magnesium binding site 2 out of 40 in the Fcp Tetramer in Chaetoceros Gracilis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Fcp Tetramer in Chaetoceros Gracilis within 5.0Å range: probe atom residue distance (Å) B Occ 1:Mg308 b:70.7 occ:1.00 MG 1:KC2308 0.0 70.7 1.0 ND 1:KC2308 2.0 70.7 1.0 NB 1:KC2308 2.0 70.7 1.0 NC 1:KC2308 2.1 70.7 1.0 NA 1:KC2308 2.1 70.7 1.0 NE2 1:HIS67 2.8 60.4 1.0 C4D 1:KC2308 2.9 70.7 1.0 C1B 1:KC2308 3.0 70.7 1.0 C4B 1:KC2308 3.0 70.7 1.0 C1D 1:KC2308 3.0 70.7 1.0 C4A 1:KC2308 3.1 70.7 1.0 C4C 1:KC2308 3.1 70.7 1.0 C1C 1:KC2308 3.1 70.7 1.0 C1A 1:KC2308 3.1 70.7 1.0 CHB 1:KC2308 3.4 70.7 1.0 CHA 1:KC2308 3.5 70.7 1.0 CHD 1:KC2308 3.5 70.7 1.0 CHC 1:KC2308 3.5 70.7 1.0 CE1 1:HIS67 3.6 60.4 1.0 CD2 1:HIS67 3.8 60.4 1.0 C3D 1:KC2308 4.1 70.7 1.0 C2D 1:KC2308 4.2 70.7 1.0 C2B 1:KC2308 4.2 70.7 1.0 C3B 1:KC2308 4.2 70.7 1.0 C3A 1:KC2308 4.3 70.7 1.0 C2C 1:KC2308 4.3 70.7 1.0 C3C 1:KC2308 4.3 70.7 1.0 C2A 1:KC2308 4.3 70.7 1.0 ND1 1:HIS67 4.7 60.4 1.0 C25 1:A86305 4.8 87.2 1.0 CG 1:HIS67 4.8 60.4 1.0 CBD 1:KC2308 4.9 70.7 1.0 C26 1:A86305 5.0 87.2 1.0

Magnesium binding site 3 out of 40 in the Fcp Tetramer in Chaetoceros Gracilis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Fcp Tetramer in Chaetoceros Gracilis within 5.0Å range: probe atom residue distance (Å) B Occ 1:Mg309 b:64.3 occ:1.00 MG 1:CLA309 0.0 64.3 1.0 NB 1:CLA309 2.0 64.3 1.0 ND 1:CLA309 2.0 64.3 1.0 NC 1:CLA309 2.1 64.3 1.0 NA 1:CLA309 2.1 64.3 1.0 NE2 1:HIS81 2.8 65.2 1.0 C4D 1:CLA309 2.9 64.3 1.0 C1B 1:CLA309 3.0 64.3 1.0 C4A 1:CLA309 3.0 64.3 1.0 C4B 1:CLA309 3.1 64.3 1.0 C1C 1:CLA309 3.1 64.3 1.0 C4C 1:CLA309 3.1 64.3 1.0 C1A 1:CLA309 3.1 64.3 1.0 C1D 1:CLA309 3.2 64.3 1.0 CHB 1:CLA309 3.4 64.3 1.0 CHC 1:CLA309 3.4 64.3 1.0 CHA 1:CLA309 3.5 64.3 1.0 CHD 1:CLA309 3.5 64.3 1.0 CE1 1:HIS81 3.7 65.2 1.0 C2 1:CLA309 3.7 64.3 1.0 CD2 1:HIS81 3.9 65.2 1.0 O2A 1:CLA309 4.0 64.3 1.0 C1 1:CLA309 4.2 64.3 1.0 C3 1:CLA309 4.2 64.3 1.0 C3D 1:CLA309 4.3 64.3 1.0 C2B 1:CLA309 4.3 64.3 1.0 C3B 1:CLA309 4.3 64.3 1.0 C2C 1:CLA309 4.3 64.3 1.0 C2D 1:CLA309 4.4 64.3 1.0 C3C 1:CLA309 4.4 64.3 1.0 C3A 1:CLA309 4.4 64.3 1.0 C2A 1:CLA309 4.5 64.3 1.0 C5 1:CLA309 4.5 64.3 1.0 C6 1:CLA309 4.7 64.3 1.0 ND1 1:HIS81 4.9 65.2 1.0 CA 1:GLY77 4.9 64.3 1.0 CGA 1:CLA309 4.9 64.3 1.0 CBD 1:CLA309 4.9 64.3 1.0 CG 1:HIS81 5.0 65.2 1.0

Magnesium binding site 4 out of 40 in the Fcp Tetramer in Chaetoceros Gracilis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Fcp Tetramer in Chaetoceros Gracilis within 5.0Å range: probe atom residue distance (Å) B Occ 1:Mg310 b:68.4 occ:1.00 MG 1:KC2310 0.0 68.4 1.0 ND 1:KC2310 2.0 68.4 1.0 NB 1:KC2310 2.0 68.4 1.0 NC 1:KC2310 2.1 68.4 1.0 NA 1:KC2310 2.1 68.4 1.0 C4D 1:KC2310 2.9 68.4 1.0 NE2 1:GLN119 2.9 65.3 1.0 C1B 1:KC2310 3.0 68.4 1.0 C4B 1:KC2310 3.0 68.4 1.0 C1D 1:KC2310 3.0 68.4 1.0 C4A 1:KC2310 3.1 68.4 1.0 C4C 1:KC2310 3.1 68.4 1.0 C1C 1:KC2310 3.1 68.4 1.0 C1A 1:KC2310 3.1 68.4 1.0 OE1 1:GLN119 3.4 65.3 1.0 CD 1:GLN119 3.4 65.3 1.0 CHB 1:KC2310 3.4 68.4 1.0 CHA 1:KC2310 3.5 68.4 1.0 CHC 1:KC2310 3.5 68.4 1.0 CHD 1:KC2310 3.5 68.4 1.0 C3D 1:KC2310 4.1 68.4 1.0 C2D 1:KC2310 4.2 68.4 1.0 C2B 1:KC2310 4.2 68.4 1.0 C3B 1:KC2310 4.2 68.4 1.0 C2C 1:KC2310 4.3 68.4 1.0 C3A 1:KC2310 4.3 68.4 1.0 C3C 1:KC2310 4.3 68.4 1.0 C2A 1:KC2310 4.4 68.4 1.0 C26 1:A86302 4.6 68.2 1.0 C25 1:A86302 4.6 68.2 1.0 C27 1:A86302 4.7 68.2 1.0 CG 1:GLN119 4.7 65.3 1.0 C28 1:A86302 4.9 68.2 1.0 CB 1:GLN119 4.9 65.3 1.0 CBD 1:KC2310 4.9 68.4 1.0

Magnesium binding site 5 out of 40 in the Fcp Tetramer in Chaetoceros Gracilis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Fcp Tetramer in Chaetoceros Gracilis within 5.0Å range: probe atom residue distance (Å) B Occ 1:Mg311 b:66.4 occ:1.00 MG 1:KC1311 0.0 66.4 1.0 ND 1:KC1311 2.0 66.4 1.0 NB 1:KC1311 2.0 66.4 1.0 NC 1:KC1311 2.0 66.4 1.0 NA 1:KC1311 2.0 66.4 1.0 C4D 1:KC1311 2.9 66.4 1.0 C1B 1:KC1311 2.9 66.4 1.0 OE1 1:GLU128 3.0 64.3 1.0 C4B 1:KC1311 3.0 66.4 1.0 C1D 1:KC1311 3.0 66.4 1.0 C4A 1:KC1311 3.0 66.4 1.0 C1C 1:KC1311 3.1 66.4 1.0 C4C 1:KC1311 3.1 66.4 1.0 C1A 1:KC1311 3.1 66.4 1.0 CHB 1:KC1311 3.4 66.4 1.0 CHC 1:KC1311 3.4 66.4 1.0 CHD 1:KC1311 3.5 66.4 1.0 CHA 1:KC1311 3.5 66.4 1.0 C8 1:LMT317 3.7 76.3 1.0 CD 1:GLU128 3.9 64.3 1.0 C6 1:LMT317 3.9 76.3 1.0 C3D 1:KC1311 4.1 66.4 1.0 C7 1:LMT317 4.1 76.3 1.0 C2D 1:KC1311 4.1 66.4 1.0 C2B 1:KC1311 4.2 66.4 1.0 C3B 1:KC1311 4.2 66.4 1.0 CG 1:GLU128 4.2 64.3 1.0 C3A 1:KC1311 4.3 66.4 1.0 C3C 1:KC1311 4.3 66.4 1.0 C2C 1:KC1311 4.3 66.4 1.0 C2A 1:KC1311 4.3 66.4 1.0 NZ 1:LYS66 4.4 61.9 1.0 C9 1:LMT317 4.6 76.3 1.0 CB 1:GLU128 4.8 64.3 1.0 CMD 1:KC2308 4.9 70.7 1.0 OE2 1:GLU128 4.9 64.3 1.0 CBD 1:KC1311 4.9 66.4 1.0 CE 1:LYS66 4.9 61.9 1.0

Magnesium binding site 6 out of 40 in the Fcp Tetramer in Chaetoceros Gracilis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Fcp Tetramer in Chaetoceros Gracilis within 5.0Å range: probe atom residue distance (Å) B Occ 1:Mg312 b:67.6 occ:1.00 MG 1:CLA312 0.0 67.6 1.0 NB 1:CLA312 2.0 67.6 1.0 ND 1:CLA312 2.0 67.6 1.0 NC 1:CLA312 2.1 67.6 1.0 NA 1:CLA312 2.1 67.6 1.0 C4D 1:CLA312 2.9 67.6 1.0 OE2 1:GLU163 2.9 64.3 1.0 C1B 1:CLA312 3.0 67.6 1.0 C4A 1:CLA312 3.0 67.6 1.0 C4B 1:CLA312 3.1 67.6 1.0 C1C 1:CLA312 3.1 67.6 1.0 C4C 1:CLA312 3.1 67.6 1.0 C1D 1:CLA312 3.1 67.6 1.0 C1A 1:CLA312 3.2 67.6 1.0 C37 1:A86304 3.3 68.6 1.0 CHB 1:CLA312 3.4 67.6 1.0 CHC 1:CLA312 3.4 67.6 1.0 CHA 1:CLA312 3.5 67.6 1.0 CHD 1:CLA312 3.5 67.6 1.0 CD 1:GLU163 3.6 64.3 1.0 CG 1:GLU163 4.2 64.3 1.0 C3D 1:CLA312 4.2 67.6 1.0 C2B 1:CLA312 4.3 67.6 1.0 C3B 1:CLA312 4.3 67.6 1.0 C2C 1:CLA312 4.3 67.6 1.0 C2D 1:CLA312 4.3 67.6 1.0 C3C 1:CLA312 4.4 67.6 1.0 OE1 1:GLU163 4.4 64.3 1.0 C3A 1:CLA312 4.4 67.6 1.0 C2A 1:CLA312 4.5 67.6 1.0 NE 1:ARG69 4.5 62.0 1.0 C36 1:A86304 4.5 68.6 1.0 C35 1:A86304 4.6 68.6 1.0 NH2 1:ARG69 4.6 62.0 1.0 CB 1:GLU163 4.9 64.3 1.0 CBD 1:CLA312 4.9 67.6 1.0 CZ 1:ARG69 4.9 62.0 1.0

Magnesium binding site 7 out of 40 in the Fcp Tetramer in Chaetoceros Gracilis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Fcp Tetramer in Chaetoceros Gracilis within 5.0Å range: probe atom residue distance (Å) B Occ 1:Mg313 b:67.5 occ:1.00 MG 1:KC1313 0.0 67.5 1.0 ND 1:KC1313 2.0 67.5 1.0 NB 1:KC1313 2.0 67.5 1.0 NC 1:KC1313 2.0 67.5 1.0 NA 1:KC1313 2.1 67.5 1.0 C4D 1:KC1313 2.9 67.5 1.0 C1B 1:KC1313 2.9 67.5 1.0 C4B 1:KC1313 3.0 67.5 1.0 C1D 1:KC1313 3.0 67.5 1.0 ND2 1:ASN166 3.0 63.9 1.0 C4C 1:KC1313 3.1 67.5 1.0 C1C 1:KC1313 3.1 67.5 1.0 C4A 1:KC1313 3.1 67.5 1.0 C1A 1:KC1313 3.1 67.5 1.0 CHB 1:KC1313 3.4 67.5 1.0 CHC 1:KC1313 3.4 67.5 1.0 CHA 1:KC1313 3.4 67.5 1.0 CHD 1:KC1313 3.5 67.5 1.0 C9 2:CLA401 3.6 77.0 1.0 CG 1:ASN166 3.8 63.9 1.0 OD1 1:ASN166 3.9 63.9 1.0 C8 2:CLA401 4.0 77.0 1.0 C3D 1:KC1313 4.1 67.5 1.0 C2D 1:KC1313 4.1 67.5 1.0 C2B 1:KC1313 4.2 67.5 1.0 C3B 1:KC1313 4.2 67.5 1.0 C3A 1:KC1313 4.3 67.5 1.0 C3C 1:KC1313 4.3 67.5 1.0 C2C 1:KC1313 4.3 67.5 1.0 C2A 1:KC1313 4.3 67.5 1.0 C10 2:CLA401 4.7 77.0 1.0 C24 1:A86306 4.8 77.0 1.0 CBD 1:KC1313 4.9 67.5 1.0

Magnesium binding site 8 out of 40 in the Fcp Tetramer in Chaetoceros Gracilis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Fcp Tetramer in Chaetoceros Gracilis within 5.0Å range: probe atom residue distance (Å) B Occ 1:Mg314 b:79.9 occ:1.00 MG 1:CLA314 0.0 79.9 1.0 NB 1:CLA314 2.0 79.9 1.0 ND 1:CLA314 2.0 79.9 1.0 NC 1:CLA314 2.1 79.9 1.0 NA 1:CLA314 2.1 79.9 1.0 C4D 1:CLA314 2.9 79.9 1.0 C1B 1:CLA314 3.0 79.9 1.0 C4A 1:CLA314 3.0 79.9 1.0 C4B 1:CLA314 3.1 79.9 1.0 C1C 1:CLA314 3.1 79.9 1.0 C4C 1:CLA314 3.1 79.9 1.0 C1A 1:CLA314 3.1 79.9 1.0 C1D 1:CLA314 3.2 79.9 1.0 CHB 1:CLA314 3.4 79.9 1.0 CHC 1:CLA314 3.4 79.9 1.0 CHA 1:CLA314 3.5 79.9 1.0 CHD 1:CLA314 3.5 79.9 1.0 C3D 1:CLA314 4.3 79.9 1.0 C2B 1:CLA314 4.3 79.9 1.0 C3B 1:CLA314 4.3 79.9 1.0 C2C 1:CLA314 4.3 79.9 1.0 C2D 1:CLA314 4.4 79.9 1.0 C3C 1:CLA314 4.4 79.9 1.0 C3A 1:CLA314 4.4 79.9 1.0 C2A 1:CLA314 4.5 79.9 1.0 CA 1:GLY176 4.7 73.5 1.0 O 1:GLY176 4.8 73.5 1.0 C21 1:A86304 4.9 68.6 1.0 CBD 1:CLA314 4.9 79.9 1.0

Magnesium binding site 9 out of 40 in the Fcp Tetramer in Chaetoceros Gracilis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Fcp Tetramer in Chaetoceros Gracilis within 5.0Å range: probe atom residue distance (Å) B Occ 1:Mg315 b:90.4 occ:1.00 MG 1:CLA315 0.0 90.4 1.0 NB 1:CLA315 2.0 90.4 1.0 ND 1:CLA315 2.0 90.4 1.0 NC 1:CLA315 2.1 90.4 1.0 NA 1:CLA315 2.1 90.4 1.0 C4D 1:CLA315 2.9 90.4 1.0 C1B 1:CLA315 3.0 90.4 1.0 C4A 1:CLA315 3.0 90.4 1.0 C4B 1:CLA315 3.1 90.4 1.0 C1C 1:CLA315 3.1 90.4 1.0 C4C 1:CLA315 3.1 90.4 1.0 C1A 1:CLA315 3.2 90.4 1.0 C1D 1:CLA315 3.2 90.4 1.0 CHB 1:CLA315 3.4 90.4 1.0 CHC 1:CLA315 3.4 90.4 1.0 CHA 1:CLA315 3.5 90.4 1.0 CHD 1:CLA315 3.5 90.4 1.0 C3D 1:CLA315 4.3 90.4 1.0 C2B 1:CLA315 4.3 90.4 1.0 C3B 1:CLA315 4.3 90.4 1.0 C2C 1:CLA315 4.3 90.4 1.0 C2D 1:CLA315 4.4 90.4 1.0 C3C 1:CLA315 4.4 90.4 1.0 C3A 1:CLA315 4.4 90.4 1.0 C2A 1:CLA315 4.5 90.4 1.0 CG2 1:ILE109 4.8 75.9 1.0 CBD 1:CLA315 4.9 90.4 1.0

Magnesium binding site 10 out of 40 in the Fcp Tetramer in Chaetoceros Gracilis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Fcp Tetramer in Chaetoceros Gracilis within 5.0Å range: probe atom residue distance (Å) B Occ 1:Mg318 b:77.0 occ:1.00 MG 1:CLA318 0.0 77.0 1.0 NB 1:CLA318 2.0 77.0 1.0 ND 1:CLA318 2.0 77.0 1.0 NC 1:CLA318 2.1 77.0 1.0 NA 1:CLA318 2.1 77.0 1.0 C4D 1:CLA318 2.9 77.0 1.0 C1B 1:CLA318 3.0 77.0 1.0 C4A 1:CLA318 3.0 77.0 1.0 NE1 1:TRP131 3.0 64.7 1.0 C4B 1:CLA318 3.1 77.0 1.0 C1C 1:CLA318 3.1 77.0 1.0 C4C 1:CLA318 3.1 77.0 1.0 C1A 1:CLA318 3.1 77.0 1.0 C1D 1:CLA318 3.2 77.0 1.0 CHB 1:CLA318 3.4 77.0 1.0 CHC 1:CLA318 3.4 77.0 1.0 CHA 1:CLA318 3.5 77.0 1.0 CD1 1:TRP131 3.5 64.7 1.0 CHD 1:CLA318 3.5 77.0 1.0 CE2 1:TRP131 4.1 64.7 1.0 C3D 1:CLA318 4.3 77.0 1.0 C2B 1:CLA318 4.3 77.0 1.0 C3B 1:CLA318 4.3 77.0 1.0 C2C 1:CLA318 4.3 77.0 1.0 C2D 1:CLA318 4.4 77.0 1.0 C3C 1:CLA318 4.4 77.0 1.0 C3A 1:CLA318 4.4 77.0 1.0 O 4:GLU39 4.4 73.6 1.0 C2A 1:CLA318 4.5 77.0 1.0 O2 4:A86301 4.6 77.7 1.0 CG 1:TRP131 4.6 64.7 1.0 CZ2 1:TRP131 4.8 64.7 1.0 CBD 1:CLA318 4.9 77.0 1.0 CD2 1:TRP131 5.0 64.7 1.0

C.Zhou, Y.Feng, Z.Li, L.Shen, X.Li, Y.Wang, G.Han, T.Kuang, C.Liu, J.R.Shen, W.Wang. Structural and Spectroscopic Insights Into Fucoxanthin Chlorophyll A/C-Binding Proteins of Diatoms in Diverse Oligomeric States. Plant Commun. 01041 2024.
ISSN: ISSN 2590-3462
PubMed: 39030906
DOI: 10.1016/J.XPLC.2024.101041