Magnesium in PDB 8wej: Structure of Human Phagocyte Nadph Oxidase in the Activated State

The structure of Structure of Human Phagocyte Nadph Oxidase in the Activated State also contains other interesting chemical elements:

Iron

(Fe)

2 atoms

The binding sites of Magnesium atom in the Structure of Human Phagocyte Nadph Oxidase in the Activated State (pdb code 8wej). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of Human Phagocyte Nadph Oxidase in the Activated State, PDB code: 8wej:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of Human Phagocyte Nadph Oxidase in the Activated State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Human Phagocyte Nadph Oxidase in the Activated State within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg605 b:22.2 occ:1.00 O1P B:FDA607 2.2 23.4 1.0 OD1 B:ASP360 2.4 25.5 1.0 O1A B:FDA607 2.4 23.4 1.0 CG B:ASP360 3.3 25.5 1.0 OD2 B:ASP360 3.4 25.5 1.0 P B:FDA607 3.5 23.4 1.0 PA B:FDA607 3.6 23.4 1.0 O3P B:FDA607 3.7 23.4 1.0 CE1 B:HIS338 4.0 20.6 1.0 N B:TRP361 4.3 24.4 1.0 C8A B:FDA607 4.3 23.4 1.0 N7A B:FDA607 4.3 23.4 1.0 CB B:TRP361 4.4 24.4 1.0 OE1 B:GLU336 4.4 23.2 1.0 O2P B:FDA607 4.4 23.4 1.0 O2A B:FDA607 4.4 23.4 1.0 O5' B:FDA607 4.6 23.4 1.0 NE2 B:HIS338 4.6 20.6 1.0 CB B:ASP360 4.7 25.5 1.0 N B:ASP360 4.8 25.5 1.0 O5B B:FDA607 4.8 23.4 1.0 OE1 B:GLU203 4.9 29.9 1.0 CA B:TRP361 5.0 24.4 1.0

Magnesium binding site 2 out of 2 in the Structure of Human Phagocyte Nadph Oxidase in the Activated State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of Human Phagocyte Nadph Oxidase in the Activated State within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg201 b:47.8 occ:1.00 O2B E:GTP200 2.0 52.3 1.0 OG1 E:THR35 2.0 50.0 1.0 O3G E:GTP200 2.1 52.3 1.0 OG1 E:THR17 2.2 49.6 1.0 CB E:THR35 2.4 50.0 1.0 PG E:GTP200 3.0 52.3 1.0 O1G E:GTP200 3.1 52.3 1.0 PB E:GTP200 3.1 52.3 1.0 OD2 E:ASP57 3.2 47.4 1.0 CG2 E:THR35 3.4 50.0 1.0 O3B E:GTP200 3.5 52.3 1.0 CA E:THR35 3.5 50.0 1.0 N E:THR35 3.5 50.0 1.0 CB E:THR17 3.6 49.6 1.0 CG E:ASP57 3.7 47.4 1.0 OD1 E:ASP57 3.7 47.4 1.0 O1B E:GTP200 3.8 52.3 1.0 O E:THR58 4.0 46.3 1.0 N E:THR17 4.0 49.6 1.0 CA E:THR17 4.3 49.6 1.0 O2G E:GTP200 4.4 52.3 1.0 O E:THR35 4.4 50.0 1.0 O3A E:GTP200 4.4 52.3 1.0 O2A E:GTP200 4.4 52.3 1.0 C E:THR35 4.5 50.0 1.0 CG2 E:THR17 4.5 49.6 1.0 CE E:LYS16 4.6 46.3 1.0 O E:ILE33 4.6 56.2 1.0 NZ E:LYS16 4.7 46.3 1.0 CB E:LYS16 4.7 46.3 1.0 C E:PRO34 4.8 51.9 1.0 C E:THR58 4.8 46.3 1.0 PA E:GTP200 4.8 52.3 1.0 CB E:ASP57 4.9 47.4 1.0

L.Chen, X.Liu, R.Liu. Activation Mechanism of Phagocyte Nadph Oxidase By Cytosolic Factors To Be Published.