Magnesium in PDB 8wey: Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137)
Other elements in 8wey:
The structure of Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137) also contains other interesting chemical elements:
Magnesium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
30;
Page 4, Binding sites: 31 -
40;
Page 5, Binding sites: 41 -
50;
Page 6, Binding sites: 51 -
60;
Page 7, Binding sites: 61 -
70;
Page 8, Binding sites: 71 -
80;
Page 9, Binding sites: 81 -
90;
Page 10, Binding sites: 91 -
100;
Page 11, Binding sites: 101 -
110;
Page 12, Binding sites: 111 -
120;
Page 13, Binding sites: 121 -
130;
Page 14, Binding sites: 131 -
140;
Page 15, Binding sites: 141 -
150;
Page 16, Binding sites: 151 -
154;
Binding sites:
The binding sites of Magnesium atom in the Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137)
(pdb code 8wey). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 154 binding sites of Magnesium where determined in the
Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137), PDB code: 8wey:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 154 in 8wey
Go back to
Magnesium Binding Sites List in 8wey
Magnesium binding site 1 out
of 154 in the Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg801
b:21.5
occ:1.00
|
MG
|
A:CL0801
|
0.0
|
21.5
|
1.0
|
ND
|
A:CL0801
|
2.0
|
22.2
|
1.0
|
NB
|
A:CL0801
|
2.0
|
22.1
|
1.0
|
NC
|
A:CL0801
|
2.1
|
23.0
|
1.0
|
NA
|
A:CL0801
|
2.1
|
21.9
|
1.0
|
NE2
|
A:HIS673
|
2.3
|
22.4
|
1.0
|
C4D
|
A:CL0801
|
3.0
|
21.7
|
1.0
|
C4A
|
A:CL0801
|
3.0
|
21.4
|
1.0
|
C4B
|
A:CL0801
|
3.0
|
22.1
|
1.0
|
C1B
|
A:CL0801
|
3.0
|
21.7
|
1.0
|
C1C
|
A:CL0801
|
3.0
|
22.2
|
1.0
|
C1A
|
A:CL0801
|
3.1
|
22.1
|
1.0
|
C4C
|
A:CL0801
|
3.1
|
22.5
|
1.0
|
C1D
|
A:CL0801
|
3.2
|
22.2
|
1.0
|
CD2
|
A:HIS673
|
3.2
|
21.9
|
1.0
|
CE1
|
A:HIS673
|
3.3
|
22.9
|
1.0
|
CHB
|
A:CL0801
|
3.3
|
20.9
|
1.0
|
CHC
|
A:CL0801
|
3.4
|
22.1
|
1.0
|
CHA
|
A:CL0801
|
3.5
|
21.7
|
1.0
|
CHD
|
A:CL0801
|
3.6
|
22.1
|
1.0
|
CAB
|
B:CLA804
|
4.0
|
22.8
|
1.0
|
C3B
|
B:CLA804
|
4.0
|
22.0
|
1.0
|
CHC
|
B:CLA804
|
4.2
|
22.0
|
1.0
|
C3D
|
A:CL0801
|
4.2
|
22.5
|
1.0
|
C4B
|
B:CLA804
|
4.2
|
22.2
|
1.0
|
C3B
|
A:CL0801
|
4.3
|
23.1
|
1.0
|
C3A
|
A:CL0801
|
4.3
|
22.2
|
1.0
|
C2B
|
A:CL0801
|
4.3
|
22.2
|
1.0
|
C2C
|
A:CL0801
|
4.4
|
22.4
|
1.0
|
ND1
|
A:HIS673
|
4.4
|
23.1
|
1.0
|
CG
|
A:HIS673
|
4.4
|
22.0
|
1.0
|
C3C
|
A:CL0801
|
4.4
|
23.0
|
1.0
|
C2A
|
A:CL0801
|
4.4
|
22.7
|
1.0
|
C2D
|
A:CL0801
|
4.4
|
23.2
|
1.0
|
CMA
|
A:CL0801
|
4.8
|
22.3
|
1.0
|
C2B
|
B:CLA804
|
4.8
|
22.3
|
1.0
|
CED
|
B:CLA802
|
4.9
|
32.3
|
1.0
|
CBB
|
B:CLA804
|
4.9
|
24.1
|
1.0
|
CBD
|
A:CL0801
|
4.9
|
22.9
|
1.0
|
NB
|
B:CLA804
|
5.0
|
22.1
|
1.0
|
|
Magnesium binding site 2 out
of 154 in 8wey
Go back to
Magnesium Binding Sites List in 8wey
Magnesium binding site 2 out
of 154 in the Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg802
b:28.6
occ:1.00
|
MG
|
A:CLA802
|
0.0
|
28.6
|
1.0
|
ND
|
A:CLA802
|
2.0
|
30.8
|
1.0
|
NB
|
A:CLA802
|
2.0
|
30.8
|
1.0
|
NC
|
A:CLA802
|
2.1
|
29.9
|
1.0
|
NA
|
A:CLA802
|
2.1
|
32.9
|
1.0
|
NE2
|
A:HIS53
|
2.2
|
29.8
|
1.0
|
C4D
|
A:CLA802
|
3.0
|
30.9
|
1.0
|
C4A
|
A:CLA802
|
3.0
|
33.4
|
1.0
|
CE1
|
A:HIS53
|
3.0
|
30.4
|
1.0
|
C1C
|
A:CLA802
|
3.0
|
29.6
|
1.0
|
C1B
|
A:CLA802
|
3.0
|
30.4
|
1.0
|
C4B
|
A:CLA802
|
3.0
|
30.1
|
1.0
|
C1A
|
A:CLA802
|
3.1
|
33.6
|
1.0
|
C4C
|
A:CLA802
|
3.1
|
29.5
|
1.0
|
C1D
|
A:CLA802
|
3.2
|
29.7
|
1.0
|
CD2
|
A:HIS53
|
3.3
|
28.3
|
1.0
|
CHB
|
A:CLA802
|
3.4
|
32.1
|
1.0
|
CHC
|
A:CLA802
|
3.4
|
29.2
|
1.0
|
CHA
|
A:CLA802
|
3.5
|
33.0
|
1.0
|
CHD
|
A:CLA802
|
3.6
|
30.6
|
1.0
|
ND1
|
A:HIS53
|
4.2
|
30.5
|
1.0
|
C7
|
A:CLA809
|
4.3
|
57.5
|
1.0
|
C3D
|
A:CLA802
|
4.3
|
31.4
|
1.0
|
CG
|
A:HIS53
|
4.3
|
29.7
|
1.0
|
C3B
|
A:CLA802
|
4.3
|
29.9
|
1.0
|
C3A
|
A:CLA802
|
4.4
|
35.7
|
1.0
|
C2C
|
A:CLA802
|
4.4
|
30.2
|
1.0
|
C2B
|
A:CLA802
|
4.4
|
30.6
|
1.0
|
C2A
|
A:CLA802
|
4.4
|
37.7
|
1.0
|
C3C
|
A:CLA802
|
4.4
|
29.9
|
1.0
|
C2D
|
A:CLA802
|
4.5
|
30.2
|
1.0
|
CBB
|
A:CLA803
|
4.7
|
28.9
|
1.0
|
C6
|
A:CLA809
|
4.9
|
57.8
|
1.0
|
C5
|
A:CLA809
|
4.9
|
55.9
|
1.0
|
CBD
|
A:CLA802
|
4.9
|
34.5
|
1.0
|
CMA
|
A:CLA802
|
5.0
|
38.0
|
1.0
|
|
Magnesium binding site 3 out
of 154 in 8wey
Go back to
Magnesium Binding Sites List in 8wey
Magnesium binding site 3 out
of 154 in the Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg803
b:23.4
occ:1.00
|
MG
|
A:CLA803
|
0.0
|
23.4
|
1.0
|
NB
|
A:CLA803
|
2.0
|
24.6
|
1.0
|
ND
|
A:CLA803
|
2.0
|
24.8
|
1.0
|
NC
|
A:CLA803
|
2.1
|
24.3
|
1.0
|
NA
|
A:CLA803
|
2.1
|
25.5
|
1.0
|
NE2
|
A:HIS73
|
2.1
|
23.6
|
1.0
|
CD2
|
A:HIS73
|
2.9
|
22.4
|
1.0
|
C4D
|
A:CLA803
|
3.0
|
24.2
|
1.0
|
C4B
|
A:CLA803
|
3.0
|
25.5
|
1.0
|
C4A
|
A:CLA803
|
3.0
|
25.6
|
1.0
|
C1B
|
A:CLA803
|
3.0
|
25.4
|
1.0
|
C1C
|
A:CLA803
|
3.0
|
24.8
|
1.0
|
C1A
|
A:CLA803
|
3.1
|
25.2
|
1.0
|
CMB
|
A:CLA828
|
3.1
|
25.0
|
1.0
|
C4C
|
A:CLA803
|
3.1
|
24.1
|
1.0
|
C1D
|
A:CLA803
|
3.2
|
24.3
|
1.0
|
CE1
|
A:HIS73
|
3.2
|
23.6
|
1.0
|
CHB
|
A:CLA803
|
3.4
|
26.1
|
1.0
|
CHC
|
A:CLA803
|
3.4
|
25.1
|
1.0
|
CHA
|
A:CLA803
|
3.5
|
24.9
|
1.0
|
CHD
|
A:CLA803
|
3.6
|
23.1
|
1.0
|
CG
|
A:HIS73
|
4.1
|
23.7
|
1.0
|
ND1
|
A:HIS73
|
4.2
|
23.2
|
1.0
|
C3D
|
A:CLA803
|
4.2
|
24.6
|
1.0
|
C3B
|
A:CLA803
|
4.3
|
27.0
|
1.0
|
C2B
|
A:CLA803
|
4.3
|
27.2
|
1.0
|
C3A
|
A:CLA803
|
4.3
|
27.9
|
1.0
|
C2A
|
A:CLA803
|
4.4
|
27.6
|
1.0
|
CG2
|
A:ILE69
|
4.4
|
26.6
|
1.0
|
C2C
|
A:CLA803
|
4.4
|
25.6
|
1.0
|
C3C
|
A:CLA803
|
4.4
|
24.3
|
1.0
|
C2D
|
A:CLA803
|
4.4
|
23.6
|
1.0
|
C2B
|
A:CLA828
|
4.6
|
25.1
|
1.0
|
CBB
|
A:CLA828
|
4.8
|
26.6
|
1.0
|
CAA
|
A:CLA803
|
4.8
|
32.5
|
1.0
|
CBD
|
A:CLA803
|
4.9
|
25.0
|
1.0
|
|
Magnesium binding site 4 out
of 154 in 8wey
Go back to
Magnesium Binding Sites List in 8wey
Magnesium binding site 4 out
of 154 in the Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg804
b:25.5
occ:1.00
|
MG
|
A:CLA804
|
0.0
|
25.5
|
1.0
|
OE1
|
A:GLN76
|
2.0
|
26.4
|
1.0
|
ND
|
A:CLA804
|
2.0
|
27.8
|
1.0
|
NB
|
A:CLA804
|
2.0
|
25.6
|
1.0
|
NC
|
A:CLA804
|
2.1
|
26.7
|
1.0
|
NA
|
A:CLA804
|
2.1
|
27.1
|
1.0
|
C4D
|
A:CLA804
|
3.0
|
28.3
|
1.0
|
C4B
|
A:CLA804
|
3.0
|
25.7
|
1.0
|
CD
|
A:GLN76
|
3.0
|
25.0
|
1.0
|
C4A
|
A:CLA804
|
3.0
|
26.0
|
1.0
|
C1C
|
A:CLA804
|
3.0
|
25.0
|
1.0
|
C1B
|
A:CLA804
|
3.0
|
26.8
|
1.0
|
C1A
|
A:CLA804
|
3.1
|
28.4
|
1.0
|
C4C
|
A:CLA804
|
3.1
|
25.9
|
1.0
|
C1D
|
A:CLA804
|
3.2
|
27.0
|
1.0
|
CHC
|
A:CLA804
|
3.4
|
24.9
|
1.0
|
CHB
|
A:CLA804
|
3.4
|
26.0
|
1.0
|
CHA
|
A:CLA804
|
3.5
|
28.5
|
1.0
|
NE2
|
A:GLN76
|
3.5
|
25.2
|
1.0
|
CHD
|
A:CLA804
|
3.6
|
27.1
|
1.0
|
C16
|
A:CLA804
|
3.7
|
41.1
|
1.0
|
C17
|
A:CLA804
|
3.8
|
42.0
|
1.0
|
C3D
|
A:CLA804
|
4.2
|
30.1
|
1.0
|
CG
|
A:GLN76
|
4.3
|
25.7
|
1.0
|
C3B
|
A:CLA804
|
4.3
|
26.3
|
1.0
|
C2B
|
A:CLA804
|
4.3
|
26.4
|
1.0
|
C3A
|
A:CLA804
|
4.4
|
27.7
|
1.0
|
C2C
|
A:CLA804
|
4.4
|
26.2
|
1.0
|
C2A
|
A:CLA804
|
4.4
|
29.0
|
1.0
|
C3C
|
A:CLA804
|
4.4
|
26.2
|
1.0
|
C2D
|
A:CLA804
|
4.4
|
28.9
|
1.0
|
CMA
|
A:CLA803
|
4.5
|
26.5
|
1.0
|
C19
|
A:CLA804
|
4.8
|
43.5
|
1.0
|
C18
|
A:CLA804
|
4.9
|
43.5
|
1.0
|
CBD
|
A:CLA804
|
4.9
|
31.8
|
1.0
|
|
Magnesium binding site 5 out
of 154 in 8wey
Go back to
Magnesium Binding Sites List in 8wey
Magnesium binding site 5 out
of 154 in the Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg805
b:30.0
occ:1.00
|
MG
|
A:CLA805
|
0.0
|
30.0
|
1.0
|
ND
|
A:CLA805
|
2.0
|
30.6
|
1.0
|
NB
|
A:CLA805
|
2.0
|
31.8
|
1.0
|
NC
|
A:CLA805
|
2.1
|
32.3
|
1.0
|
NA
|
A:CLA805
|
2.1
|
30.9
|
1.0
|
NE2
|
A:HIS90
|
2.3
|
36.9
|
1.0
|
C4D
|
A:CLA805
|
3.0
|
31.6
|
1.0
|
C4B
|
A:CLA805
|
3.0
|
31.4
|
1.0
|
C1B
|
A:CLA805
|
3.0
|
30.7
|
1.0
|
C4A
|
A:CLA805
|
3.0
|
30.3
|
1.0
|
C1C
|
A:CLA805
|
3.0
|
30.9
|
1.0
|
C1A
|
A:CLA805
|
3.1
|
30.4
|
1.0
|
C4C
|
A:CLA805
|
3.1
|
33.0
|
1.0
|
C1D
|
A:CLA805
|
3.2
|
32.0
|
1.0
|
CE1
|
A:HIS90
|
3.3
|
37.0
|
1.0
|
CD2
|
A:HIS90
|
3.3
|
33.4
|
1.0
|
CHB
|
A:CLA805
|
3.4
|
31.5
|
1.0
|
CHC
|
A:CLA805
|
3.4
|
31.9
|
1.0
|
CHA
|
A:CLA805
|
3.5
|
30.7
|
1.0
|
CHD
|
A:CLA805
|
3.6
|
33.8
|
1.0
|
C7
|
A:LMT848
|
3.8
|
71.3
|
1.0
|
C3D
|
A:CLA805
|
4.3
|
31.8
|
1.0
|
C3B
|
A:CLA805
|
4.3
|
33.2
|
1.0
|
C2B
|
A:CLA805
|
4.3
|
31.9
|
1.0
|
C2C
|
A:CLA805
|
4.4
|
35.1
|
1.0
|
C3A
|
A:CLA805
|
4.4
|
33.0
|
1.0
|
C2A
|
A:CLA805
|
4.4
|
33.4
|
1.0
|
C3C
|
A:CLA805
|
4.4
|
35.9
|
1.0
|
ND1
|
A:HIS90
|
4.4
|
36.8
|
1.0
|
C2D
|
A:CLA805
|
4.5
|
32.3
|
1.0
|
CG
|
A:HIS90
|
4.5
|
34.2
|
1.0
|
C8
|
A:LMT848
|
4.6
|
75.4
|
1.0
|
C6
|
A:LMT848
|
4.9
|
69.5
|
1.0
|
C9
|
A:LMT848
|
4.9
|
78.7
|
1.0
|
CBD
|
A:CLA805
|
4.9
|
31.5
|
1.0
|
|
Magnesium binding site 6 out
of 154 in 8wey
Go back to
Magnesium Binding Sites List in 8wey
Magnesium binding site 6 out
of 154 in the Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg806
b:26.3
occ:1.00
|
MG
|
A:CLA806
|
0.0
|
26.3
|
1.0
|
ND
|
A:CLA806
|
2.0
|
27.3
|
1.0
|
NB
|
A:CLA806
|
2.0
|
27.5
|
1.0
|
NC
|
A:CLA806
|
2.1
|
26.8
|
1.0
|
NA
|
A:CLA806
|
2.1
|
28.1
|
1.0
|
OE1
|
A:GLN112
|
2.1
|
27.9
|
1.0
|
C4D
|
A:CLA806
|
3.0
|
27.0
|
1.0
|
C4B
|
A:CLA806
|
3.0
|
28.3
|
1.0
|
C4A
|
A:CLA806
|
3.0
|
27.8
|
1.0
|
C1C
|
A:CLA806
|
3.0
|
26.0
|
1.0
|
C1B
|
A:CLA806
|
3.0
|
27.7
|
1.0
|
C1A
|
A:CLA806
|
3.1
|
27.0
|
1.0
|
CD
|
A:GLN112
|
3.1
|
28.6
|
1.0
|
C4C
|
A:CLA806
|
3.1
|
26.5
|
1.0
|
C1D
|
A:CLA806
|
3.2
|
26.5
|
1.0
|
CHB
|
A:CLA806
|
3.4
|
29.0
|
1.0
|
CHC
|
A:CLA806
|
3.4
|
26.6
|
1.0
|
NE2
|
A:GLN112
|
3.4
|
29.6
|
1.0
|
CHA
|
A:CLA806
|
3.5
|
27.5
|
1.0
|
CHD
|
A:CLA806
|
3.6
|
25.1
|
1.0
|
C4
|
A:CLA826
|
4.1
|
67.6
|
1.0
|
C3D
|
A:CLA806
|
4.3
|
27.7
|
1.0
|
C3B
|
A:CLA806
|
4.3
|
29.5
|
1.0
|
C2B
|
A:CLA806
|
4.3
|
29.9
|
1.0
|
C3A
|
A:CLA806
|
4.3
|
28.8
|
1.0
|
C2C
|
A:CLA806
|
4.4
|
26.3
|
1.0
|
C5
|
A:CLA826
|
4.4
|
64.9
|
1.0
|
C2A
|
A:CLA806
|
4.4
|
29.6
|
1.0
|
C3C
|
A:CLA806
|
4.4
|
25.7
|
1.0
|
C6
|
A:CLA826
|
4.4
|
66.4
|
1.0
|
C2D
|
A:CLA806
|
4.5
|
26.9
|
1.0
|
CG
|
A:GLN112
|
4.5
|
30.4
|
1.0
|
C3
|
A:CLA826
|
4.6
|
62.8
|
1.0
|
CB
|
A:GLN112
|
4.9
|
30.6
|
1.0
|
CBD
|
A:CLA806
|
4.9
|
27.6
|
1.0
|
|
Magnesium binding site 7 out
of 154 in 8wey
Go back to
Magnesium Binding Sites List in 8wey
Magnesium binding site 7 out
of 154 in the Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg807
b:26.6
occ:1.00
|
MG
|
A:CLA807
|
0.0
|
26.6
|
1.0
|
ND
|
A:CLA807
|
2.0
|
26.1
|
1.0
|
NB
|
A:CLA807
|
2.0
|
28.6
|
1.0
|
NC
|
A:CLA807
|
2.1
|
26.7
|
1.0
|
OE1
|
A:GLN120
|
2.1
|
27.5
|
1.0
|
NA
|
A:CLA807
|
2.1
|
28.5
|
1.0
|
C4D
|
A:CLA807
|
3.0
|
27.5
|
1.0
|
C1B
|
A:CLA807
|
3.0
|
28.1
|
1.0
|
C4B
|
A:CLA807
|
3.0
|
27.4
|
1.0
|
C4A
|
A:CLA807
|
3.0
|
29.8
|
1.0
|
C1C
|
A:CLA807
|
3.0
|
26.7
|
1.0
|
C1A
|
A:CLA807
|
3.1
|
29.4
|
1.0
|
C4C
|
A:CLA807
|
3.1
|
26.6
|
1.0
|
C1D
|
A:CLA807
|
3.2
|
26.6
|
1.0
|
CD
|
A:GLN120
|
3.2
|
27.8
|
1.0
|
CHB
|
A:CLA807
|
3.3
|
29.9
|
1.0
|
CHC
|
A:CLA807
|
3.4
|
27.2
|
1.0
|
C20
|
A:CLA826
|
3.5
|
60.2
|
1.0
|
CHA
|
A:CLA807
|
3.5
|
27.9
|
1.0
|
CHD
|
A:CLA807
|
3.6
|
26.5
|
1.0
|
NE2
|
A:GLN120
|
3.7
|
27.7
|
1.0
|
C18
|
A:CLA826
|
3.8
|
60.4
|
1.0
|
C3D
|
A:CLA807
|
4.2
|
27.1
|
1.0
|
C3B
|
A:CLA807
|
4.3
|
29.2
|
1.0
|
C2B
|
A:CLA807
|
4.3
|
29.5
|
1.0
|
C2C
|
A:CLA807
|
4.4
|
27.7
|
1.0
|
C3A
|
A:CLA807
|
4.4
|
31.7
|
1.0
|
C2A
|
A:CLA807
|
4.4
|
33.2
|
1.0
|
C2D
|
A:CLA807
|
4.4
|
26.7
|
1.0
|
C3C
|
A:CLA807
|
4.4
|
26.8
|
1.0
|
CG
|
A:GLN120
|
4.5
|
28.2
|
1.0
|
CB
|
A:GLN120
|
4.6
|
29.1
|
1.0
|
C19
|
A:CLA826
|
4.6
|
59.6
|
1.0
|
CBD
|
A:CLA807
|
4.9
|
28.4
|
1.0
|
|
Magnesium binding site 8 out
of 154 in 8wey
Go back to
Magnesium Binding Sites List in 8wey
Magnesium binding site 8 out
of 154 in the Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg808
b:34.1
occ:1.00
|
MG
|
A:CLA808
|
0.0
|
34.1
|
1.0
|
ND
|
A:CLA808
|
2.0
|
37.1
|
1.0
|
NB
|
A:CLA808
|
2.0
|
34.1
|
1.0
|
NC
|
A:CLA808
|
2.1
|
36.7
|
1.0
|
NA
|
A:CLA808
|
2.1
|
36.4
|
1.0
|
NE2
|
A:HIS176
|
2.3
|
31.1
|
1.0
|
C1C
|
A:CLA808
|
3.0
|
34.5
|
1.0
|
C4D
|
A:CLA808
|
3.0
|
37.0
|
1.0
|
C4A
|
A:CLA808
|
3.0
|
37.4
|
1.0
|
C1B
|
A:CLA808
|
3.0
|
34.2
|
1.0
|
C4B
|
A:CLA808
|
3.0
|
34.5
|
1.0
|
C1A
|
A:CLA808
|
3.1
|
39.0
|
1.0
|
C4C
|
A:CLA808
|
3.1
|
34.9
|
1.0
|
CE1
|
A:HIS176
|
3.2
|
29.9
|
1.0
|
C1D
|
A:CLA808
|
3.2
|
36.8
|
1.0
|
CHC
|
A:CLA808
|
3.4
|
33.6
|
1.0
|
CD2
|
A:HIS176
|
3.4
|
29.3
|
1.0
|
CHB
|
A:CLA808
|
3.4
|
35.0
|
1.0
|
CHA
|
A:CLA808
|
3.5
|
38.4
|
1.0
|
CHD
|
A:CLA808
|
3.7
|
36.7
|
1.0
|
C34
|
3:UNL303
|
3.8
|
78.5
|
1.0
|
C3D
|
A:CLA808
|
4.3
|
38.2
|
1.0
|
C2C
|
A:CLA808
|
4.3
|
36.5
|
1.0
|
C3B
|
A:CLA808
|
4.3
|
36.5
|
1.0
|
C2B
|
A:CLA808
|
4.3
|
34.8
|
1.0
|
ND1
|
A:HIS176
|
4.4
|
29.9
|
1.0
|
C3A
|
A:CLA808
|
4.4
|
39.5
|
1.0
|
C2A
|
A:CLA808
|
4.4
|
42.1
|
1.0
|
C3C
|
A:CLA808
|
4.4
|
36.5
|
1.0
|
C32
|
3:UNL303
|
4.4
|
83.6
|
1.0
|
CG
|
A:HIS176
|
4.5
|
29.6
|
1.0
|
C2D
|
A:CLA808
|
4.5
|
38.2
|
1.0
|
C33
|
3:UNL303
|
4.5
|
81.6
|
1.0
|
C35
|
3:UNL303
|
4.5
|
75.5
|
1.0
|
CBD
|
A:CLA808
|
4.9
|
41.9
|
1.0
|
C36
|
3:UNL303
|
4.9
|
73.1
|
1.0
|
|
Magnesium binding site 9 out
of 154 in 8wey
Go back to
Magnesium Binding Sites List in 8wey
Magnesium binding site 9 out
of 154 in the Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg809
b:31.9
occ:1.00
|
MG
|
A:CLA809
|
0.0
|
31.9
|
1.0
|
ND
|
A:CLA809
|
2.0
|
32.6
|
1.0
|
NB
|
A:CLA809
|
2.0
|
33.6
|
1.0
|
NC
|
A:CLA809
|
2.1
|
32.4
|
1.0
|
NA
|
A:CLA809
|
2.1
|
34.4
|
1.0
|
NE2
|
A:HIS178
|
2.2
|
31.8
|
1.0
|
O1A
|
A:CLA802
|
2.8
|
44.9
|
1.0
|
C4D
|
A:CLA809
|
3.0
|
34.0
|
1.0
|
C1B
|
A:CLA809
|
3.0
|
34.2
|
1.0
|
C4A
|
A:CLA809
|
3.0
|
33.0
|
1.0
|
C1C
|
A:CLA809
|
3.0
|
32.5
|
1.0
|
C4B
|
A:CLA809
|
3.0
|
35.8
|
1.0
|
C1A
|
A:CLA809
|
3.1
|
34.3
|
1.0
|
C4C
|
A:CLA809
|
3.1
|
32.1
|
1.0
|
CE1
|
A:HIS178
|
3.2
|
32.6
|
1.0
|
C1D
|
A:CLA809
|
3.2
|
31.6
|
1.0
|
CD2
|
A:HIS178
|
3.3
|
31.0
|
1.0
|
CHB
|
A:CLA809
|
3.4
|
33.4
|
1.0
|
CHC
|
A:CLA809
|
3.4
|
33.1
|
1.0
|
CHA
|
A:CLA809
|
3.5
|
35.3
|
1.0
|
CHD
|
A:CLA809
|
3.6
|
31.9
|
1.0
|
CGA
|
A:CLA802
|
3.9
|
47.7
|
1.0
|
C3D
|
A:CLA809
|
4.2
|
34.2
|
1.0
|
ND1
|
A:HIS178
|
4.3
|
32.6
|
1.0
|
C2B
|
A:CLA809
|
4.3
|
35.3
|
1.0
|
C3B
|
A:CLA809
|
4.3
|
36.8
|
1.0
|
C2C
|
A:CLA809
|
4.4
|
32.8
|
1.0
|
CG
|
A:HIS178
|
4.4
|
31.8
|
1.0
|
C2A
|
A:CLA809
|
4.4
|
37.1
|
1.0
|
C3A
|
A:CLA809
|
4.4
|
33.9
|
1.0
|
C3C
|
A:CLA809
|
4.4
|
33.5
|
1.0
|
C2D
|
A:CLA809
|
4.4
|
34.0
|
1.0
|
C1
|
A:CLA802
|
4.5
|
60.3
|
1.0
|
O2A
|
A:CLA802
|
4.6
|
55.3
|
1.0
|
CBA
|
A:CLA809
|
4.8
|
39.6
|
1.0
|
CD2
|
A:TYR177
|
4.8
|
33.4
|
1.0
|
CBD
|
A:CLA809
|
4.9
|
36.4
|
1.0
|
CD1
|
A:TRP174
|
4.9
|
32.4
|
1.0
|
|
Magnesium binding site 10 out
of 154 in 8wey
Go back to
Magnesium Binding Sites List in 8wey
Magnesium binding site 10 out
of 154 in the Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Psi-Lhci of the Red Alga Cyanidium Caldarium Rk-1 (Nies-2137) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg810
b:33.6
occ:1.00
|
MG
|
A:CLA810
|
0.0
|
33.6
|
1.0
|
ND
|
A:CLA810
|
2.0
|
35.1
|
1.0
|
NB
|
A:CLA810
|
2.1
|
35.5
|
1.0
|
NC
|
A:CLA810
|
2.1
|
35.4
|
1.0
|
NA
|
A:CLA810
|
2.1
|
36.0
|
1.0
|
NE2
|
A:HIS196
|
2.1
|
27.8
|
1.0
|
C4D
|
A:CLA810
|
2.9
|
35.7
|
1.0
|
C1C
|
A:CLA810
|
3.0
|
34.7
|
1.0
|
CD2
|
A:HIS196
|
3.0
|
27.6
|
1.0
|
C4B
|
A:CLA810
|
3.0
|
35.6
|
1.0
|
C4A
|
A:CLA810
|
3.0
|
35.1
|
1.0
|
C1B
|
A:CLA810
|
3.0
|
35.0
|
1.0
|
C1A
|
A:CLA810
|
3.1
|
36.9
|
1.0
|
C4C
|
A:CLA810
|
3.1
|
36.1
|
1.0
|
CE1
|
A:HIS196
|
3.2
|
27.7
|
1.0
|
C1D
|
A:CLA810
|
3.2
|
35.9
|
1.0
|
CHB
|
A:CLA810
|
3.4
|
36.4
|
1.0
|
CHC
|
A:CLA810
|
3.4
|
34.7
|
1.0
|
CHA
|
A:CLA810
|
3.4
|
34.9
|
1.0
|
C2
|
A:CLA810
|
3.6
|
91.4
|
1.0
|
CHD
|
A:CLA810
|
3.6
|
36.6
|
1.0
|
C1
|
A:CLA810
|
3.8
|
87.3
|
1.0
|
O2A
|
A:CLA810
|
3.9
|
79.0
|
1.0
|
CG
|
A:HIS196
|
4.2
|
28.5
|
1.0
|
C3D
|
A:CLA810
|
4.2
|
36.5
|
1.0
|
ND1
|
A:HIS196
|
4.2
|
27.0
|
1.0
|
C3
|
A:CLA810
|
4.3
|
98.7
|
1.0
|
C3B
|
A:CLA810
|
4.4
|
36.1
|
1.0
|
C2C
|
A:CLA810
|
4.4
|
37.6
|
1.0
|
C2B
|
A:CLA810
|
4.4
|
35.9
|
1.0
|
C2A
|
A:CLA810
|
4.4
|
40.8
|
1.0
|
C3A
|
A:CLA810
|
4.4
|
36.6
|
1.0
|
C3C
|
A:CLA810
|
4.4
|
38.6
|
1.0
|
C2D
|
A:CLA810
|
4.4
|
36.9
|
1.0
|
CMC
|
A:CLA811
|
4.8
|
29.6
|
1.0
|
C5
|
A:CLA810
|
4.8
|
103.0
|
1.0
|
CBD
|
A:CLA810
|
4.9
|
34.3
|
1.0
|
CGA
|
A:CLA810
|
5.0
|
67.2
|
1.0
|
|
Reference:
K.Kato,
T.Hamaguchi,
M.Kumazawa,
Y.Nakajima,
K.Ifuku,
S.Hirooka,
S.Miyagishima,
T.Suzuki,
K.Kawakami,
N.Dohmae,
K.Yonekura,
J.R.Shen,
R.Nagao.
Structure of Psi-Lhci From Cyanidium Caldarium Provides Evolutionary Insights Into Conservation and Diversity of Red-Lineage Lhcs To Be Published.
Page generated: Fri Oct 4 23:14:43 2024
|