Magnesium in PDB 8wmm: Structure of CBCAS9-PCRIIC1 Complex Bound to 28-Bp Dna Substrate (20- Nt Complementary)

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of CBCAS9-PCRIIC1 Complex Bound to 28-Bp Dna Substrate (20- Nt Complementary) (pdb code 8wmm). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of CBCAS9-PCRIIC1 Complex Bound to 28-Bp Dna Substrate (20- Nt Complementary), PDB code: 8wmm:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 8wmm

Go back to Magnesium Binding Sites List in 8wmm
Magnesium binding site 1 out of 2 in the Structure of CBCAS9-PCRIIC1 Complex Bound to 28-Bp Dna Substrate (20- Nt Complementary)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of CBCAS9-PCRIIC1 Complex Bound to 28-Bp Dna Substrate (20- Nt Complementary) within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Mg201

b:72.7
occ:1.00
OD1 G:ASP99 2.7 107.3 1.0
CG G:ASP99 3.8 109.2 1.0
OD2 G:ASP99 4.3 111.8 1.0
OD1 G:ASP9 4.6 119.9 1.0
OD2 G:ASP118 4.7 115.3 1.0
OD2 G:ASP9 4.8 109.8 1.0
CB G:SER98 4.8 105.2 1.0
N G:ASP99 4.9 111.3 1.0
OG1 G:THR10 5.0 112.8 1.0

Magnesium binding site 2 out of 2 in 8wmm

Go back to Magnesium Binding Sites List in 8wmm
Magnesium binding site 2 out of 2 in the Structure of CBCAS9-PCRIIC1 Complex Bound to 28-Bp Dna Substrate (20- Nt Complementary)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of CBCAS9-PCRIIC1 Complex Bound to 28-Bp Dna Substrate (20- Nt Complementary) within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Mg201

b:52.4
occ:1.00
OD1 H:ASP99 2.7 107.3 1.0
CG H:ASP99 3.8 109.2 1.0
OD1 H:ASP9 4.3 119.9 1.0
OD2 H:ASP99 4.3 111.8 1.0
OD2 H:ASP9 4.4 109.8 1.0
OD2 H:ASP118 4.7 115.3 1.0
CG H:ASP9 4.8 117.0 1.0
OG1 H:THR10 4.8 112.8 1.0
N H:ASP99 4.9 111.3 1.0
CB H:SER98 4.9 105.2 1.0

Reference:

S.Zhang, S.Lin, J.J.G.Liu. Pro-Crispr PCRIIC1-Associated CAS9 System For Enhanced Bacterial Immunity Nature 2024.
ISSN: ESSN 1476-4687
DOI: 10.1038/S41586-024-07486-X
Page generated: Fri Oct 4 23:16:51 2024

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