Magnesium in PDB 8xih: Protein-Dna Complex

The binding sites of Magnesium atom in the Protein-Dna Complex (pdb code 8xih). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Protein-Dna Complex, PDB code: 8xih:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Protein-Dna Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Protein-Dna Complex within 5.0Å range: probe atom residue distance (Å) B Occ G:Mg101 b:25.8 occ:1.00 OP2 G:DT0 2.1 54.9 1.0 OP1 G:DA2 2.9 49.1 1.0 P G:DT0 3.4 59.5 1.0 OP2 G:DA2 3.6 35.3 1.0 P G:DA2 3.7 48.5 1.0 OP1 G:DT0 3.9 48.5 1.0 O5' G:DT0 4.2 57.5 1.0 O5' G:DA2 4.4 44.8 1.0 OE1 A:GLN496 4.5 90.7 1.0 C5' G:DT0 4.6 52.6 1.0 OE1 A:GLU541 4.9 68.9 1.0

Magnesium binding site 2 out of 2 in the Protein-Dna Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Protein-Dna Complex within 5.0Å range: probe atom residue distance (Å) B Occ H:Mg101 b:11.6 occ:1.00 OP1 H:DA3 2.0 26.2 1.0 OP2 H:DT1 2.3 37.4 1.0 P H:DT1 2.8 51.7 1.0 OE2 B:GLU541 3.4 69.8 1.0 P H:DA3 3.5 36.3 1.0 O5' H:DT1 3.9 37.5 1.0 OP1 H:DT1 3.9 42.0 1.0 C5' H:DT1 4.0 35.0 1.0 OP2 H:DA3 4.2 31.6 1.0 NE2 B:GLN496 4.2 70.1 1.0 O5' H:DA3 4.2 29.4 1.0 O3' H:DG2 4.5 25.6 1.0 CD B:GLU541 4.5 67.9 1.0 C5' H:DA3 4.6 22.0 1.0

L.Zhuang, Z.Li. N/A N/A.