Magnesium in PDB 8xkl: Structure of Acpii-Ccpii From Cryptophyte Algae

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 50; Page 6, Binding sites: 51 - 60; Page 7, Binding sites: 61 - 70; Page 8, Binding sites: 71 - 75;

Binding sites:

The binding sites of Magnesium atom in the Structure of Acpii-Ccpii From Cryptophyte Algae (pdb code 8xkl). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 75 binding sites of Magnesium where determined in the Structure of Acpii-Ccpii From Cryptophyte Algae, PDB code: 8xkl:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 75 in the Structure of Acpii-Ccpii From Cryptophyte Algae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Acpii-Ccpii From Cryptophyte Algae within 5.0Å range: probe atom residue distance (Å) B Occ 0:Mg601 b:144.2 occ:1.00 MG 0:CLA601 0.0 144.2 1.0 NB 0:CLA601 2.0 138.8 1.0 ND 0:CLA601 2.0 139.2 1.0 NC 0:CLA601 2.1 141.6 1.0 NA 0:CLA601 2.1 135.1 1.0 O 0:ALA54 2.6 135.6 1.0 C4D 0:CLA601 2.9 138.2 1.0 C1B 0:CLA601 3.0 138.3 1.0 C4A 0:CLA601 3.0 136.2 1.0 C4B 0:CLA601 3.1 137.8 1.0 C1C 0:CLA601 3.1 139.1 1.0 C4C 0:CLA601 3.1 137.6 1.0 C1A 0:CLA601 3.2 135.5 1.0 C1D 0:CLA601 3.2 133.3 1.0 CHB 0:CLA601 3.4 136.6 1.0 CHC 0:CLA601 3.4 137.2 1.0 CHA 0:CLA601 3.5 137.3 1.0 C 0:ALA54 3.5 136.4 1.0 CHD 0:CLA601 3.5 133.4 1.0 CA 0:ALA54 4.3 137.0 1.0 C3D 0:CLA601 4.3 136.6 1.0 C2B 0:CLA601 4.3 137.5 1.0 C3B 0:CLA601 4.3 138.9 1.0 C2C 0:CLA601 4.3 139.1 1.0 C2D 0:CLA601 4.4 133.2 1.0 C3C 0:CLA601 4.4 135.9 1.0 N 0:ILE55 4.4 141.8 1.0 C3A 0:CLA601 4.4 136.6 1.0 C2A 0:CLA601 4.5 138.2 1.0 CA 0:ILE55 4.5 142.3 1.0 CB 0:ALA54 4.7 134.7 1.0 CD 0:PRO56 4.9 143.3 1.0 CBD 0:CLA601 4.9 138.5 1.0

Magnesium binding site 2 out of 75 in the Structure of Acpii-Ccpii From Cryptophyte Algae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of Acpii-Ccpii From Cryptophyte Algae within 5.0Å range: probe atom residue distance (Å) B Occ 0:Mg602 b:82.6 occ:1.00 MG 0:CLA602 0.0 82.6 1.0 NB 0:CLA602 2.0 83.6 1.0 ND 0:CLA602 2.0 92.8 1.0 NA 0:CLA602 2.1 87.2 1.0 NC 0:CLA602 2.1 89.2 1.0 OE2 0:GLU92 2.6 77.2 1.0 C4D 0:CLA602 2.9 89.1 1.0 C1B 0:CLA602 3.0 90.0 1.0 C4A 0:CLA602 3.0 81.2 1.0 C4B 0:CLA602 3.1 81.1 1.0 C1C 0:CLA602 3.1 83.7 1.0 C4C 0:CLA602 3.1 93.5 1.0 C1A 0:CLA602 3.1 87.1 1.0 C1D 0:CLA602 3.2 89.2 1.0 CHB 0:CLA602 3.4 87.1 1.0 CHC 0:CLA602 3.4 84.6 1.0 C20 0:II0615 3.4 85.5 1.0 CD 0:GLU92 3.5 89.8 1.0 CHA 0:CLA602 3.5 83.8 1.0 CHD 0:CLA602 3.5 91.8 1.0 CG 0:GLU92 4.0 80.8 1.0 NE 0:ARG197 4.2 81.0 1.0 NH2 0:ARG197 4.2 87.9 1.0 C3D 0:CLA602 4.3 89.6 1.0 C2B 0:CLA602 4.3 84.3 1.0 C3B 0:CLA602 4.3 80.7 1.0 OE1 0:GLU92 4.3 90.3 1.0 C2C 0:CLA602 4.3 85.4 1.0 C2D 0:CLA602 4.4 86.1 1.0 C3C 0:CLA602 4.4 84.6 1.0 C3A 0:CLA602 4.4 80.6 1.0 C2A 0:CLA602 4.5 87.5 1.0 C1 0:CLA602 4.5 94.1 1.0 O1A 0:CLA602 4.5 93.5 1.0 CZ 0:ARG197 4.6 90.7 1.0 C14 0:II0615 4.8 81.7 1.0 CGA 0:CLA602 4.9 92.4 1.0 CBD 0:CLA602 4.9 77.5 1.0

Magnesium binding site 3 out of 75 in the Structure of Acpii-Ccpii From Cryptophyte Algae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Structure of Acpii-Ccpii From Cryptophyte Algae within 5.0Å range: probe atom residue distance (Å) B Occ 0:Mg603 b:94.5 occ:1.00 MG 0:CLA603 0.0 94.5 1.0 NB 0:CLA603 2.0 87.4 1.0 ND 0:CLA603 2.0 83.9 1.0 NA 0:CLA603 2.1 93.0 1.0 NC 0:CLA603 2.1 92.2 1.0 NE2 0:HIS95 2.9 71.3 1.0 C4D 0:CLA603 2.9 84.0 1.0 C1B 0:CLA603 3.0 91.8 1.0 C4A 0:CLA603 3.0 93.5 1.0 C4B 0:CLA603 3.1 90.7 1.0 C1C 0:CLA603 3.1 97.0 1.0 C4C 0:CLA603 3.1 87.9 1.0 C1A 0:CLA603 3.1 87.7 1.0 C1D 0:CLA603 3.1 83.5 1.0 CHB 0:CLA603 3.4 94.1 1.0 CHC 0:CLA603 3.4 95.3 1.0 CHA 0:CLA603 3.5 86.3 1.0 CE1 0:HIS95 3.5 69.9 1.0 CHD 0:CLA603 3.5 84.5 1.0 CD2 0:HIS95 4.0 66.5 1.0 C3D 0:CLA603 4.2 89.1 1.0 C2B 0:CLA603 4.3 95.2 1.0 C3B 0:CLA603 4.3 91.8 1.0 C2C 0:CLA603 4.3 91.4 1.0 C2D 0:CLA603 4.3 87.3 1.0 C3C 0:CLA603 4.4 89.6 1.0 C3A 0:CLA603 4.4 93.1 1.0 C2A 0:CLA603 4.5 90.4 1.0 ND1 0:HIS95 4.7 71.5 1.0 CBD 0:CLA603 4.9 97.2 1.0

Magnesium binding site 4 out of 75 in the Structure of Acpii-Ccpii From Cryptophyte Algae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Structure of Acpii-Ccpii From Cryptophyte Algae within 5.0Å range: probe atom residue distance (Å) B Occ 0:Mg604 b:107.3 occ:1.00 MG 0:CLA604 0.0 107.3 1.0 NB 0:CLA604 2.0 94.0 1.0 ND 0:CLA604 2.0 93.3 1.0 NC 0:CLA604 2.1 85.3 1.0 NA 0:CLA604 2.1 90.2 1.0 NE2 0:GLN109 2.7 88.6 1.0 C4D 0:CLA604 2.9 90.2 1.0 C1B 0:CLA604 3.0 89.9 1.0 C4A 0:CLA604 3.0 83.0 1.0 C4B 0:CLA604 3.1 91.8 1.0 C1C 0:CLA604 3.1 86.2 1.0 C4C 0:CLA604 3.1 84.2 1.0 C1A 0:CLA604 3.1 82.8 1.0 C1D 0:CLA604 3.2 89.1 1.0 C2 0:CLA604 3.3 92.6 1.0 CHB 0:CLA604 3.4 86.9 1.0 CHC 0:CLA604 3.4 90.6 1.0 CHA 0:CLA604 3.5 86.3 1.0 CHD 0:CLA604 3.5 90.8 1.0 O2A 0:CLA604 3.7 95.2 1.0 C1 0:CLA604 3.8 94.5 1.0 CD 0:GLN109 3.9 90.1 1.0 C3 0:CLA604 4.2 88.1 1.0 CG 0:GLN109 4.2 92.6 1.0 C3D 0:CLA604 4.3 86.0 1.0 C2B 0:CLA604 4.3 89.3 1.0 C3B 0:CLA604 4.3 88.7 1.0 C2C 0:CLA604 4.3 89.7 1.0 C2D 0:CLA604 4.4 82.7 1.0 C3C 0:CLA604 4.4 83.8 1.0 C3A 0:CLA604 4.4 79.2 1.0 C2A 0:CLA604 4.5 81.3 1.0 C5 0:CLA604 4.5 87.6 1.0 C38 p:II0301 4.7 101.4 1.0 CGA 0:CLA604 4.8 96.0 1.0 CA 0:GLY105 4.8 101.8 1.0 O 0:GLY105 4.9 108.7 1.0 OE1 0:GLN109 4.9 91.8 1.0 CBD 0:CLA604 4.9 87.0 1.0

Magnesium binding site 5 out of 75 in the Structure of Acpii-Ccpii From Cryptophyte Algae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Structure of Acpii-Ccpii From Cryptophyte Algae within 5.0Å range: probe atom residue distance (Å) B Occ 0:Mg605 b:93.0 occ:1.00 MG 0:CLA605 0.0 93.0 1.0 NB 0:CLA605 2.0 85.7 1.0 ND 0:CLA605 2.0 91.9 1.0 NA 0:CLA605 2.1 91.2 1.0 NC 0:CLA605 2.1 86.0 1.0 OE1 0:GLN141 2.8 92.2 1.0 C4D 0:CLA605 2.9 91.4 1.0 C1B 0:CLA605 3.0 83.9 1.0 C4A 0:CLA605 3.0 91.3 1.0 C4B 0:CLA605 3.0 92.3 1.0 C1C 0:CLA605 3.1 88.5 1.0 C4C 0:CLA605 3.1 87.0 1.0 CD 0:GLN141 3.1 88.4 1.0 C1A 0:CLA605 3.1 92.1 1.0 C1D 0:CLA605 3.2 90.5 1.0 CHB 0:CLA605 3.4 92.3 1.0 CHC 0:CLA605 3.4 91.5 1.0 CHA 0:CLA605 3.5 90.3 1.0 CHD 0:CLA605 3.5 90.8 1.0 NE2 0:GLN141 3.6 93.2 1.0 CG 0:GLN141 3.9 79.7 1.0 C3D 0:CLA605 4.3 93.3 1.0 C2B 0:CLA605 4.3 86.3 1.0 C3B 0:CLA605 4.3 92.6 1.0 C2C 0:CLA605 4.3 87.6 1.0 CB 0:GLN141 4.3 70.8 1.0 C2D 0:CLA605 4.4 91.5 1.0 C3C 0:CLA605 4.4 87.3 1.0 C3A 0:CLA605 4.4 88.2 1.0 NE1 0:TRP145 4.4 77.0 1.0 O2A p:CLA313 4.4 81.8 1.0 C2A 0:CLA605 4.4 86.9 1.0 O1A p:CLA313 4.6 88.6 1.0 CD1 0:TRP145 4.8 73.4 1.0 CBD 0:CLA605 4.9 87.3 1.0 C27 p:II0301 5.0 102.0 1.0

Magnesium binding site 6 out of 75 in the Structure of Acpii-Ccpii From Cryptophyte Algae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Structure of Acpii-Ccpii From Cryptophyte Algae within 5.0Å range: probe atom residue distance (Å) B Occ 0:Mg606 b:107.5 occ:1.00 MG 0:CLA606 0.0 107.5 1.0 NB 0:CLA606 2.0 98.3 1.0 ND 0:CLA606 2.0 99.5 1.0 NC 0:CLA606 2.1 95.5 1.0 NA 0:CLA606 2.1 93.0 1.0 C4D 0:CLA606 2.9 97.1 1.0 C1B 0:CLA606 3.0 99.6 1.0 CE1 0:HIS130 3.0 90.7 1.0 C4A 0:CLA606 3.0 96.3 1.0 C4B 0:CLA606 3.0 94.6 1.0 C1C 0:CLA606 3.1 93.5 1.0 C4C 0:CLA606 3.1 90.5 1.0 C1A 0:CLA606 3.2 91.2 1.0 C1D 0:CLA606 3.2 87.3 1.0 CHB 0:CLA606 3.4 100.5 1.0 CHC 0:CLA606 3.4 94.0 1.0 CHA 0:CLA606 3.5 95.7 1.0 CHD 0:CLA606 3.5 87.7 1.0 NE2 0:HIS130 3.6 94.7 1.0 C32 0:LMG618 4.0 101.5 1.0 ND1 0:HIS130 4.1 89.7 1.0 C30 0:LMG618 4.1 98.8 1.0 C2B 0:CLA606 4.3 96.1 1.0 C3D 0:CLA606 4.3 92.8 1.0 C31 0:LMG618 4.3 103.1 1.0 C3B 0:CLA606 4.3 95.5 1.0 C2C 0:CLA606 4.3 86.4 1.0 C2D 0:CLA606 4.4 90.5 1.0 C3C 0:CLA606 4.4 88.2 1.0 C3A 0:CLA606 4.4 96.1 1.0 C2A 0:CLA606 4.5 87.7 1.0 C16 0:IHT617 4.8 111.7 1.0 CD2 0:HIS130 4.8 96.9 1.0 C33 0:LMG618 4.9 100.8 1.0 CBD 0:CLA606 4.9 97.1 1.0

Magnesium binding site 7 out of 75 in the Structure of Acpii-Ccpii From Cryptophyte Algae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Structure of Acpii-Ccpii From Cryptophyte Algae within 5.0Å range: probe atom residue distance (Å) B Occ 0:Mg607 b:62.9 occ:1.00 MG 0:CLA607 0.0 62.9 1.0 NB 0:CLA607 2.0 66.2 1.0 ND 0:CLA607 2.0 71.7 1.0 NA 0:CLA607 2.1 61.5 1.0 NC 0:CLA607 2.1 71.4 1.0 OE2 0:GLU150 2.7 82.4 1.0 C4D 0:CLA607 2.9 68.7 1.0 C1B 0:CLA607 3.0 63.1 1.0 C4A 0:CLA607 3.0 73.8 1.0 C4B 0:CLA607 3.0 68.5 1.0 C1C 0:CLA607 3.1 75.7 1.0 C4C 0:CLA607 3.1 68.0 1.0 C1A 0:CLA607 3.1 67.3 1.0 C1D 0:CLA607 3.2 68.0 1.0 CD 0:GLU150 3.2 77.9 1.0 CHB 0:CLA607 3.4 70.8 1.0 CHC 0:CLA607 3.4 72.3 1.0 CHA 0:CLA607 3.5 68.0 1.0 CHD 0:CLA607 3.5 56.8 1.0 CG 0:GLU150 3.6 66.0 1.0 OE1 0:GLU150 4.1 84.0 1.0 CB 0:GLU150 4.2 63.9 1.0 C2B 0:CLA607 4.2 66.3 1.0 C3D 0:CLA607 4.3 66.0 1.0 C3B 0:CLA607 4.3 69.3 1.0 C2C 0:CLA607 4.3 75.4 1.0 C2D 0:CLA607 4.4 70.5 1.0 C3C 0:CLA607 4.4 70.3 1.0 C3A 0:CLA607 4.4 67.2 1.0 CMD 0:CLA603 4.4 91.9 1.0 C2A 0:CLA607 4.5 66.5 1.0 C15 9:CLA609 4.6 81.5 1.0 CBD 0:CLA607 4.9 62.9 1.0

Magnesium binding site 8 out of 75 in the Structure of Acpii-Ccpii From Cryptophyte Algae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Structure of Acpii-Ccpii From Cryptophyte Algae within 5.0Å range: probe atom residue distance (Å) B Occ 0:Mg608 b:103.2 occ:1.00 MG 0:CLA608 0.0 103.2 1.0 NB 0:CLA608 2.0 85.5 1.0 ND 0:CLA608 2.0 84.4 1.0 NC 0:CLA608 2.1 86.5 1.0 NA 0:CLA608 2.1 85.4 1.0 C4D 0:CLA608 2.9 82.1 1.0 C1B 0:CLA608 3.0 80.0 1.0 OE2 0:GLU192 3.0 82.6 1.0 C4A 0:CLA608 3.0 74.1 1.0 C4B 0:CLA608 3.1 86.3 1.0 C1C 0:CLA608 3.1 78.8 1.0 C20 0:IHT614 3.1 84.0 1.0 C4C 0:CLA608 3.1 83.2 1.0 C1A 0:CLA608 3.1 81.2 1.0 C1D 0:CLA608 3.2 84.5 1.0 CHB 0:CLA608 3.4 77.0 1.0 CHC 0:CLA608 3.4 84.6 1.0 CHA 0:CLA608 3.5 78.8 1.0 CHD 0:CLA608 3.5 84.5 1.0 CD 0:GLU192 3.6 73.6 1.0 OE1 0:GLU192 4.1 71.7 1.0 NE 0:ARG97 4.2 63.2 1.0 NH2 0:ARG97 4.2 65.2 1.0 C3D 0:CLA608 4.3 83.2 1.0 C2B 0:CLA608 4.3 80.7 1.0 C3B 0:CLA608 4.3 83.9 1.0 C2C 0:CLA608 4.3 73.9 1.0 C2D 0:CLA608 4.4 86.0 1.0 C3C 0:CLA608 4.4 78.8 1.0 C3A 0:CLA608 4.4 77.2 1.0 CG 0:GLU192 4.4 67.6 1.0 C2A 0:CLA608 4.4 79.9 1.0 C15 0:IHT614 4.6 85.6 1.0 CZ 0:ARG97 4.6 64.6 1.0 O2A 0:CLA608 4.8 90.3 1.0 CBD 0:CLA608 4.9 83.8 1.0 CBA 0:CLA608 4.9 87.2 1.0

Magnesium binding site 9 out of 75 in the Structure of Acpii-Ccpii From Cryptophyte Algae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Structure of Acpii-Ccpii From Cryptophyte Algae within 5.0Å range: probe atom residue distance (Å) B Occ 0:Mg609 b:103.6 occ:1.00 MG 0:CLA609 0.0 103.6 1.0 NB 0:CLA609 2.0 92.8 1.0 ND 0:CLA609 2.0 93.0 1.0 NC 0:CLA609 2.1 97.1 1.0 NA 0:CLA609 2.1 88.3 1.0 C4D 0:CLA609 2.9 87.5 1.0 C1B 0:CLA609 3.0 93.9 1.0 C4A 0:CLA609 3.0 91.0 1.0 C4B 0:CLA609 3.1 89.6 1.0 C1C 0:CLA609 3.1 92.4 1.0 C4C 0:CLA609 3.1 90.6 1.0 C1D 0:CLA609 3.1 88.4 1.0 C1A 0:CLA609 3.1 90.3 1.0 CHB 0:CLA609 3.4 91.7 1.0 CHC 0:CLA609 3.4 86.9 1.0 CHA 0:CLA609 3.5 85.0 1.0 CHD 0:CLA609 3.5 85.1 1.0 C3D 0:CLA609 4.2 91.1 1.0 C2B 0:CLA609 4.3 97.2 1.0 C3B 0:CLA609 4.3 92.5 1.0 C2C 0:CLA609 4.3 90.9 1.0 C2D 0:CLA609 4.3 90.3 1.0 C3C 0:CLA609 4.4 89.9 1.0 C3A 0:CLA609 4.4 96.8 1.0 C2A 0:CLA609 4.5 92.1 1.0 CE 0:LYS194 4.5 83.4 1.0 CMD 0:KC2610 4.8 88.4 1.0 CBD 0:CLA609 4.9 85.9 1.0

Magnesium binding site 10 out of 75 in the Structure of Acpii-Ccpii From Cryptophyte Algae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Structure of Acpii-Ccpii From Cryptophyte Algae within 5.0Å range: probe atom residue distance (Å) B Occ 0:Mg610 b:87.3 occ:1.00 MG 0:KC2610 0.0 87.3 1.0 ND 0:KC2610 2.0 84.4 1.0 NB 0:KC2610 2.0 84.3 1.0 NC 0:KC2610 2.1 98.2 1.0 NA 0:KC2610 2.1 82.1 1.0 OD1 0:ASN195 2.6 83.8 1.0 C4D 0:KC2610 2.9 83.7 1.0 C1B 0:KC2610 3.0 88.2 1.0 C4B 0:KC2610 3.0 85.0 1.0 C1D 0:KC2610 3.0 85.0 1.0 C4C 0:KC2610 3.1 88.2 1.0 C4A 0:KC2610 3.1 85.4 1.0 C1C 0:KC2610 3.1 95.1 1.0 C1A 0:KC2610 3.1 84.2 1.0 CHB 0:KC2610 3.4 86.4 1.0 CHA 0:KC2610 3.5 86.9 1.0 CHC 0:KC2610 3.5 87.7 1.0 CHD 0:KC2610 3.5 84.0 1.0 CG 0:ASN195 3.7 83.8 1.0 ND2 0:ASN195 4.1 88.5 1.0 C3D 0:KC2610 4.1 88.5 1.0 C2D 0:KC2610 4.2 85.6 1.0 C2B 0:KC2610 4.2 91.7 1.0 C3B 0:KC2610 4.2 88.8 1.0 C2C 0:KC2610 4.3 86.7 1.0 C3A 0:KC2610 4.3 90.5 1.0 C3C 0:KC2610 4.3 85.9 1.0 C2A 0:KC2610 4.4 88.4 1.0 CBD 0:KC2610 4.9 95.6 1.0 CB 0:ASN195 4.9 77.5 1.0

Z.Mao, X.Li, Z.Li, L.Shen, X.Li, Y.Yang, W.Wang, T.Kuang, J.R.Shen, G.Han. Structure and Distinct Supramolecular Organization of A Psii-Acpii Dimer From A Cryptophyte Alga Chroomonas Placoidea. Nat Commun V. 15 4535 2024.
ISSN: ESSN 2041-1723
PubMed: 38806516
DOI: 10.1038/S41467-024-48878-X