Magnesium in PDB 8xls: Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335
Enzymatic activity of Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335
All present enzymatic activity of Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335:
1.97.1.12;
Other elements in 8xls:
The structure of Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335 also contains other interesting chemical elements:
Magnesium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
30;
Page 4, Binding sites: 31 -
40;
Page 5, Binding sites: 41 -
50;
Page 6, Binding sites: 51 -
60;
Page 7, Binding sites: 61 -
70;
Page 8, Binding sites: 71 -
80;
Page 9, Binding sites: 81 -
90;
Page 10, Binding sites: 91 -
100;
Page 11, Binding sites: 101 -
110;
Page 12, Binding sites: 111 -
120;
Page 13, Binding sites: 121 -
130;
Page 14, Binding sites: 131 -
140;
Page 15, Binding sites: 141 -
146;
Binding sites:
The binding sites of Magnesium atom in the Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335
(pdb code 8xls). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 146 binding sites of Magnesium where determined in the
Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335, PDB code: 8xls:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 146 in 8xls
Go back to
Magnesium Binding Sites List in 8xls
Magnesium binding site 1 out
of 146 in the Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg801
b:20.2
occ:1.00
|
MG
|
A:CL0801
|
0.0
|
20.2
|
1.0
|
ND
|
A:CL0801
|
2.0
|
19.6
|
1.0
|
NB
|
A:CL0801
|
2.0
|
19.9
|
1.0
|
NC
|
A:CL0801
|
2.1
|
19.6
|
1.0
|
NA
|
A:CL0801
|
2.1
|
21.0
|
1.0
|
NE2
|
A:HIS677
|
2.5
|
22.1
|
1.0
|
C4D
|
A:CL0801
|
3.0
|
20.1
|
1.0
|
C4B
|
A:CL0801
|
3.0
|
21.9
|
1.0
|
C4A
|
A:CL0801
|
3.0
|
20.6
|
1.0
|
C1C
|
A:CL0801
|
3.0
|
21.7
|
1.0
|
C1B
|
A:CL0801
|
3.0
|
20.6
|
1.0
|
C1A
|
A:CL0801
|
3.1
|
21.3
|
1.0
|
C4C
|
A:CL0801
|
3.1
|
19.3
|
1.0
|
C1D
|
A:CL0801
|
3.2
|
19.4
|
1.0
|
CHB
|
A:CL0801
|
3.4
|
20.9
|
1.0
|
CD2
|
A:HIS677
|
3.4
|
21.3
|
1.0
|
CHC
|
A:CL0801
|
3.4
|
20.0
|
1.0
|
CE1
|
A:HIS677
|
3.4
|
21.9
|
1.0
|
CHA
|
A:CL0801
|
3.5
|
24.7
|
1.0
|
CAB
|
B:CLA802
|
3.6
|
22.9
|
1.0
|
CHD
|
A:CL0801
|
3.7
|
20.6
|
1.0
|
C3B
|
B:CLA802
|
3.9
|
20.4
|
1.0
|
C4B
|
B:CLA802
|
4.2
|
19.3
|
1.0
|
CHC
|
B:CLA802
|
4.2
|
19.5
|
1.0
|
C3D
|
A:CL0801
|
4.3
|
21.2
|
1.0
|
C3B
|
A:CL0801
|
4.3
|
23.2
|
1.0
|
C2B
|
A:CL0801
|
4.4
|
19.3
|
1.0
|
C3A
|
A:CL0801
|
4.4
|
23.5
|
1.0
|
C2C
|
A:CL0801
|
4.4
|
23.4
|
1.0
|
C2A
|
A:CL0801
|
4.4
|
22.9
|
1.0
|
C3C
|
A:CL0801
|
4.4
|
25.5
|
1.0
|
C2D
|
A:CL0801
|
4.5
|
24.0
|
1.0
|
ND1
|
A:HIS677
|
4.5
|
23.1
|
1.0
|
CG
|
A:HIS677
|
4.6
|
23.8
|
1.0
|
C2B
|
B:CLA802
|
4.7
|
19.6
|
1.0
|
CBB
|
B:CLA802
|
4.8
|
25.5
|
1.0
|
CMA
|
A:CL0801
|
4.9
|
19.2
|
1.0
|
CBD
|
A:CL0801
|
4.9
|
25.9
|
1.0
|
CED
|
A:CLA878
|
5.0
|
36.3
|
1.0
|
NB
|
B:CLA802
|
5.0
|
19.3
|
1.0
|
|
Magnesium binding site 2 out
of 146 in 8xls
Go back to
Magnesium Binding Sites List in 8xls
Magnesium binding site 2 out
of 146 in the Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg802
b:25.2
occ:1.00
|
MG
|
A:CLA802
|
0.0
|
25.2
|
1.0
|
ND
|
A:CLA802
|
2.0
|
22.2
|
1.0
|
NB
|
A:CLA802
|
2.0
|
26.3
|
1.0
|
NC
|
A:CLA802
|
2.1
|
24.3
|
1.0
|
NA
|
A:CLA802
|
2.1
|
23.2
|
1.0
|
O
|
A:HOH1020
|
2.2
|
30.0
|
1.0
|
C4D
|
A:CLA802
|
3.0
|
22.3
|
1.0
|
C1C
|
A:CLA802
|
3.0
|
23.5
|
1.0
|
C4B
|
A:CLA802
|
3.0
|
27.1
|
1.0
|
C1B
|
A:CLA802
|
3.0
|
26.5
|
1.0
|
C4A
|
A:CLA802
|
3.0
|
21.5
|
1.0
|
C1A
|
A:CLA802
|
3.1
|
23.7
|
1.0
|
C4C
|
A:CLA802
|
3.1
|
23.4
|
1.0
|
CBB
|
B:CLA803
|
3.2
|
30.1
|
1.0
|
C1D
|
A:CLA802
|
3.2
|
23.3
|
1.0
|
CHB
|
A:CLA802
|
3.4
|
22.8
|
1.0
|
CHC
|
A:CLA802
|
3.4
|
23.6
|
1.0
|
CHA
|
A:CLA802
|
3.4
|
23.1
|
1.0
|
CHD
|
A:CLA802
|
3.7
|
23.6
|
1.0
|
CAB
|
B:CLA803
|
4.1
|
29.4
|
1.0
|
C3D
|
A:CLA802
|
4.3
|
24.9
|
1.0
|
C3B
|
A:CLA802
|
4.3
|
29.1
|
1.0
|
C2C
|
A:CLA802
|
4.3
|
24.2
|
1.0
|
C2B
|
A:CLA802
|
4.4
|
29.6
|
1.0
|
OD1
|
A:ASN601
|
4.4
|
39.0
|
1.0
|
C3A
|
A:CLA802
|
4.4
|
23.0
|
1.0
|
C3C
|
A:CLA802
|
4.4
|
22.4
|
1.0
|
C2A
|
A:CLA802
|
4.4
|
25.4
|
1.0
|
C2D
|
A:CLA802
|
4.5
|
26.2
|
1.0
|
CB
|
B:ALA657
|
4.5
|
24.3
|
1.0
|
C20
|
A:CL0801
|
4.7
|
43.2
|
1.0
|
C2
|
A:CL0801
|
4.7
|
32.5
|
1.0
|
ND2
|
A:ASN601
|
4.7
|
33.8
|
1.0
|
C3B
|
B:CLA803
|
4.9
|
26.3
|
1.0
|
CBD
|
A:CLA802
|
4.9
|
26.1
|
1.0
|
CG
|
A:ASN601
|
4.9
|
33.5
|
1.0
|
C3
|
A:CL0801
|
4.9
|
37.3
|
1.0
|
|
Magnesium binding site 3 out
of 146 in 8xls
Go back to
Magnesium Binding Sites List in 8xls
Magnesium binding site 3 out
of 146 in the Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg803
b:24.9
occ:1.00
|
MG
|
A:CLA803
|
0.0
|
24.9
|
1.0
|
ND
|
A:CLA803
|
2.0
|
21.5
|
1.0
|
NB
|
A:CLA803
|
2.0
|
23.9
|
1.0
|
NC
|
A:CLA803
|
2.1
|
23.9
|
1.0
|
NA
|
A:CLA803
|
2.1
|
25.3
|
1.0
|
SD
|
A:MET685
|
2.5
|
25.3
|
1.0
|
C4D
|
A:CLA803
|
3.0
|
23.0
|
1.0
|
C1C
|
A:CLA803
|
3.0
|
23.9
|
1.0
|
C1B
|
A:CLA803
|
3.0
|
25.9
|
1.0
|
C4A
|
A:CLA803
|
3.0
|
27.0
|
1.0
|
C4B
|
A:CLA803
|
3.0
|
23.1
|
1.0
|
C1A
|
A:CLA803
|
3.1
|
25.0
|
1.0
|
C4C
|
A:CLA803
|
3.1
|
23.4
|
1.0
|
C1D
|
A:CLA803
|
3.2
|
21.9
|
1.0
|
CHB
|
A:CLA803
|
3.4
|
27.9
|
1.0
|
CHC
|
A:CLA803
|
3.4
|
21.0
|
1.0
|
CHA
|
A:CLA803
|
3.4
|
23.1
|
1.0
|
CG
|
A:MET685
|
3.6
|
25.2
|
1.0
|
CE
|
A:MET685
|
3.6
|
26.8
|
1.0
|
CHD
|
A:CLA803
|
3.7
|
21.9
|
1.0
|
NE1
|
B:TRP581
|
3.7
|
20.6
|
1.0
|
CB
|
A:MET685
|
4.0
|
26.4
|
1.0
|
CZ2
|
B:TRP581
|
4.2
|
26.4
|
1.0
|
C3D
|
A:CLA803
|
4.2
|
23.9
|
1.0
|
C3B
|
A:CLA803
|
4.3
|
28.5
|
1.0
|
C2B
|
A:CLA803
|
4.3
|
28.1
|
1.0
|
CE2
|
B:TRP581
|
4.4
|
23.7
|
1.0
|
C2C
|
A:CLA803
|
4.4
|
24.9
|
1.0
|
C3A
|
A:CLA803
|
4.4
|
27.4
|
1.0
|
C2A
|
A:CLA803
|
4.4
|
25.6
|
1.0
|
C3C
|
A:CLA803
|
4.4
|
24.5
|
1.0
|
C2D
|
A:CLA803
|
4.5
|
23.1
|
1.0
|
CD1
|
B:TRP581
|
4.9
|
20.7
|
1.0
|
CBD
|
A:CLA803
|
4.9
|
27.1
|
1.0
|
CH2
|
A:TRP694
|
4.9
|
30.3
|
1.0
|
|
Magnesium binding site 4 out
of 146 in 8xls
Go back to
Magnesium Binding Sites List in 8xls
Magnesium binding site 4 out
of 146 in the Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg804
b:33.8
occ:1.00
|
MG
|
A:CLA804
|
0.0
|
33.8
|
1.0
|
ND
|
A:CLA804
|
2.0
|
34.3
|
1.0
|
NB
|
A:CLA804
|
2.0
|
36.2
|
1.0
|
NC
|
A:CLA804
|
2.1
|
34.5
|
1.0
|
NA
|
A:CLA804
|
2.1
|
35.7
|
1.0
|
NE2
|
A:HIS53
|
2.3
|
40.6
|
1.0
|
C4D
|
A:CLA804
|
3.0
|
33.1
|
1.0
|
C1C
|
A:CLA804
|
3.0
|
35.9
|
1.0
|
C1B
|
A:CLA804
|
3.0
|
37.9
|
1.0
|
C4A
|
A:CLA804
|
3.0
|
38.9
|
1.0
|
C4B
|
A:CLA804
|
3.0
|
38.4
|
1.0
|
C1A
|
A:CLA804
|
3.1
|
36.4
|
1.0
|
C4C
|
A:CLA804
|
3.1
|
35.3
|
1.0
|
CE1
|
A:HIS53
|
3.2
|
37.3
|
1.0
|
C1D
|
A:CLA804
|
3.3
|
33.2
|
1.0
|
CD2
|
A:HIS53
|
3.3
|
34.1
|
1.0
|
CHB
|
A:CLA804
|
3.4
|
39.8
|
1.0
|
CHC
|
A:CLA804
|
3.4
|
37.8
|
1.0
|
CHA
|
A:CLA804
|
3.5
|
34.3
|
1.0
|
CHD
|
A:CLA804
|
3.7
|
34.0
|
1.0
|
CB
|
J:PRO12
|
3.7
|
43.6
|
1.0
|
CG
|
J:PRO12
|
3.8
|
41.7
|
1.0
|
C3D
|
A:CLA804
|
4.3
|
32.3
|
1.0
|
C2B
|
A:CLA804
|
4.3
|
45.8
|
1.0
|
C3B
|
A:CLA804
|
4.3
|
44.4
|
1.0
|
ND1
|
A:HIS53
|
4.4
|
38.0
|
1.0
|
C2C
|
A:CLA804
|
4.4
|
38.5
|
1.0
|
C3A
|
A:CLA804
|
4.4
|
43.5
|
1.0
|
C2A
|
A:CLA804
|
4.4
|
45.3
|
1.0
|
CG
|
A:HIS53
|
4.4
|
39.8
|
1.0
|
C3C
|
A:CLA804
|
4.4
|
41.7
|
1.0
|
C2D
|
A:CLA804
|
4.5
|
34.7
|
1.0
|
CD
|
J:PRO12
|
4.7
|
40.4
|
1.0
|
CBD
|
A:CLA804
|
4.9
|
40.8
|
1.0
|
|
Magnesium binding site 5 out
of 146 in 8xls
Go back to
Magnesium Binding Sites List in 8xls
Magnesium binding site 5 out
of 146 in the Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg805
b:30.4
occ:1.00
|
MG
|
A:CLA805
|
0.0
|
30.4
|
1.0
|
ND
|
A:CLA805
|
2.0
|
26.5
|
1.0
|
NB
|
A:CLA805
|
2.0
|
28.4
|
1.0
|
NC
|
A:CLA805
|
2.1
|
27.9
|
1.0
|
NA
|
A:CLA805
|
2.1
|
31.3
|
1.0
|
NE2
|
A:HIS57
|
2.2
|
36.1
|
1.0
|
CE1
|
A:HIS57
|
3.0
|
40.4
|
1.0
|
C4D
|
A:CLA805
|
3.0
|
26.9
|
1.0
|
C1C
|
A:CLA805
|
3.0
|
29.1
|
1.0
|
C4B
|
A:CLA805
|
3.0
|
29.9
|
1.0
|
C4A
|
A:CLA805
|
3.0
|
34.3
|
1.0
|
C1B
|
A:CLA805
|
3.0
|
28.5
|
1.0
|
C1A
|
A:CLA805
|
3.1
|
33.6
|
1.0
|
C4C
|
A:CLA805
|
3.1
|
28.0
|
1.0
|
C1D
|
A:CLA805
|
3.3
|
26.6
|
1.0
|
CD2
|
A:HIS57
|
3.4
|
34.5
|
1.0
|
CHB
|
A:CLA805
|
3.4
|
32.9
|
1.0
|
CHC
|
A:CLA805
|
3.4
|
28.9
|
1.0
|
CHA
|
A:CLA805
|
3.5
|
32.1
|
1.0
|
CHD
|
A:CLA805
|
3.7
|
26.3
|
1.0
|
C7
|
A:CLA812
|
3.8
|
60.4
|
1.0
|
ND1
|
A:HIS57
|
4.2
|
38.5
|
1.0
|
C3D
|
A:CLA805
|
4.3
|
29.7
|
1.0
|
C9
|
A:CLA812
|
4.3
|
73.5
|
1.0
|
C3B
|
A:CLA805
|
4.3
|
32.4
|
1.0
|
C2C
|
A:CLA805
|
4.4
|
30.1
|
1.0
|
C2B
|
A:CLA805
|
4.4
|
30.0
|
1.0
|
CG
|
A:HIS57
|
4.4
|
38.3
|
1.0
|
C3A
|
A:CLA805
|
4.4
|
35.6
|
1.0
|
C2A
|
A:CLA805
|
4.4
|
41.0
|
1.0
|
C3C
|
A:CLA805
|
4.4
|
30.6
|
1.0
|
C2D
|
A:CLA805
|
4.5
|
28.0
|
1.0
|
C6
|
A:CLA812
|
4.7
|
64.1
|
1.0
|
C8
|
A:CLA812
|
4.7
|
71.1
|
1.0
|
CBD
|
A:CLA805
|
4.9
|
34.3
|
1.0
|
CBB
|
A:CLA806
|
4.9
|
39.7
|
1.0
|
|
Magnesium binding site 6 out
of 146 in 8xls
Go back to
Magnesium Binding Sites List in 8xls
Magnesium binding site 6 out
of 146 in the Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg806
b:27.1
occ:1.00
|
MG
|
A:CLA806
|
0.0
|
27.1
|
1.0
|
ND
|
A:CLA806
|
2.0
|
26.3
|
1.0
|
NB
|
A:CLA806
|
2.0
|
24.8
|
1.0
|
NC
|
A:CLA806
|
2.1
|
26.3
|
1.0
|
NA
|
A:CLA806
|
2.1
|
27.0
|
1.0
|
NE2
|
A:HIS77
|
2.3
|
20.9
|
1.0
|
C4D
|
A:CLA806
|
3.0
|
25.4
|
1.0
|
CD2
|
A:HIS77
|
3.0
|
22.5
|
1.0
|
C1C
|
A:CLA806
|
3.0
|
28.2
|
1.0
|
C4B
|
A:CLA806
|
3.0
|
25.6
|
1.0
|
C4A
|
A:CLA806
|
3.0
|
24.2
|
1.0
|
C1A
|
A:CLA806
|
3.0
|
27.1
|
1.0
|
C1B
|
A:CLA806
|
3.1
|
23.5
|
1.0
|
C4C
|
A:CLA806
|
3.1
|
25.5
|
1.0
|
C1D
|
A:CLA806
|
3.3
|
23.8
|
1.0
|
CMB
|
A:CLA831
|
3.3
|
29.4
|
1.0
|
CHC
|
A:CLA806
|
3.4
|
27.0
|
1.0
|
CHB
|
A:CLA806
|
3.4
|
23.8
|
1.0
|
CE1
|
A:HIS77
|
3.4
|
26.1
|
1.0
|
CHA
|
A:CLA806
|
3.4
|
24.4
|
1.0
|
CHD
|
A:CLA806
|
3.7
|
22.6
|
1.0
|
CG
|
A:HIS77
|
4.2
|
25.7
|
1.0
|
C3D
|
A:CLA806
|
4.3
|
25.2
|
1.0
|
C3B
|
A:CLA806
|
4.3
|
30.5
|
1.0
|
C2C
|
A:CLA806
|
4.4
|
31.1
|
1.0
|
C2B
|
A:CLA806
|
4.4
|
28.9
|
1.0
|
ND1
|
A:HIS77
|
4.4
|
22.8
|
1.0
|
C2A
|
A:CLA806
|
4.4
|
28.5
|
1.0
|
C3A
|
A:CLA806
|
4.4
|
26.5
|
1.0
|
C3C
|
A:CLA806
|
4.4
|
26.6
|
1.0
|
CG2
|
A:ILE73
|
4.5
|
32.1
|
1.0
|
C2D
|
A:CLA806
|
4.5
|
25.8
|
1.0
|
C2B
|
A:CLA831
|
4.7
|
26.7
|
1.0
|
CBB
|
A:CLA831
|
4.8
|
25.2
|
1.0
|
CBD
|
A:CLA806
|
4.9
|
24.5
|
1.0
|
|
Magnesium binding site 7 out
of 146 in 8xls
Go back to
Magnesium Binding Sites List in 8xls
Magnesium binding site 7 out
of 146 in the Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg807
b:26.0
occ:1.00
|
MG
|
A:CLA807
|
0.0
|
26.0
|
1.0
|
ND
|
A:CLA807
|
2.0
|
28.1
|
1.0
|
NB
|
A:CLA807
|
2.0
|
24.6
|
1.0
|
NC
|
A:CLA807
|
2.1
|
27.6
|
1.0
|
NA
|
A:CLA807
|
2.1
|
28.0
|
1.0
|
OE1
|
A:GLN80
|
2.2
|
30.8
|
1.0
|
C4D
|
A:CLA807
|
3.0
|
31.0
|
1.0
|
C1C
|
A:CLA807
|
3.0
|
25.2
|
1.0
|
C4A
|
A:CLA807
|
3.0
|
29.3
|
1.0
|
C4B
|
A:CLA807
|
3.0
|
25.4
|
1.0
|
C1B
|
A:CLA807
|
3.0
|
25.6
|
1.0
|
C1A
|
A:CLA807
|
3.1
|
33.6
|
1.0
|
C4C
|
A:CLA807
|
3.1
|
27.8
|
1.0
|
CD
|
A:GLN80
|
3.2
|
29.3
|
1.0
|
C1D
|
A:CLA807
|
3.3
|
26.9
|
1.0
|
CHB
|
A:CLA807
|
3.4
|
26.0
|
1.0
|
CHC
|
A:CLA807
|
3.4
|
23.7
|
1.0
|
CHA
|
A:CLA807
|
3.5
|
35.8
|
1.0
|
C17
|
A:CLA807
|
3.5
|
40.7
|
1.0
|
C16
|
A:CLA807
|
3.5
|
34.6
|
1.0
|
NE2
|
A:GLN80
|
3.6
|
29.6
|
1.0
|
CHD
|
A:CLA807
|
3.7
|
29.1
|
1.0
|
C3D
|
A:CLA807
|
4.3
|
32.9
|
1.0
|
C3B
|
A:CLA807
|
4.4
|
27.1
|
1.0
|
C2C
|
A:CLA807
|
4.4
|
25.7
|
1.0
|
C2B
|
A:CLA807
|
4.4
|
27.5
|
1.0
|
C3A
|
A:CLA807
|
4.4
|
35.1
|
1.0
|
C2A
|
A:CLA807
|
4.4
|
37.9
|
1.0
|
C3C
|
A:CLA807
|
4.4
|
28.1
|
1.0
|
C2D
|
A:CLA807
|
4.5
|
33.9
|
1.0
|
CMA
|
A:CLA806
|
4.5
|
25.4
|
1.0
|
CG
|
A:GLN80
|
4.6
|
28.6
|
1.0
|
C18
|
A:CLA807
|
4.7
|
47.4
|
1.0
|
CBD
|
A:CLA807
|
4.9
|
37.3
|
1.0
|
C15
|
A:CLA807
|
4.9
|
39.3
|
1.0
|
|
Magnesium binding site 8 out
of 146 in 8xls
Go back to
Magnesium Binding Sites List in 8xls
Magnesium binding site 8 out
of 146 in the Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg808
b:34.1
occ:1.00
|
MG
|
A:CLA808
|
0.0
|
34.1
|
1.0
|
ND
|
A:CLA808
|
2.0
|
36.2
|
1.0
|
NB
|
A:CLA808
|
2.0
|
37.6
|
1.0
|
NC
|
A:CLA808
|
2.1
|
37.4
|
1.0
|
NA
|
A:CLA808
|
2.1
|
36.0
|
1.0
|
NE2
|
A:HIS94
|
2.4
|
36.4
|
1.0
|
C4D
|
A:CLA808
|
3.0
|
33.5
|
1.0
|
C1C
|
A:CLA808
|
3.0
|
37.7
|
1.0
|
C4A
|
A:CLA808
|
3.0
|
35.1
|
1.0
|
C4B
|
A:CLA808
|
3.0
|
34.0
|
1.0
|
C1B
|
A:CLA808
|
3.0
|
32.3
|
1.0
|
C1A
|
A:CLA808
|
3.1
|
33.9
|
1.0
|
C4C
|
A:CLA808
|
3.1
|
37.5
|
1.0
|
CE1
|
A:HIS94
|
3.2
|
40.0
|
1.0
|
C1D
|
A:CLA808
|
3.3
|
37.7
|
1.0
|
CHB
|
A:CLA808
|
3.4
|
31.6
|
1.0
|
CHC
|
A:CLA808
|
3.4
|
37.1
|
1.0
|
CD2
|
A:HIS94
|
3.4
|
35.8
|
1.0
|
CHA
|
A:CLA808
|
3.5
|
35.2
|
1.0
|
CHD
|
A:CLA808
|
3.7
|
39.1
|
1.0
|
C9
|
A:LMT854
|
3.8
|
75.0
|
1.0
|
C7
|
A:LMT854
|
4.1
|
67.2
|
1.0
|
C8
|
A:LMT854
|
4.2
|
71.3
|
1.0
|
C3D
|
A:CLA808
|
4.3
|
33.7
|
1.0
|
C3B
|
A:CLA808
|
4.3
|
43.0
|
1.0
|
C2C
|
A:CLA808
|
4.4
|
40.5
|
1.0
|
C2B
|
A:CLA808
|
4.4
|
39.4
|
1.0
|
ND1
|
A:HIS94
|
4.4
|
39.2
|
1.0
|
C3A
|
A:CLA808
|
4.4
|
34.1
|
1.0
|
C2A
|
A:CLA808
|
4.4
|
33.8
|
1.0
|
C3C
|
A:CLA808
|
4.4
|
39.5
|
1.0
|
C2D
|
A:CLA808
|
4.5
|
38.9
|
1.0
|
CG
|
A:HIS94
|
4.5
|
38.6
|
1.0
|
CBD
|
A:CLA808
|
4.9
|
38.4
|
1.0
|
|
Magnesium binding site 9 out
of 146 in 8xls
Go back to
Magnesium Binding Sites List in 8xls
Magnesium binding site 9 out
of 146 in the Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg809
b:31.3
occ:1.00
|
MG
|
A:CLA809
|
0.0
|
31.3
|
1.0
|
ND
|
A:CLA809
|
2.0
|
30.4
|
1.0
|
NB
|
A:CLA809
|
2.0
|
28.5
|
1.0
|
NC
|
A:CLA809
|
2.1
|
31.0
|
1.0
|
NA
|
A:CLA809
|
2.1
|
33.9
|
1.0
|
OE1
|
A:GLN116
|
2.2
|
30.1
|
1.0
|
C4D
|
A:CLA809
|
3.0
|
31.4
|
1.0
|
C4B
|
A:CLA809
|
3.0
|
30.0
|
1.0
|
C1C
|
A:CLA809
|
3.0
|
32.8
|
1.0
|
C4A
|
A:CLA809
|
3.0
|
29.8
|
1.0
|
C1B
|
A:CLA809
|
3.0
|
29.1
|
1.0
|
C1A
|
A:CLA809
|
3.1
|
33.7
|
1.0
|
CD
|
A:GLN116
|
3.1
|
31.6
|
1.0
|
C4C
|
A:CLA809
|
3.1
|
27.9
|
1.0
|
C1D
|
A:CLA809
|
3.3
|
30.6
|
1.0
|
CHB
|
A:CLA809
|
3.4
|
29.4
|
1.0
|
CHC
|
A:CLA809
|
3.4
|
34.0
|
1.0
|
NE2
|
A:GLN116
|
3.4
|
32.8
|
1.0
|
CHA
|
A:CLA809
|
3.5
|
28.9
|
1.0
|
CHD
|
A:CLA809
|
3.7
|
26.9
|
1.0
|
C4
|
A:CLA829
|
4.0
|
58.4
|
1.0
|
C5
|
A:CLA829
|
4.0
|
69.4
|
1.0
|
C3D
|
A:CLA809
|
4.3
|
29.8
|
1.0
|
C3
|
A:CLA829
|
4.3
|
70.8
|
1.0
|
C3B
|
A:CLA809
|
4.3
|
31.4
|
1.0
|
C2B
|
A:CLA809
|
4.3
|
31.1
|
1.0
|
C2C
|
A:CLA809
|
4.4
|
31.9
|
1.0
|
C3A
|
A:CLA809
|
4.4
|
35.3
|
1.0
|
C2A
|
A:CLA809
|
4.4
|
36.4
|
1.0
|
C3C
|
A:CLA809
|
4.4
|
30.2
|
1.0
|
C2D
|
A:CLA809
|
4.5
|
31.0
|
1.0
|
O1A
|
A:CLA829
|
4.5
|
72.3
|
1.0
|
CG
|
A:GLN116
|
4.5
|
31.5
|
1.0
|
C6
|
A:CLA829
|
4.9
|
74.9
|
1.0
|
CBD
|
A:CLA809
|
4.9
|
31.0
|
1.0
|
CBA
|
A:CLA809
|
4.9
|
53.4
|
1.0
|
CB
|
A:GLN116
|
4.9
|
32.4
|
1.0
|
|
Magnesium binding site 10 out
of 146 in 8xls
Go back to
Magnesium Binding Sites List in 8xls
Magnesium binding site 10 out
of 146 in the Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Psi-Fcpi of the Diatom Thalassiosira Pseudonana CCMP1335 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg810
b:27.8
occ:1.00
|
MG
|
A:CLA810
|
0.0
|
27.8
|
1.0
|
ND
|
A:CLA810
|
2.0
|
26.0
|
1.0
|
NB
|
A:CLA810
|
2.0
|
28.3
|
1.0
|
NC
|
A:CLA810
|
2.1
|
27.9
|
1.0
|
NA
|
A:CLA810
|
2.1
|
32.8
|
1.0
|
OE1
|
A:GLN124
|
2.2
|
30.8
|
1.0
|
C4D
|
A:CLA810
|
3.0
|
27.9
|
1.0
|
C1C
|
A:CLA810
|
3.0
|
28.8
|
1.0
|
C4B
|
A:CLA810
|
3.0
|
30.5
|
1.0
|
C1B
|
A:CLA810
|
3.0
|
30.0
|
1.0
|
C4A
|
A:CLA810
|
3.0
|
34.7
|
1.0
|
C1A
|
A:CLA810
|
3.1
|
33.9
|
1.0
|
C4C
|
A:CLA810
|
3.1
|
25.9
|
1.0
|
C1D
|
A:CLA810
|
3.2
|
25.1
|
1.0
|
CD
|
A:GLN124
|
3.3
|
30.3
|
1.0
|
CHB
|
A:CLA810
|
3.4
|
30.9
|
1.0
|
CHC
|
A:CLA810
|
3.4
|
28.4
|
1.0
|
CHA
|
A:CLA810
|
3.5
|
29.8
|
1.0
|
CHD
|
A:CLA810
|
3.7
|
27.7
|
1.0
|
NE2
|
A:GLN124
|
3.8
|
31.0
|
1.0
|
C27
|
B:UNL801
|
4.0
|
69.4
|
1.0
|
C26
|
B:UNL801
|
4.0
|
64.3
|
1.0
|
C3D
|
A:CLA810
|
4.3
|
26.9
|
1.0
|
C3B
|
A:CLA810
|
4.3
|
31.2
|
1.0
|
C2B
|
A:CLA810
|
4.3
|
32.0
|
1.0
|
C2C
|
A:CLA810
|
4.4
|
30.7
|
1.0
|
C3A
|
A:CLA810
|
4.4
|
38.4
|
1.0
|
C3C
|
A:CLA810
|
4.4
|
28.9
|
1.0
|
C2A
|
A:CLA810
|
4.4
|
36.4
|
1.0
|
C2D
|
A:CLA810
|
4.5
|
28.3
|
1.0
|
CG
|
A:GLN124
|
4.6
|
27.4
|
1.0
|
CB
|
A:GLN124
|
4.7
|
33.5
|
1.0
|
CBD
|
A:CLA810
|
4.9
|
31.9
|
1.0
|
C28
|
B:UNL801
|
4.9
|
61.5
|
1.0
|
|
Reference:
K.Kato,
Y.Nakajima,
J.Xing,
M.Kumazawa,
H.Ogawa,
J.R.Shen,
K.Ifuku,
R.Nagao.
Structural Basis For Molecular Assembly of Fucoxanthin Chlorophyll A/C-Binding Proteins in A Diatom Photosystem I Supercomplex Elife 2024.
ISSN: ESSN 2050-084X
DOI: 10.7554/ELIFE.99858.2
Page generated: Wed Nov 13 12:31:11 2024
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