Magnesium in PDB 8yk9: Structure of Saccharolobus Solfataricus Segc (SSO0033) Protein, Atp Soak

The structure of Structure of Saccharolobus Solfataricus Segc (SSO0033) Protein, Atp Soak, PDB code: 8yk9 was solved by C.Y.Yen, M.G.Lin, Y.J.Sun, C.D.Hsiao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.67 / 3.40
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	159.233, 159.233, 127.871, 90, 90, 90
R / Rfree (%)	19.7 / 22.9

The binding sites of Magnesium atom in the Structure of Saccharolobus Solfataricus Segc (SSO0033) Protein, Atp Soak (pdb code 8yk9). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Saccharolobus Solfataricus Segc (SSO0033) Protein, Atp Soak, PDB code: 8yk9:

Magnesium binding site 1 out of 1 in the Structure of Saccharolobus Solfataricus Segc (SSO0033) Protein, Atp Soak


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Saccharolobus Solfataricus Segc (SSO0033) Protein, Atp Soak within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg202 b:95.0 occ:1.00 O2B C:ADP201 2.5 140.0 1.0 OD1 B:ASP25 2.7 110.7 1.0 NE B:ARG22 3.5 93.4 1.0 NH2 B:ARG22 3.5 102.2 1.0 CG B:ASP25 3.7 100.2 1.0 NZ B:LYS16 3.7 73.2 1.0 OD2 B:ASP25 3.9 107.6 1.0 CZ B:ARG22 4.0 96.9 1.0 PB C:ADP201 4.0 156.9 1.0 NZ B:LYS46 4.3 113.5 1.0 O3A C:ADP201 4.4 156.2 1.0 CD B:ARG22 4.6 77.5 1.0 O1B C:ADP201 4.8 153.3 1.0 CE B:LYS16 4.9 78.7 1.0

M.G.Lin, C.Y.Yen, Y.Y.Shen, Y.S.Huang, I.W.Ng, D.Barilla, Y.J.Sun, C.D.Hsiao. Unraveling the Structure and Function of A Novel Segc Protein Interacting with the Segab Chromosome Segregation Complex in Archaea. Nucleic Acids Res. 2024.
ISSN: ESSN 1362-4962
PubMed: 39077943
DOI: 10.1093/NAR/GKAE660