Magnesium in PDB 8z82: Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila
Other elements in 8z82:
The structure of Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila also contains other interesting chemical elements:
Magnesium Binding Sites:
Magnesium binding site 1 out
of 46 in 8z82
Go back to
Magnesium Binding Sites List in 8z82
Magnesium binding site 1 out
of 46 in the Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg405
b:31.2
occ:1.00
|
O
|
C:HOH504
|
1.8
|
28.9
|
1.0
|
O
|
C:HOH503
|
2.0
|
24.4
|
1.0
|
O
|
C:HOH501
|
2.1
|
20.4
|
1.0
|
OE1
|
C:GLU235
|
2.2
|
39.3
|
1.0
|
O
|
M:HOH501
|
2.3
|
37.1
|
1.0
|
OE1
|
C:GLN186
|
2.3
|
34.9
|
1.0
|
CD
|
C:GLU235
|
2.9
|
37.9
|
1.0
|
OE2
|
C:GLU235
|
3.0
|
36.6
|
1.0
|
CD
|
C:GLN186
|
3.5
|
32.6
|
1.0
|
O
|
C:HOH502
|
3.9
|
25.3
|
1.0
|
O
|
M:PRO181
|
4.0
|
19.1
|
1.0
|
CB
|
M:ASP184
|
4.1
|
12.4
|
1.0
|
NE2
|
C:GLN186
|
4.1
|
31.7
|
1.0
|
OD1
|
C:ASN187
|
4.2
|
26.9
|
1.0
|
OE2
|
M:GLU96
|
4.3
|
33.4
|
1.0
|
CG
|
M:PRO176
|
4.3
|
17.8
|
1.0
|
CB
|
M:PRO181
|
4.3
|
8.8
|
1.0
|
O
|
C:SER197
|
4.4
|
36.0
|
1.0
|
CG
|
C:GLU235
|
4.4
|
22.1
|
1.0
|
CA
|
M:PRO181
|
4.4
|
11.7
|
1.0
|
OE1
|
M:GLU96
|
4.5
|
35.5
|
1.0
|
C
|
M:PRO181
|
4.6
|
12.9
|
1.0
|
CG
|
C:GLN186
|
4.7
|
23.8
|
1.0
|
CB
|
C:GLN186
|
4.7
|
19.3
|
1.0
|
OD2
|
M:ASP184
|
4.7
|
28.2
|
1.0
|
CD
|
M:GLU96
|
4.8
|
32.9
|
1.0
|
N
|
M:TRP185
|
4.9
|
11.3
|
1.0
|
CB
|
C:GLU235
|
4.9
|
14.4
|
1.0
|
CG
|
M:ASP184
|
5.0
|
23.8
|
1.0
|
|
Magnesium binding site 2 out
of 46 in 8z82
Go back to
Magnesium Binding Sites List in 8z82
Magnesium binding site 2 out
of 46 in the Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
L:Mg302
b:18.1
occ:1.00
|
MG
|
L:BCL302
|
0.0
|
18.1
|
1.0
|
NC
|
L:BCL302
|
2.0
|
13.9
|
1.0
|
NA
|
L:BCL302
|
2.0
|
23.2
|
1.0
|
ND
|
L:BCL302
|
2.0
|
13.6
|
1.0
|
NB
|
L:BCL302
|
2.1
|
18.7
|
1.0
|
NE2
|
L:HIS173
|
2.4
|
9.8
|
1.0
|
C4D
|
L:BCL302
|
3.0
|
19.9
|
1.0
|
C4A
|
L:BCL302
|
3.0
|
12.0
|
1.0
|
C4C
|
L:BCL302
|
3.0
|
16.7
|
1.0
|
C1A
|
L:BCL302
|
3.0
|
18.3
|
1.0
|
C1C
|
L:BCL302
|
3.0
|
7.8
|
1.0
|
C1B
|
L:BCL302
|
3.1
|
15.8
|
1.0
|
C4B
|
L:BCL302
|
3.1
|
15.2
|
1.0
|
C1D
|
L:BCL302
|
3.2
|
10.6
|
1.0
|
CD2
|
L:HIS173
|
3.3
|
12.8
|
1.0
|
CHB
|
L:BCL302
|
3.4
|
13.5
|
1.0
|
CE1
|
L:HIS173
|
3.4
|
16.7
|
1.0
|
CHC
|
L:BCL302
|
3.4
|
13.7
|
1.0
|
CHA
|
L:BCL302
|
3.4
|
13.9
|
1.0
|
CHD
|
L:BCL302
|
3.5
|
7.6
|
1.0
|
OBB
|
M:BCL403
|
3.6
|
26.4
|
1.0
|
CAB
|
M:BCL403
|
3.6
|
10.4
|
1.0
|
CBB
|
M:BCL403
|
3.6
|
9.2
|
1.0
|
C3D
|
L:BCL302
|
4.2
|
22.0
|
1.0
|
C3A
|
L:BCL302
|
4.3
|
14.8
|
1.0
|
C2A
|
L:BCL302
|
4.3
|
13.8
|
1.0
|
C3C
|
L:BCL302
|
4.3
|
21.4
|
1.0
|
C2C
|
L:BCL302
|
4.3
|
12.3
|
1.0
|
C3B
|
M:BCL403
|
4.4
|
13.7
|
1.0
|
C3B
|
L:BCL302
|
4.4
|
9.1
|
1.0
|
C2B
|
L:BCL302
|
4.4
|
9.5
|
1.0
|
C2D
|
L:BCL302
|
4.4
|
16.5
|
1.0
|
CG
|
L:HIS173
|
4.5
|
16.6
|
1.0
|
ND1
|
L:HIS173
|
4.5
|
16.6
|
1.0
|
CD2
|
L:PHE167
|
4.5
|
6.9
|
1.0
|
CE2
|
L:PHE167
|
4.8
|
14.7
|
1.0
|
CBD
|
L:BCL302
|
4.9
|
20.7
|
1.0
|
CMA
|
L:BCL302
|
5.0
|
21.2
|
1.0
|
|
Magnesium binding site 3 out
of 46 in 8z82
Go back to
Magnesium Binding Sites List in 8z82
Magnesium binding site 3 out
of 46 in the Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
L:Mg308
b:24.1
occ:1.00
|
MG
|
L:BCL308
|
0.0
|
24.1
|
1.0
|
NA
|
L:BCL308
|
2.0
|
27.3
|
1.0
|
NC
|
L:BCL308
|
2.0
|
25.3
|
1.0
|
ND
|
L:BCL308
|
2.0
|
23.2
|
1.0
|
NB
|
L:BCL308
|
2.0
|
24.4
|
1.0
|
NE2
|
L:HIS153
|
2.6
|
9.1
|
1.0
|
C4D
|
L:BCL308
|
2.9
|
20.4
|
1.0
|
C4A
|
L:BCL308
|
3.0
|
25.0
|
1.0
|
C1A
|
L:BCL308
|
3.0
|
22.1
|
1.0
|
C4C
|
L:BCL308
|
3.0
|
22.7
|
1.0
|
C1C
|
L:BCL308
|
3.0
|
20.8
|
1.0
|
C1B
|
L:BCL308
|
3.1
|
20.4
|
1.0
|
C4B
|
L:BCL308
|
3.1
|
19.5
|
1.0
|
C1D
|
L:BCL308
|
3.2
|
20.4
|
1.0
|
CD2
|
L:HIS153
|
3.2
|
14.3
|
1.0
|
CHB
|
L:BCL308
|
3.4
|
17.4
|
1.0
|
CHC
|
L:BCL308
|
3.4
|
14.9
|
1.0
|
CHA
|
L:BCL308
|
3.4
|
18.5
|
1.0
|
CHD
|
L:BCL308
|
3.5
|
17.3
|
1.0
|
CE1
|
L:HIS153
|
3.7
|
21.2
|
1.0
|
OBB
|
L:BPH303
|
4.0
|
28.5
|
1.0
|
C3D
|
L:BCL308
|
4.2
|
20.6
|
1.0
|
C3A
|
L:BCL308
|
4.3
|
24.8
|
1.0
|
C2C
|
L:BCL308
|
4.3
|
23.0
|
1.0
|
C2A
|
L:BCL308
|
4.3
|
23.3
|
1.0
|
C3C
|
L:BCL308
|
4.3
|
23.4
|
1.0
|
C3B
|
L:BCL308
|
4.4
|
20.5
|
1.0
|
C2B
|
L:BCL308
|
4.4
|
21.2
|
1.0
|
C2D
|
L:BCL308
|
4.4
|
18.4
|
1.0
|
C20
|
L:BPH303
|
4.4
|
27.4
|
1.0
|
CG
|
L:HIS153
|
4.4
|
23.9
|
1.0
|
O1A
|
L:BCL308
|
4.5
|
38.4
|
1.0
|
ND1
|
L:HIS153
|
4.6
|
30.3
|
1.0
|
CBC
|
L:BCL308
|
4.7
|
21.6
|
1.0
|
CBD
|
L:BCL308
|
4.9
|
19.4
|
1.0
|
CMA
|
L:BCL308
|
5.0
|
25.9
|
1.0
|
CMC
|
L:BCL308
|
5.0
|
16.8
|
1.0
|
|
Magnesium binding site 4 out
of 46 in 8z82
Go back to
Magnesium Binding Sites List in 8z82
Magnesium binding site 4 out
of 46 in the Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
L:Mg309
b:22.4
occ:1.00
|
MG
|
L:BCL309
|
0.0
|
22.4
|
1.0
|
NA
|
L:BCL309
|
2.0
|
25.7
|
1.0
|
NC
|
L:BCL309
|
2.0
|
25.6
|
1.0
|
ND
|
L:BCL309
|
2.0
|
21.8
|
1.0
|
NB
|
L:BCL309
|
2.0
|
23.5
|
1.0
|
NE2
|
M:HIS182
|
2.5
|
11.6
|
1.0
|
C4D
|
L:BCL309
|
2.9
|
14.9
|
1.0
|
C4A
|
L:BCL309
|
3.0
|
18.9
|
1.0
|
C1A
|
L:BCL309
|
3.0
|
23.5
|
1.0
|
C4C
|
L:BCL309
|
3.0
|
18.1
|
1.0
|
C1C
|
L:BCL309
|
3.0
|
25.9
|
1.0
|
C1B
|
L:BCL309
|
3.0
|
18.7
|
1.0
|
C4B
|
L:BCL309
|
3.1
|
17.2
|
1.0
|
C1D
|
L:BCL309
|
3.2
|
15.8
|
1.0
|
CD2
|
M:HIS182
|
3.2
|
10.5
|
1.0
|
CHB
|
L:BCL309
|
3.3
|
21.4
|
1.0
|
CHC
|
L:BCL309
|
3.4
|
21.7
|
1.0
|
CHA
|
L:BCL309
|
3.4
|
17.5
|
1.0
|
CHD
|
L:BCL309
|
3.5
|
16.1
|
1.0
|
CE1
|
M:HIS182
|
3.6
|
18.0
|
1.0
|
C3D
|
L:BCL309
|
4.2
|
19.8
|
1.0
|
OBB
|
M:BPH404
|
4.3
|
35.0
|
1.0
|
C3C
|
L:BCL309
|
4.3
|
25.1
|
1.0
|
C3A
|
L:BCL309
|
4.3
|
22.5
|
1.0
|
C2A
|
L:BCL309
|
4.3
|
21.9
|
1.0
|
C2C
|
L:BCL309
|
4.3
|
25.0
|
1.0
|
C3B
|
L:BCL309
|
4.4
|
21.0
|
1.0
|
C2B
|
L:BCL309
|
4.4
|
19.0
|
1.0
|
C2D
|
L:BCL309
|
4.4
|
17.1
|
1.0
|
CG
|
M:HIS182
|
4.4
|
17.8
|
1.0
|
CBA
|
L:BCL309
|
4.5
|
24.5
|
1.0
|
ND1
|
M:HIS182
|
4.6
|
26.4
|
1.0
|
CE2
|
L:PHE181
|
4.8
|
15.8
|
1.0
|
CBD
|
L:BCL309
|
4.9
|
17.9
|
1.0
|
|
Magnesium binding site 5 out
of 46 in 8z82
Go back to
Magnesium Binding Sites List in 8z82
Magnesium binding site 5 out
of 46 in the Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
M:Mg403
b:24.7
occ:1.00
|
MG
|
M:BCL403
|
0.0
|
24.7
|
1.0
|
NC
|
M:BCL403
|
2.0
|
18.1
|
1.0
|
NA
|
M:BCL403
|
2.0
|
24.0
|
1.0
|
ND
|
M:BCL403
|
2.0
|
14.9
|
1.0
|
NB
|
M:BCL403
|
2.0
|
14.7
|
1.0
|
NE2
|
M:HIS202
|
2.3
|
14.7
|
1.0
|
C4D
|
M:BCL403
|
2.9
|
16.6
|
1.0
|
C4A
|
M:BCL403
|
3.0
|
15.0
|
1.0
|
C1A
|
M:BCL403
|
3.0
|
17.4
|
1.0
|
C4C
|
M:BCL403
|
3.0
|
10.0
|
1.0
|
C1C
|
M:BCL403
|
3.0
|
12.3
|
1.0
|
CE1
|
M:HIS202
|
3.0
|
6.7
|
1.0
|
C1B
|
M:BCL403
|
3.0
|
9.5
|
1.0
|
C4B
|
M:BCL403
|
3.1
|
6.9
|
1.0
|
CBB
|
L:BCL302
|
3.1
|
4.3
|
1.0
|
C1D
|
M:BCL403
|
3.2
|
14.6
|
1.0
|
CHB
|
M:BCL403
|
3.3
|
11.0
|
1.0
|
CHC
|
M:BCL403
|
3.4
|
13.2
|
1.0
|
CHA
|
M:BCL403
|
3.4
|
16.5
|
1.0
|
CD2
|
M:HIS202
|
3.4
|
19.5
|
1.0
|
CHD
|
M:BCL403
|
3.5
|
11.2
|
1.0
|
CAB
|
L:BCL302
|
3.6
|
15.8
|
1.0
|
OBB
|
L:BCL302
|
3.9
|
21.9
|
1.0
|
C3D
|
M:BCL403
|
4.2
|
15.7
|
1.0
|
ND1
|
M:HIS202
|
4.2
|
10.8
|
1.0
|
C3B
|
L:BCL302
|
4.3
|
9.1
|
1.0
|
C2C
|
M:BCL403
|
4.3
|
12.5
|
1.0
|
C3A
|
M:BCL403
|
4.3
|
19.8
|
1.0
|
C2A
|
M:BCL403
|
4.3
|
13.5
|
1.0
|
C3C
|
M:BCL403
|
4.3
|
21.6
|
1.0
|
C3B
|
M:BCL403
|
4.4
|
13.7
|
1.0
|
C2B
|
M:BCL403
|
4.4
|
15.2
|
1.0
|
C2D
|
M:BCL403
|
4.4
|
12.7
|
1.0
|
CG
|
M:HIS202
|
4.4
|
16.0
|
1.0
|
CD1
|
M:ILE206
|
4.8
|
15.1
|
1.0
|
CBD
|
M:BCL403
|
4.9
|
20.5
|
1.0
|
CMC
|
M:BCL403
|
5.0
|
9.3
|
1.0
|
|
Magnesium binding site 6 out
of 46 in 8z82
Go back to
Magnesium Binding Sites List in 8z82
Magnesium binding site 6 out
of 46 in the Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg101
b:33.2
occ:1.00
|
MG
|
A:BCL101
|
0.0
|
33.2
|
1.0
|
NC
|
A:BCL101
|
2.0
|
31.5
|
1.0
|
NA
|
A:BCL101
|
2.0
|
37.1
|
1.0
|
ND
|
A:BCL101
|
2.0
|
32.5
|
1.0
|
NB
|
A:BCL101
|
2.0
|
27.8
|
1.0
|
NE2
|
A:HIS29
|
2.4
|
16.3
|
1.0
|
C4D
|
A:BCL101
|
2.9
|
26.1
|
1.0
|
C4A
|
A:BCL101
|
3.0
|
26.4
|
1.0
|
C4C
|
A:BCL101
|
3.0
|
27.9
|
1.0
|
C1A
|
A:BCL101
|
3.0
|
30.1
|
1.0
|
C1C
|
A:BCL101
|
3.0
|
28.2
|
1.0
|
C1B
|
A:BCL101
|
3.0
|
28.5
|
1.0
|
C4B
|
A:BCL101
|
3.1
|
22.6
|
1.0
|
CE1
|
A:HIS29
|
3.1
|
15.4
|
1.0
|
C1D
|
A:BCL101
|
3.2
|
25.9
|
1.0
|
CHB
|
A:BCL101
|
3.3
|
29.1
|
1.0
|
CHC
|
A:BCL101
|
3.4
|
26.3
|
1.0
|
CHA
|
A:BCL101
|
3.4
|
21.8
|
1.0
|
CHD
|
A:BCL101
|
3.5
|
18.3
|
1.0
|
CD2
|
A:HIS29
|
3.6
|
16.6
|
1.0
|
CMB
|
0:BCL102
|
3.9
|
31.0
|
1.0
|
C3D
|
A:BCL101
|
4.2
|
27.3
|
1.0
|
C27
|
0:PGV103
|
4.2
|
50.8
|
1.0
|
CBB
|
0:BCL102
|
4.2
|
21.9
|
1.0
|
C3A
|
A:BCL101
|
4.3
|
26.1
|
1.0
|
C2A
|
A:BCL101
|
4.3
|
30.2
|
1.0
|
C3C
|
A:BCL101
|
4.3
|
27.9
|
1.0
|
C2C
|
A:BCL101
|
4.3
|
31.2
|
1.0
|
ND1
|
A:HIS29
|
4.4
|
18.3
|
1.0
|
C3B
|
A:BCL101
|
4.4
|
26.0
|
1.0
|
C2B
|
A:BCL101
|
4.4
|
30.8
|
1.0
|
C2D
|
A:BCL101
|
4.4
|
27.5
|
1.0
|
C25
|
0:PGV103
|
4.4
|
54.1
|
1.0
|
CMD
|
B:BCL102
|
4.6
|
29.0
|
1.0
|
CG
|
A:HIS29
|
4.6
|
19.0
|
1.0
|
C2B
|
0:BCL102
|
4.7
|
29.6
|
1.0
|
C26
|
0:PGV103
|
4.8
|
53.5
|
1.0
|
CBD
|
A:BCL101
|
4.9
|
25.1
|
1.0
|
CMA
|
A:BCL101
|
4.9
|
28.3
|
1.0
|
|
Magnesium binding site 7 out
of 46 in 8z82
Go back to
Magnesium Binding Sites List in 8z82
Magnesium binding site 7 out
of 46 in the Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg102
b:29.4
occ:1.00
|
MG
|
B:BCL102
|
0.0
|
29.4
|
1.0
|
NA
|
B:BCL102
|
2.0
|
27.3
|
1.0
|
NC
|
B:BCL102
|
2.0
|
35.9
|
1.0
|
ND
|
B:BCL102
|
2.0
|
27.0
|
1.0
|
NB
|
B:BCL102
|
2.0
|
28.8
|
1.0
|
NE2
|
B:HIS37
|
2.1
|
25.2
|
1.0
|
C4D
|
B:BCL102
|
2.9
|
17.1
|
1.0
|
C1A
|
B:BCL102
|
3.0
|
26.4
|
1.0
|
C4A
|
B:BCL102
|
3.0
|
27.7
|
1.0
|
C4C
|
B:BCL102
|
3.0
|
23.3
|
1.0
|
C1C
|
B:BCL102
|
3.0
|
23.7
|
1.0
|
CE1
|
B:HIS37
|
3.0
|
19.5
|
1.0
|
C1B
|
B:BCL102
|
3.1
|
26.2
|
1.0
|
C4B
|
B:BCL102
|
3.1
|
27.1
|
1.0
|
C1D
|
B:BCL102
|
3.2
|
24.9
|
1.0
|
CD2
|
B:HIS37
|
3.2
|
21.1
|
1.0
|
CHB
|
B:BCL102
|
3.4
|
27.0
|
1.0
|
CHC
|
B:BCL102
|
3.4
|
22.4
|
1.0
|
CHA
|
B:BCL102
|
3.4
|
21.2
|
1.0
|
CHD
|
B:BCL102
|
3.5
|
20.8
|
1.0
|
CMB
|
D:BCL101
|
4.0
|
25.2
|
1.0
|
ND1
|
B:HIS37
|
4.2
|
23.9
|
1.0
|
C3D
|
B:BCL102
|
4.2
|
21.2
|
1.0
|
C2A
|
B:BCL102
|
4.3
|
27.7
|
1.0
|
C3A
|
B:BCL102
|
4.3
|
29.2
|
1.0
|
CG
|
B:HIS37
|
4.3
|
24.9
|
1.0
|
C3C
|
B:BCL102
|
4.3
|
21.6
|
1.0
|
C2C
|
B:BCL102
|
4.3
|
22.3
|
1.0
|
C3B
|
B:BCL102
|
4.4
|
23.6
|
1.0
|
CBB
|
D:BCL101
|
4.4
|
16.2
|
1.0
|
C2B
|
B:BCL102
|
4.4
|
29.2
|
1.0
|
C2D
|
B:BCL102
|
4.4
|
25.9
|
1.0
|
CMD
|
A:BCL101
|
4.6
|
31.2
|
1.0
|
C2B
|
D:BCL101
|
4.7
|
22.3
|
1.0
|
C11
|
B:PGV104
|
4.9
|
41.8
|
1.0
|
CAB
|
D:BCL101
|
4.9
|
21.4
|
1.0
|
CBD
|
B:BCL102
|
4.9
|
19.6
|
1.0
|
CD1
|
A:ILE28
|
4.9
|
23.5
|
1.0
|
|
Magnesium binding site 8 out
of 46 in 8z82
Go back to
Magnesium Binding Sites List in 8z82
Magnesium binding site 8 out
of 46 in the Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg101
b:34.5
occ:1.00
|
MG
|
D:BCL101
|
0.0
|
34.5
|
1.0
|
NA
|
D:BCL101
|
2.0
|
28.4
|
1.0
|
NC
|
D:BCL101
|
2.0
|
31.1
|
1.0
|
ND
|
D:BCL101
|
2.0
|
27.4
|
1.0
|
NB
|
D:BCL101
|
2.0
|
22.8
|
1.0
|
NE2
|
D:HIS29
|
2.5
|
14.8
|
1.0
|
C4D
|
D:BCL101
|
2.9
|
25.2
|
1.0
|
C1A
|
D:BCL101
|
3.0
|
26.5
|
1.0
|
C4A
|
D:BCL101
|
3.0
|
20.7
|
1.0
|
C4C
|
D:BCL101
|
3.0
|
19.3
|
1.0
|
C1C
|
D:BCL101
|
3.0
|
24.3
|
1.0
|
C1B
|
D:BCL101
|
3.0
|
14.7
|
1.0
|
C4B
|
D:BCL101
|
3.1
|
18.7
|
1.0
|
C1D
|
D:BCL101
|
3.2
|
22.1
|
1.0
|
CE1
|
D:HIS29
|
3.2
|
11.3
|
1.0
|
CHB
|
D:BCL101
|
3.3
|
20.3
|
1.0
|
CHC
|
D:BCL101
|
3.4
|
20.3
|
1.0
|
CHA
|
D:BCL101
|
3.4
|
23.9
|
1.0
|
CBB
|
B:BCL102
|
3.5
|
38.0
|
1.0
|
CHD
|
D:BCL101
|
3.5
|
16.3
|
1.0
|
CD2
|
D:HIS29
|
3.7
|
14.9
|
1.0
|
C27
|
B:PGV103
|
4.0
|
48.0
|
1.0
|
C29
|
B:PGV103
|
4.0
|
47.9
|
1.0
|
C3D
|
D:BCL101
|
4.2
|
23.8
|
1.0
|
C3C
|
D:BCL101
|
4.3
|
28.6
|
1.0
|
C2A
|
D:BCL101
|
4.3
|
26.0
|
1.0
|
C3A
|
D:BCL101
|
4.3
|
18.9
|
1.0
|
C2C
|
D:BCL101
|
4.3
|
20.4
|
1.0
|
C3B
|
D:BCL101
|
4.4
|
20.2
|
1.0
|
C2B
|
D:BCL101
|
4.4
|
22.3
|
1.0
|
C2D
|
D:BCL101
|
4.4
|
18.1
|
1.0
|
ND1
|
D:HIS29
|
4.4
|
16.1
|
1.0
|
CAB
|
B:BCL102
|
4.6
|
30.1
|
1.0
|
C28
|
B:PGV103
|
4.6
|
48.9
|
1.0
|
CMD
|
E:BCL101
|
4.7
|
24.3
|
1.0
|
CG
|
D:HIS29
|
4.7
|
12.6
|
1.0
|
CMB
|
B:BCL102
|
4.7
|
24.2
|
1.0
|
CBD
|
D:BCL101
|
4.9
|
19.0
|
1.0
|
C3B
|
B:BCL102
|
5.0
|
23.6
|
1.0
|
|
Magnesium binding site 9 out
of 46 in 8z82
Go back to
Magnesium Binding Sites List in 8z82
Magnesium binding site 9 out
of 46 in the Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg102
b:47.1
occ:1.00
|
MG
|
D:BCL102
|
0.0
|
47.1
|
1.0
|
NC
|
D:BCL102
|
2.0
|
46.7
|
1.0
|
NA
|
D:BCL102
|
2.0
|
46.3
|
1.0
|
ND
|
D:BCL102
|
2.0
|
45.8
|
1.0
|
NB
|
D:BCL102
|
2.0
|
41.2
|
1.0
|
NE2
|
D:HIS18
|
2.4
|
32.8
|
1.0
|
C4D
|
D:BCL102
|
2.9
|
40.2
|
1.0
|
C4C
|
D:BCL102
|
3.0
|
43.5
|
1.0
|
C4A
|
D:BCL102
|
3.0
|
41.7
|
1.0
|
C1C
|
D:BCL102
|
3.0
|
42.6
|
1.0
|
C1A
|
D:BCL102
|
3.0
|
43.3
|
1.0
|
C1B
|
D:BCL102
|
3.0
|
38.0
|
1.0
|
C4B
|
D:BCL102
|
3.1
|
42.3
|
1.0
|
C1D
|
D:BCL102
|
3.2
|
41.0
|
1.0
|
CE1
|
D:HIS18
|
3.2
|
32.6
|
1.0
|
CHB
|
D:BCL102
|
3.3
|
38.9
|
1.0
|
CHC
|
D:BCL102
|
3.4
|
45.4
|
1.0
|
CHA
|
D:BCL102
|
3.4
|
39.3
|
1.0
|
CD2
|
D:HIS18
|
3.5
|
36.7
|
1.0
|
CHD
|
D:BCL102
|
3.5
|
42.8
|
1.0
|
C14
|
B:BCL102
|
3.7
|
36.4
|
1.0
|
C3D
|
D:BCL102
|
4.2
|
41.3
|
1.0
|
C3C
|
D:BCL102
|
4.2
|
46.2
|
1.0
|
C2C
|
D:BCL102
|
4.2
|
42.8
|
1.0
|
C3A
|
D:BCL102
|
4.3
|
40.9
|
1.0
|
C2A
|
D:BCL102
|
4.3
|
40.5
|
1.0
|
ND1
|
D:HIS18
|
4.3
|
27.8
|
1.0
|
C3B
|
D:BCL102
|
4.4
|
46.6
|
1.0
|
C2B
|
D:BCL102
|
4.4
|
42.3
|
1.0
|
C2D
|
D:BCL102
|
4.4
|
39.4
|
1.0
|
C13
|
B:BCL102
|
4.4
|
31.4
|
1.0
|
CG
|
D:HIS18
|
4.5
|
33.8
|
1.0
|
C16
|
B:BCL102
|
4.6
|
32.5
|
1.0
|
CBD
|
D:BCL102
|
4.9
|
39.1
|
1.0
|
CMC
|
D:BCL102
|
4.9
|
44.6
|
1.0
|
CB
|
E:ALA25
|
4.9
|
31.9
|
1.0
|
CMA
|
D:BCL102
|
5.0
|
43.5
|
1.0
|
|
Magnesium binding site 10 out
of 46 in 8z82
Go back to
Magnesium Binding Sites List in 8z82
Magnesium binding site 10 out
of 46 in the Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Photosynthetic LH1-Rc-Hipip Complex From the Purple Bacterium Halorhodospira Halophila within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg101
b:23.7
occ:1.00
|
MG
|
E:BCL101
|
0.0
|
23.7
|
1.0
|
NC
|
E:BCL101
|
2.0
|
32.7
|
1.0
|
NA
|
E:BCL101
|
2.0
|
27.6
|
1.0
|
ND
|
E:BCL101
|
2.0
|
24.2
|
1.0
|
NB
|
E:BCL101
|
2.0
|
32.6
|
1.0
|
NE2
|
E:HIS37
|
2.2
|
19.1
|
1.0
|
C4D
|
E:BCL101
|
3.0
|
21.6
|
1.0
|
C1A
|
E:BCL101
|
3.0
|
27.0
|
1.0
|
C4C
|
E:BCL101
|
3.0
|
28.2
|
1.0
|
C4A
|
E:BCL101
|
3.0
|
26.4
|
1.0
|
C1C
|
E:BCL101
|
3.0
|
25.9
|
1.0
|
C1B
|
E:BCL101
|
3.1
|
30.2
|
1.0
|
C4B
|
E:BCL101
|
3.1
|
25.8
|
1.0
|
C1D
|
E:BCL101
|
3.2
|
21.8
|
1.0
|
CE1
|
E:HIS37
|
3.2
|
22.7
|
1.0
|
CD2
|
E:HIS37
|
3.2
|
17.5
|
1.0
|
CHB
|
E:BCL101
|
3.4
|
22.1
|
1.0
|
CHC
|
E:BCL101
|
3.4
|
24.8
|
1.0
|
CHA
|
E:BCL101
|
3.4
|
24.9
|
1.0
|
CHD
|
E:BCL101
|
3.5
|
24.9
|
1.0
|
CBB
|
F:BCL103
|
3.8
|
20.3
|
1.0
|
C3D
|
E:BCL101
|
4.2
|
23.4
|
1.0
|
C2A
|
E:BCL101
|
4.3
|
28.2
|
1.0
|
C3A
|
E:BCL101
|
4.3
|
27.5
|
1.0
|
C3C
|
E:BCL101
|
4.3
|
25.4
|
1.0
|
ND1
|
E:HIS37
|
4.3
|
23.8
|
1.0
|
C2C
|
E:BCL101
|
4.3
|
24.0
|
1.0
|
CG
|
E:HIS37
|
4.4
|
19.8
|
1.0
|
CMD
|
D:BCL101
|
4.4
|
28.2
|
1.0
|
C3B
|
E:BCL101
|
4.4
|
29.1
|
1.0
|
C2D
|
E:BCL101
|
4.4
|
22.8
|
1.0
|
C2B
|
E:BCL101
|
4.4
|
27.7
|
1.0
|
CMB
|
F:BCL103
|
4.4
|
18.3
|
1.0
|
CAB
|
F:BCL103
|
4.7
|
21.5
|
1.0
|
C2B
|
F:BCL103
|
4.8
|
21.5
|
1.0
|
CD1
|
D:ILE28
|
4.9
|
19.2
|
1.0
|
CBD
|
E:BCL101
|
4.9
|
19.3
|
1.0
|
C3B
|
F:BCL103
|
5.0
|
14.1
|
1.0
|
|
Reference:
K.Tani,
R.Kanno,
K.V.P.Nagashima,
M.Kawakami,
N.Hiwatashi,
K.Nakata,
S.Nagashima,
K.Inoue,
S.Takaichi,
E.R.Purba,
M.Hall,
L.J.Yu,
M.T.Madigan,
A.Mizoguchi,
B.M.Humbel,
Y.Kimura,
Z.Y.Wang-Otomo.
A Native LH1-Rc-Hipip Supercomplex From An Extremophilic Phototroph. Commun Biol V. 8 42 2025.
ISSN: ESSN 2399-3642
PubMed: 39799244
DOI: 10.1038/S42003-024-07421-W
Page generated: Sun Feb 9 08:13:03 2025
|