Magnesium in PDB 8zkc: Iron-Sulfur Cluster Transfer Protein Apbc

The structure of Iron-Sulfur Cluster Transfer Protein Apbc, PDB code: 8zkc was solved by J.Yang, L.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	55.51 / 2.85
Space group	P 43 2 2
Cell size a, b, c (Å), α, β, γ (°)	74.27, 74.27, 167.11, 90, 90, 90
R / Rfree (%)	23.5 / 27.9

The binding sites of Magnesium atom in the Iron-Sulfur Cluster Transfer Protein Apbc (pdb code 8zkc). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Iron-Sulfur Cluster Transfer Protein Apbc, PDB code: 8zkc:

Magnesium binding site 1 out of 1 in the Iron-Sulfur Cluster Transfer Protein Apbc


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Iron-Sulfur Cluster Transfer Protein Apbc within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:32.8 occ:1.00 O A:GLY148 2.4 63.6 1.0 OD2 A:ASP145 2.5 50.1 1.0 OG A:SER122 2.5 35.9 1.0 OG A:SER150 2.6 42.5 1.0 CG A:ASP145 3.4 50.7 1.0 C A:GLY148 3.5 65.4 1.0 CB A:ASP145 3.6 48.0 1.0 CB A:SER150 3.6 42.9 1.0 CB A:SER122 3.7 35.0 1.0 N A:SER150 3.8 46.7 1.0 NZ A:LYS121 3.9 32.1 1.0 OD2 A:ASP222 4.1 40.2 1.0 CA A:GLY148 4.3 67.8 1.0 CA A:SER150 4.3 44.8 1.0 OD1 A:ASP145 4.5 53.2 1.0 N A:PRO149 4.6 48.7 1.0 OD1 A:ASP143 4.7 37.9 1.0 C A:PRO149 4.7 44.1 1.0 CA A:PRO149 4.7 46.4 1.0 CE A:LYS121 4.9 32.3 1.0 CG A:ASP222 4.9 39.5 1.0 N A:GLY148 4.9 69.8 1.0 CA A:SER122 4.9 34.0 1.0

J.Yang, Y.F.Duan, L.Liu. Crystal Structure of the Iron-Sulfur Cluster Transfer Protein Apbc From Escherichia Coli. Biochem.Biophys.Res.Commun. V. 722 50167 2024.
ISSN: ESSN 1090-2104
PubMed: 38797154
DOI: 10.1016/J.BBRC.2024.150167