Magnesium in PDB 9b3r: The Structure of Human Cardiac F-Actin
Magnesium Binding Sites:
The binding sites of Magnesium atom in the The Structure of Human Cardiac F-Actin
(pdb code 9b3r). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the
The Structure of Human Cardiac F-Actin, PDB code: 9b3r:
Jump to Magnesium binding site number:
1;
2;
3;
Magnesium binding site 1 out
of 3 in 9b3r
Go back to
Magnesium Binding Sites List in 9b3r
Magnesium binding site 1 out
of 3 in the The Structure of Human Cardiac F-Actin
![](/pictures/MG/pdb/b3/9b3r-MG-sphere_01.jpg) Mono view
![](/pictures/MG/pdb/b3/9b3r-MG-sphere_01_stereo.jpg) Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of The Structure of Human Cardiac F-Actin within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg401
b:27.8
occ:1.00
|
O3B
|
A:ADP402
|
2.0
|
35.0
|
1.0
|
PB
|
A:ADP402
|
3.2
|
35.0
|
1.0
|
OD1
|
A:ASP154
|
3.3
|
31.5
|
1.0
|
O3A
|
A:ADP402
|
3.5
|
35.0
|
1.0
|
OD2
|
A:ASP154
|
3.6
|
31.5
|
1.0
|
O2B
|
A:ADP402
|
3.7
|
35.0
|
1.0
|
CG
|
A:ASP154
|
3.8
|
31.5
|
1.0
|
CA
|
A:GLY301
|
4.1
|
31.7
|
1.0
|
CA
|
A:GLY156
|
4.3
|
31.5
|
1.0
|
CG2
|
A:VAL339
|
4.4
|
34.5
|
1.0
|
O1B
|
A:ADP402
|
4.5
|
35.0
|
1.0
|
N
|
A:GLY156
|
4.7
|
31.5
|
1.0
|
N
|
A:GLY301
|
4.8
|
31.7
|
1.0
|
CG
|
A:GLN137
|
4.9
|
35.7
|
1.0
|
PA
|
A:ADP402
|
4.9
|
35.0
|
1.0
|
|
Magnesium binding site 2 out
of 3 in 9b3r
Go back to
Magnesium Binding Sites List in 9b3r
Magnesium binding site 2 out
of 3 in the The Structure of Human Cardiac F-Actin
![](/pictures/MG/pdb/b3/9b3r-MG-sphere_02.jpg) Mono view
![](/pictures/MG/pdb/b3/9b3r-MG-sphere_02_stereo.jpg) Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of The Structure of Human Cardiac F-Actin within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg401
b:32.0
occ:1.00
|
O3B
|
D:ADP402
|
2.0
|
40.6
|
1.0
|
PB
|
D:ADP402
|
3.1
|
40.6
|
1.0
|
O3A
|
D:ADP402
|
3.5
|
40.6
|
1.0
|
O2B
|
D:ADP402
|
3.5
|
40.6
|
1.0
|
OD1
|
D:ASP154
|
3.6
|
38.1
|
1.0
|
OD2
|
D:ASP154
|
3.9
|
38.1
|
1.0
|
CG
|
D:ASP154
|
4.2
|
38.1
|
1.0
|
CG2
|
D:VAL339
|
4.2
|
43.4
|
1.0
|
CA
|
D:GLY301
|
4.3
|
38.4
|
1.0
|
O1B
|
D:ADP402
|
4.5
|
40.6
|
1.0
|
CA
|
D:GLY156
|
4.5
|
38.8
|
1.0
|
CG
|
D:GLN137
|
4.8
|
43.5
|
1.0
|
CB
|
D:VAL339
|
4.8
|
43.4
|
1.0
|
NZ
|
D:LYS18
|
4.8
|
48.6
|
1.0
|
N
|
D:GLY301
|
4.9
|
38.4
|
1.0
|
PA
|
D:ADP402
|
4.9
|
40.6
|
1.0
|
O2A
|
D:ADP402
|
5.0
|
40.6
|
1.0
|
|
Magnesium binding site 3 out
of 3 in 9b3r
Go back to
Magnesium Binding Sites List in 9b3r
Magnesium binding site 3 out
of 3 in the The Structure of Human Cardiac F-Actin
![](/pictures/MG/pdb/b3/9b3r-MG-sphere_03.jpg) Mono view
![](/pictures/MG/pdb/b3/9b3r-MG-sphere_03_stereo.jpg) Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of The Structure of Human Cardiac F-Actin within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg401
b:30.7
occ:1.00
|
O3B
|
E:ADP402
|
1.9
|
35.8
|
1.0
|
PB
|
E:ADP402
|
3.2
|
35.8
|
1.0
|
OD1
|
E:ASP154
|
3.3
|
33.3
|
1.0
|
O3A
|
E:ADP402
|
3.5
|
35.8
|
1.0
|
OD2
|
E:ASP154
|
3.5
|
33.3
|
1.0
|
CG
|
E:ASP154
|
3.8
|
33.3
|
1.0
|
O2B
|
E:ADP402
|
3.8
|
35.8
|
1.0
|
CA
|
E:GLY301
|
4.1
|
34.3
|
1.0
|
CA
|
E:GLY156
|
4.4
|
34.0
|
1.0
|
CG2
|
E:VAL339
|
4.4
|
36.6
|
1.0
|
O1B
|
E:ADP402
|
4.4
|
35.8
|
1.0
|
N
|
E:GLY301
|
4.8
|
34.3
|
1.0
|
CG
|
E:GLN137
|
4.8
|
37.4
|
1.0
|
N
|
E:GLY156
|
4.8
|
34.0
|
1.0
|
PA
|
E:ADP402
|
5.0
|
35.8
|
1.0
|
|
Reference:
M.H.Doran,
M.J.Rynkiewicz,
D.Sousa,
A.Cammarato,
W.Lehman.
Structure of Human Cardiac Actin To Be Published.
Page generated: Sat Oct 5 08:52:17 2024
|