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Magnesium in PDB 9b3r: The Structure of Human Cardiac F-Actin

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Structure of Human Cardiac F-Actin (pdb code 9b3r). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the The Structure of Human Cardiac F-Actin, PDB code: 9b3r:
Jump to Magnesium binding site number: 1; 2; 3;

Magnesium binding site 1 out of 3 in 9b3r

Go back to Magnesium Binding Sites List in 9b3r
Magnesium binding site 1 out of 3 in the The Structure of Human Cardiac F-Actin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Structure of Human Cardiac F-Actin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg401

b:27.8
occ:1.00
O3B A:ADP402 2.0 35.0 1.0
PB A:ADP402 3.2 35.0 1.0
OD1 A:ASP154 3.3 31.5 1.0
O3A A:ADP402 3.5 35.0 1.0
OD2 A:ASP154 3.6 31.5 1.0
O2B A:ADP402 3.7 35.0 1.0
CG A:ASP154 3.8 31.5 1.0
CA A:GLY301 4.1 31.7 1.0
CA A:GLY156 4.3 31.5 1.0
CG2 A:VAL339 4.4 34.5 1.0
O1B A:ADP402 4.5 35.0 1.0
N A:GLY156 4.7 31.5 1.0
N A:GLY301 4.8 31.7 1.0
CG A:GLN137 4.9 35.7 1.0
PA A:ADP402 4.9 35.0 1.0

Magnesium binding site 2 out of 3 in 9b3r

Go back to Magnesium Binding Sites List in 9b3r
Magnesium binding site 2 out of 3 in the The Structure of Human Cardiac F-Actin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of The Structure of Human Cardiac F-Actin within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg401

b:32.0
occ:1.00
O3B D:ADP402 2.0 40.6 1.0
PB D:ADP402 3.1 40.6 1.0
O3A D:ADP402 3.5 40.6 1.0
O2B D:ADP402 3.5 40.6 1.0
OD1 D:ASP154 3.6 38.1 1.0
OD2 D:ASP154 3.9 38.1 1.0
CG D:ASP154 4.2 38.1 1.0
CG2 D:VAL339 4.2 43.4 1.0
CA D:GLY301 4.3 38.4 1.0
O1B D:ADP402 4.5 40.6 1.0
CA D:GLY156 4.5 38.8 1.0
CG D:GLN137 4.8 43.5 1.0
CB D:VAL339 4.8 43.4 1.0
NZ D:LYS18 4.8 48.6 1.0
N D:GLY301 4.9 38.4 1.0
PA D:ADP402 4.9 40.6 1.0
O2A D:ADP402 5.0 40.6 1.0

Magnesium binding site 3 out of 3 in 9b3r

Go back to Magnesium Binding Sites List in 9b3r
Magnesium binding site 3 out of 3 in the The Structure of Human Cardiac F-Actin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of The Structure of Human Cardiac F-Actin within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg401

b:30.7
occ:1.00
O3B E:ADP402 1.9 35.8 1.0
PB E:ADP402 3.2 35.8 1.0
OD1 E:ASP154 3.3 33.3 1.0
O3A E:ADP402 3.5 35.8 1.0
OD2 E:ASP154 3.5 33.3 1.0
CG E:ASP154 3.8 33.3 1.0
O2B E:ADP402 3.8 35.8 1.0
CA E:GLY301 4.1 34.3 1.0
CA E:GLY156 4.4 34.0 1.0
CG2 E:VAL339 4.4 36.6 1.0
O1B E:ADP402 4.4 35.8 1.0
N E:GLY301 4.8 34.3 1.0
CG E:GLN137 4.8 37.4 1.0
N E:GLY156 4.8 34.0 1.0
PA E:ADP402 5.0 35.8 1.0

Reference:

M.H.Doran, M.J.Rynkiewicz, D.Sousa, A.Cammarato, W.Lehman. Structure of Human Cardiac Actin To Be Published.
Page generated: Sat Oct 5 08:52:17 2024

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