Magnesium in PDB 9b62: Human RANBP2/Ran(Gtp)/RANGAP1-SUMO1/UBC9/CRM1/Ran(Gtp) - Composite Map and Model

The binding sites of Magnesium atom in the Human RANBP2/Ran(Gtp)/RANGAP1-SUMO1/UBC9/CRM1/Ran(Gtp) - Composite Map and Model (pdb code 9b62). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Human RANBP2/Ran(Gtp)/RANGAP1-SUMO1/UBC9/CRM1/Ran(Gtp) - Composite Map and Model, PDB code: 9b62:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Human RANBP2/Ran(Gtp)/RANGAP1-SUMO1/UBC9/CRM1/Ran(Gtp) - Composite Map and Model


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human RANBP2/Ran(Gtp)/RANGAP1-SUMO1/UBC9/CRM1/Ran(Gtp) - Composite Map and Model within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg302 b:40.2 occ:1.00 OG1 B:THR24 1.9 37.2 1.0 OG1 B:THR42 1.9 40.9 1.0 O1B B:GTP301 1.9 34.7 1.0 O1G B:GTP301 2.3 34.7 1.0 CB B:THR42 3.1 40.9 1.0 CB B:THR24 3.2 37.2 1.0 PB B:GTP301 3.3 34.7 1.0 PG B:GTP301 3.4 34.7 1.0 O3G B:GTP301 3.7 34.7 1.0 N B:THR42 3.7 40.9 1.0 OD2 B:ASP65 3.9 42.1 1.0 O3B B:GTP301 3.9 34.7 1.0 CA B:THR42 3.9 40.9 1.0 N B:THR24 4.0 37.2 1.0 CG2 B:THR24 4.1 37.2 1.0 O3A B:GTP301 4.1 34.7 1.0 CA B:THR24 4.1 37.2 1.0 CG2 B:THR42 4.2 40.9 1.0 O B:VAL40 4.3 39.5 1.0 O2B B:GTP301 4.4 34.7 1.0 OD1 B:ASP65 4.4 42.1 1.0 O B:THR66 4.5 39.2 1.0 CG B:ASP65 4.5 42.1 1.0 O2A B:GTP301 4.5 34.7 1.0 O2G B:GTP301 4.7 34.7 1.0 C B:ALA41 4.7 38.8 1.0 PA B:GTP301 4.7 34.7 1.0 O1A B:GTP301 4.9 34.7 1.0

Magnesium binding site 2 out of 2 in the Human RANBP2/Ran(Gtp)/RANGAP1-SUMO1/UBC9/CRM1/Ran(Gtp) - Composite Map and Model


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Human RANBP2/Ran(Gtp)/RANGAP1-SUMO1/UBC9/CRM1/Ran(Gtp) - Composite Map and Model within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg302 b:46.5 occ:1.00 O1B F:GTP301 1.9 47.0 1.0 O3G F:GTP301 1.9 47.0 1.0 OG1 F:THR42 1.9 47.4 1.0 OG1 F:THR24 2.6 48.4 1.0 CB F:THR42 2.8 47.4 1.0 PG F:GTP301 2.8 47.0 1.0 O1G F:GTP301 2.9 47.0 1.0 PB F:GTP301 3.1 47.0 1.0 O3B F:GTP301 3.4 47.0 1.0 N F:THR42 3.5 47.4 1.0 CA F:THR42 3.7 47.4 1.0 CB F:THR24 3.8 48.4 1.0 O3A F:GTP301 3.8 47.0 1.0 CG2 F:THR42 3.9 47.4 1.0 OD2 F:ASP65 4.0 47.0 1.0 OD1 F:ASP65 4.1 47.0 1.0 O2G F:GTP301 4.1 47.0 1.0 O2B F:GTP301 4.3 47.0 1.0 N F:THR24 4.4 48.4 1.0 O F:THR66 4.4 44.8 1.0 CG F:ASP65 4.5 47.0 1.0 NZ F:LYS23 4.5 45.6 1.0 C F:ALA41 4.6 48.3 1.0 CE F:LYS23 4.6 45.6 1.0 CA F:THR24 4.7 48.4 1.0 PA F:GTP301 4.7 47.0 1.0 O1A F:GTP301 4.8 47.0 1.0 C F:THR42 4.8 47.4 1.0 CG2 F:THR24 4.8 48.4 1.0 O F:THR42 4.8 47.4 1.0 O F:VAL40 4.9 50.5 1.0 O2A F:GTP301 4.9 47.0 1.0 CA F:ALA41 5.0 48.3 1.0

V.Baytshtok, M.A.Dimattia, C.D.Lima. Structure and Activities of A Human RANBP2/Ran(Gtp)/RANGAP1-SUMO1/UBC9/CRM1/Ran(Gtp) Complex To Be Published.