Magnesium in PDB 9bi9: Gii.4 Sydney 2012 Polymerase Domain of Propol Precursor

The binding sites of Magnesium atom in the Gii.4 Sydney 2012 Polymerase Domain of Propol Precursor (pdb code 9bi9). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Gii.4 Sydney 2012 Polymerase Domain of Propol Precursor, PDB code: 9bi9:

Magnesium binding site 1 out of 1 in the Gii.4 Sydney 2012 Polymerase Domain of Propol Precursor


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Gii.4 Sydney 2012 Polymerase Domain of Propol Precursor within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg601 b:139.4 occ:1.00 OD1 A:ASP240 2.8 150.9 1.0 HA A:ASP344 3.1 152.3 1.0 OD2 A:ASP240 3.2 150.9 1.0 H A:GLU345 3.2 146.3 1.0 CG A:ASP240 3.3 150.9 1.0 HG1 A:THR389 3.4 151.4 1.0 OD1 A:ASP344 3.6 152.3 1.0 O A:THR389 3.8 151.4 1.0 N A:GLU345 4.0 146.3 1.0 CA A:ASP344 4.0 152.3 1.0 HB3 A:ASP344 4.0 152.3 1.0 OG1 A:THR389 4.1 151.4 1.0 HA A:ASP242 4.1 154.5 1.0 O A:GLU345 4.1 146.3 1.0 H A:ASP242 4.2 154.5 1.0 HB2 A:ASP242 4.2 154.5 1.0 CG A:ASP344 4.3 152.3 1.0 CB A:ASP344 4.3 152.3 1.0 HA A:PHE390 4.3 148.2 1.0 C A:ASP344 4.6 152.3 1.0 HG2 A:GLU345 4.6 146.3 1.0 C A:THR389 4.7 151.4 1.0 OD1 A:ASP242 4.7 154.5 1.0 HD1 A:PHE390 4.7 148.2 1.0 CA A:ASP242 4.7 154.5 1.0 N A:ASP242 4.8 154.5 1.0 CB A:ASP240 4.8 150.9 1.0 CB A:ASP242 4.9 154.5 1.0 HB2 A:ASP240 5.0 150.9 1.0 C A:GLU345 5.0 146.3 1.0

A.M.Mcsweeney, A.Eruera, W.K.Ward, K.L.Krause. Activity and Cryo-Em Structure of the Polymerase Domain of Human Norovirus Propol To Be Published.