Magnesium in PDB 9c0j: Structure of the Elongating DRT2 Reverse Transcriptase in Complex with Its Non-Coding Rna and Dntps

Other elements in 9c0j:

The structure of Structure of the Elongating DRT2 Reverse Transcriptase in Complex with Its Non-Coding Rna and Dntps also contains other interesting chemical elements:

Potassium (K) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of the Elongating DRT2 Reverse Transcriptase in Complex with Its Non-Coding Rna and Dntps (pdb code 9c0j). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the Elongating DRT2 Reverse Transcriptase in Complex with Its Non-Coding Rna and Dntps, PDB code: 9c0j:

Magnesium binding site 1 out of 1 in 9c0j

Go back to Magnesium Binding Sites List in 9c0j
Magnesium binding site 1 out of 1 in the Structure of the Elongating DRT2 Reverse Transcriptase in Complex with Its Non-Coding Rna and Dntps


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Elongating DRT2 Reverse Transcriptase in Complex with Its Non-Coding Rna and Dntps within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg501

b:23.0
occ:1.00
O1B A:TTP502 2.1 30.7 1.0
OD2 A:ASP269 2.1 26.6 1.0
O A:LEU141 2.3 15.9 1.0
CG A:ASP269 3.3 20.8 1.0
C A:LEU141 3.4 16.5 1.0
PB A:TTP502 3.4 51.2 1.0
O1A A:TTP502 3.4 36.0 1.0
O3B A:TTP502 3.7 38.1 1.0
OD2 A:ASP140 3.8 27.0 1.0
N A:PHE144 3.9 14.6 1.0
N A:GLY143 3.9 16.5 1.0
CB A:PHE144 4.0 9.1 1.0
CB A:ASP269 4.1 11.8 1.0
OD1 A:ASP269 4.2 22.6 1.0
CA A:LEU141 4.2 16.7 1.0
O3A A:TTP502 4.3 40.6 1.0
N A:SER142 4.3 17.1 1.0
PA A:TTP502 4.3 51.6 1.0
N A:LEU141 4.3 14.2 1.0
CB A:LEU141 4.4 15.5 1.0
CA A:SER142 4.4 19.5 1.0
C A:SER142 4.4 21.4 1.0
CG A:ASP140 4.5 23.6 1.0
O2B A:TTP502 4.5 36.3 1.0
C5' A:TTP502 4.5 29.3 1.0
CA A:GLY143 4.5 10.1 1.0
CA A:PHE144 4.6 6.3 1.0
OD1 A:ASP140 4.6 22.2 1.0
O5' A:TTP502 4.6 35.5 1.0
C A:GLY143 4.7 12.9 1.0

Reference:

M.E.Wilkinson, D.Li, A.Gao, R.K.Macrae, F.Zhang. Phage-Triggered Reverse Transcription Assembles A Toxic Repetitive Gene From A Noncoding Rna Science 2024.
ISSN: ESSN 1095-9203
DOI: 10.1126/SCIENCE.ADQ3977
Page generated: Sat Oct 5 08:52:53 2024

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