Magnesium in PDB 9dam: A Darpin Fused to the 1TEL Crystallization Chaperone Via A Direct Helical Fusion

The structure of A Darpin Fused to the 1TEL Crystallization Chaperone Via A Direct Helical Fusion, PDB code: 9dam was solved by M.J.Pedroza Romo, J.C.Averett, A.Keliiliki, E.W.Wilson, C.Smith, D.Hansen, B.Averett, J.Gonzalez, E.W.Noakes, R.Nickles, T.Doukov, J.D.Moody, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.40 / 1.78
Space group	P 65
Cell size a, b, c (Å), α, β, γ (°)	83.29, 83.29, 58.434, 90, 90, 120
R / Rfree (%)	20.5 / 22.1

The structure of A Darpin Fused to the 1TEL Crystallization Chaperone Via A Direct Helical Fusion also contains other interesting chemical elements:

Sodium	(Na)	1 atom
Chlorine	(Cl)	3 atoms

The binding sites of Magnesium atom in the A Darpin Fused to the 1TEL Crystallization Chaperone Via A Direct Helical Fusion (pdb code 9dam). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the A Darpin Fused to the 1TEL Crystallization Chaperone Via A Direct Helical Fusion, PDB code: 9dam:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the A Darpin Fused to the 1TEL Crystallization Chaperone Via A Direct Helical Fusion


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of A Darpin Fused to the 1TEL Crystallization Chaperone Via A Direct Helical Fusion within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg305 b:44.0 occ:1.00 OD2 A:ASP183 2.6 31.3 1.0 ND1 A:HIS187 2.9 29.2 1.0 HB2 A:ASP185 3.1 36.0 1.0 HB2 A:HIS187 3.3 33.8 1.0 OD2 A:ASP185 3.4 41.0 1.0 O A:HOH462 3.5 35.7 1.0 CG A:ASP183 3.6 32.1 1.0 HD21 A:LEU192 3.6 28.9 1.0 OD1 A:ASP183 3.8 29.5 1.0 CE1 A:HIS187 3.9 29.4 1.0 CG A:HIS187 3.9 29.6 1.0 HD11 A:ILE154 3.9 32.5 1.0 HE1 A:HIS187 4.0 35.5 1.0 CB A:ASP185 4.0 30.9 1.0 CB A:HIS187 4.0 27.3 1.0 CG A:ASP185 4.1 38.6 1.0 HB3 A:HIS187 4.3 33.8 1.0 H A:ASP185 4.4 39.8 1.0 HB3 A:ASP185 4.4 36.0 1.0 CD2 A:LEU192 4.5 24.9 1.0 O A:HOH486 4.6 46.9 1.0 HD11 A:LEU192 4.7 50.4 1.0 H A:HIS187 4.8 32.5 1.0 HD22 A:LEU192 4.8 28.9 1.0 HD23 A:LEU192 4.8 28.9 1.0 CD1 A:ILE154 4.9 26.9 1.0 CB A:ASP183 4.9 29.3 1.0

Magnesium binding site 2 out of 2 in the A Darpin Fused to the 1TEL Crystallization Chaperone Via A Direct Helical Fusion


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of A Darpin Fused to the 1TEL Crystallization Chaperone Via A Direct Helical Fusion within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg306 b:58.4 occ:1.00 H A:LEU166 2.6 30.4 1.0 O A:ACY301 2.9 46.9 1.0 O A:GLY164 2.9 35.0 1.0 HA A:HIS165 3.1 33.7 1.0 C A:ACY301 3.3 48.2 1.0 N A:LEU166 3.4 28.5 1.0 OXT A:ACY301 3.4 52.5 1.0 HB3 A:LEU166 3.5 41.1 1.0 HB2 A:LEU166 3.8 41.1 1.0 CA A:HIS165 4.0 29.5 1.0 CB A:LEU166 4.0 34.7 1.0 C A:GLY164 4.0 33.6 1.0 H A:GLU167 4.1 37.7 1.0 O A:HOH450 4.1 37.2 1.0 C A:HIS165 4.1 27.5 1.0 CA A:LEU166 4.3 31.8 1.0 H2 A:ACY301 4.4 33.0 1.0 HD2 A:HIS165 4.4 39.5 1.0 N A:HIS165 4.5 29.1 1.0 CH3 A:ACY301 4.5 27.3 1.0 N A:GLU167 4.9 32.2 1.0

M.J.Pedroza Romo, J.C.Averett, A.Keliiliki, E.W.Wilson, C.Smith, D.Hansen, B.Averett, J.Gonzalez, E.W.Noakes, R.Nickles, T.Doukov, J.D.Moody. Optimal Telsam-Target Protein Linker Character Is Target Protein Dependent To Be Published.