Magnesium in PDB 9fz4: Sars Cov-2 NSP10 in Complex with Theexon Domain From NSP14

Enzymatic activity of Sars Cov-2 NSP10 in Complex with Theexon Domain From NSP14

All present enzymatic activity of Sars Cov-2 NSP10 in Complex with Theexon Domain From NSP14:
2.1.1.56;

Protein crystallography data

The structure of Sars Cov-2 NSP10 in Complex with Theexon Domain From NSP14, PDB code: 9fz4 was solved by S.Z.Fisher, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 53.94 / 2.44
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 62.034, 70.724, 109.205, 90, 90, 90
R / Rfree (%) 18.2 / 22.9

Other elements in 9fz4:

The structure of Sars Cov-2 NSP10 in Complex with Theexon Domain From NSP14 also contains other interesting chemical elements:

Zinc (Zn) 4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Sars Cov-2 NSP10 in Complex with Theexon Domain From NSP14 (pdb code 9fz4). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Sars Cov-2 NSP10 in Complex with Theexon Domain From NSP14, PDB code: 9fz4:

Magnesium binding site 1 out of 1 in 9fz4

Go back to Magnesium Binding Sites List in 9fz4
Magnesium binding site 1 out of 1 in the Sars Cov-2 NSP10 in Complex with Theexon Domain From NSP14


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Sars Cov-2 NSP10 in Complex with Theexon Domain From NSP14 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg303

b:49.0
occ:1.00
OE2 B:GLU191 2.6 40.4 1.0
O B:TRP186 2.6 35.7 1.0
O B:HOH475 3.0 44.3 1.0
O B:HOH486 3.1 34.4 1.0
OD2 B:ASP90 3.2 45.9 1.0
CD B:GLU191 3.2 39.2 1.0
OE1 B:GLU191 3.3 39.0 1.0
O B:ALA187 3.3 40.5 1.0
O B:HOH511 3.4 45.1 1.0
C B:TRP186 3.9 33.7 1.0
O B:HOH500 3.9 39.2 1.0
O B:HOH412 4.1 32.5 1.0
C B:ALA187 4.1 36.5 1.0
CG B:ASP90 4.4 45.1 1.0
CB B:ALA187 4.4 27.2 1.0
CG B:GLU191 4.6 40.0 1.0
CA B:ALA187 4.7 36.6 1.0
N B:ALA187 4.7 36.7 1.0
CA B:TRP186 4.9 37.3 1.0
N B:TRP186 4.9 34.2 1.0

Reference:

S.Z.Fisher, S.Z.Fisher. N/A N/A.
Page generated: Sat Oct 5 09:35:35 2024

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