Magnesium in PDB 9gcs: Rho-Atp-Psu Complex II

Magnesium Binding Sites:

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>>> Page 1 <<< Page 2, Binding sites: 11 - 12;

Binding sites:

The binding sites of Magnesium atom in the Rho-Atp-Psu Complex II (pdb code 9gcs). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 12 binding sites of Magnesium where determined in the Rho-Atp-Psu Complex II, PDB code: 9gcs:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 12 in 9gcs

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Magnesium binding site 1 out of 12 in the Rho-Atp-Psu Complex II


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Rho-Atp-Psu Complex II within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg502

b:140.1
occ:1.00
O3B C:ATP501 1.9 141.1 1.0
O2G C:ATP501 2.1 141.1 1.0
O1B C:ATP501 2.1 141.1 1.0
OG1 C:THR185 2.1 126.7 1.0
PG C:ATP501 2.3 141.1 1.0
PB C:ATP501 2.4 141.1 1.0
NZ C:LYS184 2.6 130.7 1.0
O1G C:ATP501 3.0 141.1 1.0
CB C:THR185 3.3 126.7 1.0
CG C:LYS184 3.3 130.7 1.0
O3A C:ATP501 3.5 141.1 1.0
N C:THR185 3.5 126.7 1.0
O2B C:ATP501 3.5 141.1 1.0
CE C:LYS184 3.6 130.7 1.0
O3G C:ATP501 3.7 141.1 1.0
CA C:THR185 3.9 126.7 1.0
O1A C:ATP501 4.0 141.1 1.0
CD C:LYS184 4.1 130.7 1.0
PA C:ATP501 4.3 141.1 1.0
N C:LYS184 4.4 130.7 1.0
CG2 C:THR185 4.5 126.7 1.0
C C:LYS184 4.5 130.7 1.0
CB C:LYS184 4.6 130.7 1.0
CA C:LYS184 4.7 130.7 1.0
OE2 C:GLU211 5.0 124.9 1.0
O2A C:ATP501 5.0 141.1 1.0

Magnesium binding site 2 out of 12 in 9gcs

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Magnesium binding site 2 out of 12 in the Rho-Atp-Psu Complex II


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Rho-Atp-Psu Complex II within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg502

b:133.7
occ:1.00
O1B D:ATP501 2.1 126.9 1.0
OG1 D:THR185 2.1 126.0 1.0
O2G D:ATP501 2.1 126.9 1.0
CG2 D:THR185 2.5 126.0 1.0
O1A D:ATP501 2.7 126.9 1.0
CB D:THR185 2.8 126.0 1.0
PB D:ATP501 2.8 126.9 1.0
PA D:ATP501 3.0 126.9 1.0
O2A D:ATP501 3.0 126.9 1.0
O3A D:ATP501 3.1 126.9 1.0
O3B D:ATP501 3.1 126.9 1.0
PG D:ATP501 3.1 126.9 1.0
N D:THR185 3.3 126.0 1.0
O3G D:ATP501 3.6 126.9 1.0
CA D:THR185 3.6 126.0 1.0
O2B D:ATP501 4.3 126.9 1.0
N D:LYS184 4.3 121.5 1.0
O1G D:ATP501 4.4 126.9 1.0
C D:LYS184 4.5 121.5 1.0
O5' D:ATP501 4.6 126.9 1.0
C D:THR185 4.7 126.0 1.0
N D:MET186 4.7 125.6 1.0
CA D:LYS184 4.8 121.5 1.0
NZ D:LYS184 4.9 121.5 1.0
CB D:LYS184 4.9 121.5 1.0
C D:GLY183 4.9 120.7 1.0

Magnesium binding site 3 out of 12 in 9gcs

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Magnesium binding site 3 out of 12 in the Rho-Atp-Psu Complex II


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Rho-Atp-Psu Complex II within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg502

b:152.4
occ:1.00
O1B E:ATP501 2.1 156.1 1.0
OG1 E:THR185 2.1 143.5 1.0
O2G E:ATP501 2.1 156.1 1.0
O1A E:ATP501 2.5 156.1 1.0
CG2 E:THR185 2.7 143.5 1.0
PB E:ATP501 2.8 156.1 1.0
CB E:THR185 2.9 143.5 1.0
PA E:ATP501 3.0 156.1 1.0
O3A E:ATP501 3.1 156.1 1.0
O2A E:ATP501 3.1 156.1 1.0
O3B E:ATP501 3.1 156.1 1.0
PG E:ATP501 3.2 156.1 1.0
N E:THR185 3.5 143.5 1.0
CA E:THR185 3.8 143.5 1.0
O3G E:ATP501 3.9 156.1 1.0
NH2 E:ARG212 4.1 151.2 1.0
O2B E:ATP501 4.3 156.1 1.0
O1G E:ATP501 4.4 156.1 1.0
O5' E:ATP501 4.5 156.1 1.0
N E:LYS184 4.5 145.5 1.0
C E:LYS184 4.7 145.5 1.0
OE1 E:GLU215 4.8 146.9 1.0
C E:THR185 4.9 143.5 1.0
N E:MET186 4.9 145.1 1.0
OE2 E:GLU215 5.0 146.9 1.0
C E:GLY183 5.0 139.8 1.0

Magnesium binding site 4 out of 12 in 9gcs

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Magnesium binding site 4 out of 12 in the Rho-Atp-Psu Complex II


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Rho-Atp-Psu Complex II within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Mg502

b:98.8
occ:1.00
OG1 J:THR185 2.1 94.7 1.0
O2G J:ATP501 2.1 97.9 1.0
O1B J:ATP501 2.1 97.9 1.0
CG2 J:THR185 2.3 94.7 1.0
O2A J:ATP501 2.5 97.9 1.0
CB J:THR185 2.6 94.7 1.0
PB J:ATP501 2.9 97.9 1.0
O3B J:ATP501 3.1 97.9 1.0
PG J:ATP501 3.2 97.9 1.0
N J:THR185 3.2 94.7 1.0
PA J:ATP501 3.2 97.9 1.0
O3A J:ATP501 3.3 97.9 1.0
CA J:THR185 3.5 94.7 1.0
O1A J:ATP501 3.6 97.9 1.0
SD J:MET186 4.2 82.4 1.0
CG J:LYS184 4.2 91.1 1.0
O1G J:ATP501 4.2 97.9 1.0
O3G J:ATP501 4.2 97.9 1.0
N J:LYS184 4.3 91.1 1.0
O2B J:ATP501 4.4 97.9 1.0
C J:LYS184 4.4 91.1 1.0
C J:THR185 4.7 94.7 1.0
O5' J:ATP501 4.7 97.9 1.0
N J:MET186 4.8 82.4 1.0
CA J:LYS184 4.8 91.1 1.0
C J:GLY183 4.8 86.6 1.0
CE J:MET186 4.9 82.4 1.0
CA J:GLY183 5.0 86.6 1.0

Magnesium binding site 5 out of 12 in 9gcs

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Magnesium binding site 5 out of 12 in the Rho-Atp-Psu Complex II


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Rho-Atp-Psu Complex II within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Mg502

b:121.3
occ:1.00
OG1 K:THR185 2.1 129.2 1.0
O2G K:ATP501 2.1 140.6 1.0
O1B K:ATP501 2.1 140.6 1.0
O3B K:ATP501 2.8 140.6 1.0
PB K:ATP501 2.8 140.6 1.0
OE2 K:GLU215 3.0 135.4 1.0
PG K:ATP501 3.0 140.6 1.0
CB K:THR185 3.3 129.2 1.0
O1A K:ATP501 3.5 140.6 1.0
O3A K:ATP501 3.5 140.6 1.0
O2A K:ATP501 3.7 140.6 1.0
PA K:ATP501 3.7 140.6 1.0
OE1 K:GLU215 3.8 135.4 1.0
CD K:GLU215 3.8 135.4 1.0
NZ K:LYS184 4.0 122.2 1.0
O1G K:ATP501 4.0 140.6 1.0
N K:THR185 4.0 129.2 1.0
O3G K:ATP501 4.1 140.6 1.0
CA K:THR185 4.2 129.2 1.0
CG2 K:THR185 4.2 129.2 1.0
O2B K:ATP501 4.3 140.6 1.0
CG K:LYS184 4.6 122.2 1.0
NH1 K:ARG212 4.8 122.2 1.0

Magnesium binding site 6 out of 12 in 9gcs

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Magnesium binding site 6 out of 12 in the Rho-Atp-Psu Complex II


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Rho-Atp-Psu Complex II within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg502

b:151.1
occ:1.00
OG1 L:THR185 2.1 138.9 1.0
O2G L:ATP501 2.1 149.9 1.0
O1B L:ATP501 2.1 149.9 1.0
O3B L:ATP501 2.3 149.9 1.0
PB L:ATP501 2.6 149.9 1.0
PG L:ATP501 2.6 149.9 1.0
CB L:THR185 3.2 138.9 1.0
O1G L:ATP501 3.2 149.9 1.0
O3A L:ATP501 3.3 149.9 1.0
O1A L:ATP501 3.5 149.9 1.0
PA L:ATP501 3.9 149.9 1.0
NZ L:LYS184 3.9 138.1 1.0
N L:THR185 3.9 138.9 1.0
O3G L:ATP501 4.0 149.9 1.0
O2B L:ATP501 4.0 149.9 1.0
OE1 L:GLU215 4.1 140.4 1.0
CA L:THR185 4.1 138.9 1.0
NH2 L:ARG212 4.1 135.7 1.0
OE2 L:GLU215 4.2 140.4 1.0
CG2 L:THR185 4.2 138.9 1.0
CG L:LYS184 4.3 138.1 1.0
NH2 M:ARG366 4.4 126.8 1.0
CD L:GLU215 4.4 140.4 1.0
CE L:LYS184 4.5 138.1 1.0
O2A L:ATP501 4.5 149.9 1.0

Magnesium binding site 7 out of 12 in 9gcs

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Magnesium binding site 7 out of 12 in the Rho-Atp-Psu Complex II


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Rho-Atp-Psu Complex II within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Mg502

b:141.1
occ:1.00
OG1 M:THR185 2.1 136.4 1.0
O2G M:ATP501 2.1 155.4 1.0
O1B M:ATP501 2.1 155.4 1.0
PB M:ATP501 2.9 155.4 1.0
O3B M:ATP501 3.0 155.4 1.0
PG M:ATP501 3.1 155.4 1.0
CB M:THR185 3.2 136.4 1.0
O1A M:ATP501 3.5 155.4 1.0
O3A M:ATP501 3.6 155.4 1.0
O2A M:ATP501 3.6 155.4 1.0
PA M:ATP501 3.7 155.4 1.0
OE2 M:GLU215 4.0 142.9 1.0
O1G M:ATP501 4.1 155.4 1.0
CG2 M:THR185 4.1 136.4 1.0
NZ M:LYS184 4.1 136.5 1.0
NH1 N:ARG366 4.2 131.7 1.0
O3G M:ATP501 4.2 155.4 1.0
N M:THR185 4.3 136.4 1.0
CA M:THR185 4.3 136.4 1.0
O2B M:ATP501 4.3 155.4 1.0
OE1 M:GLU215 4.5 142.9 1.0
CD M:GLU215 4.6 142.9 1.0
CG M:LYS184 4.7 136.5 1.0
CE M:LYS184 4.8 136.5 1.0
CZ N:ARG366 4.9 131.7 1.0

Magnesium binding site 8 out of 12 in 9gcs

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Magnesium binding site 8 out of 12 in the Rho-Atp-Psu Complex II


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Rho-Atp-Psu Complex II within 5.0Å range:
probe atom residue distance (Å) B Occ
O:Mg502

b:148.6
occ:1.00
OG1 O:THR185 2.1 128.1 1.0
O2G O:ATP501 2.1 148.4 1.0
O1B O:ATP501 2.1 148.4 1.0
O2A O:ATP501 2.3 148.4 1.0
CB O:THR185 2.9 128.1 1.0
PB O:ATP501 2.9 148.4 1.0
O3B O:ATP501 3.1 148.4 1.0
PG O:ATP501 3.2 148.4 1.0
PA O:ATP501 3.3 148.4 1.0
O3A O:ATP501 3.3 148.4 1.0
N O:THR185 3.6 128.1 1.0
CA O:THR185 3.8 128.1 1.0
O1A O:ATP501 4.0 148.4 1.0
CG2 O:THR185 4.0 128.1 1.0
O3G O:ATP501 4.2 148.4 1.0
O1G O:ATP501 4.2 148.4 1.0
O2B O:ATP501 4.3 148.4 1.0
SD O:MET186 4.6 125.2 1.0
O5' O:ATP501 4.6 148.4 1.0
N O:LYS184 4.7 133.9 1.0
C O:LYS184 4.8 133.9 1.0
CE O:MET186 4.9 125.2 1.0

Magnesium binding site 9 out of 12 in 9gcs

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Magnesium binding site 9 out of 12 in the Rho-Atp-Psu Complex II


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Rho-Atp-Psu Complex II within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg502

b:71.4
occ:1.00
OG1 B:THR185 2.1 101.4 1.0
O1B B:ATP501 2.1 158.8 1.0
O2G B:ATP501 2.1 158.8 1.0
PB B:ATP501 2.9 158.8 1.0
O1A B:ATP501 3.1 158.8 1.0
O3B B:ATP501 3.1 158.8 1.0
PG B:ATP501 3.2 158.8 1.0
O3A B:ATP501 3.2 158.8 1.0
CB B:THR185 3.4 101.4 1.0
PA B:ATP501 3.7 158.8 1.0
O3G B:ATP501 4.1 158.8 1.0
CG2 B:THR185 4.2 101.4 1.0
O1G B:ATP501 4.3 158.8 1.0
O2A B:ATP501 4.3 158.8 1.0
NH2 C:ARG366 4.3 147.8 1.0
O2B B:ATP501 4.3 158.8 1.0
N B:THR185 4.4 101.4 1.0
CA B:THR185 4.4 101.4 1.0
CZ C:ARG366 4.7 147.8 1.0
NE C:ARG366 4.8 147.8 1.0
CG B:LYS184 4.9 102.5 1.0
NH2 B:ARG212 5.0 106.5 1.0

Magnesium binding site 10 out of 12 in 9gcs

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Magnesium binding site 10 out of 12 in the Rho-Atp-Psu Complex II


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Rho-Atp-Psu Complex II within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Mg502

b:139.9
occ:1.00
OG1 G:THR185 2.1 83.1 1.0
O2G G:ATP501 2.1 161.8 1.0
O1B G:ATP501 2.1 161.8 1.0
OE2 G:GLU211 2.3 86.7 1.0
O3B G:ATP501 2.7 161.8 1.0
PG G:ATP501 2.8 161.8 1.0
PB G:ATP501 2.8 161.8 1.0
O1G G:ATP501 3.3 161.8 1.0
CB G:THR185 3.4 83.1 1.0
O3A G:ATP501 3.4 161.8 1.0
CD G:GLU211 3.5 86.7 1.0
O1A G:ATP501 3.8 161.8 1.0
N G:THR185 3.9 83.1 1.0
OE1 G:GLU211 4.1 86.7 1.0
PA G:ATP501 4.1 161.8 1.0
O3G G:ATP501 4.2 161.8 1.0
CA G:THR185 4.2 83.1 1.0
O2B G:ATP501 4.2 161.8 1.0
OD2 G:ASP265 4.3 130.4 1.0
CG2 G:THR185 4.4 83.1 1.0
CE G:LYS184 4.5 78.6 1.0
O2A G:ATP501 4.5 161.8 1.0
CG G:GLU211 4.5 86.7 1.0
NZ G:LYS184 4.6 78.6 1.0
CB G:LYS184 4.8 78.6 1.0
C G:LYS184 4.9 78.6 1.0

Reference:

D.Gjorgjevikj, M.C.Wahl, T.Hilal, B.Loll. Rho-Atp-Psu Complex II To Be Published.
Page generated: Thu Oct 31 22:33:35 2024

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