Magnesium in PDB 9gnq: Microtubule-Associated KIF5B Iak Tail Mutant Bound to Adp

The binding sites of Magnesium atom in the Microtubule-Associated KIF5B Iak Tail Mutant Bound to Adp (pdb code 9gnq). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Microtubule-Associated KIF5B Iak Tail Mutant Bound to Adp, PDB code: 9gnq:

Magnesium binding site 1 out of 1 in the Microtubule-Associated KIF5B Iak Tail Mutant Bound to Adp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Microtubule-Associated KIF5B Iak Tail Mutant Bound to Adp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:42.5 occ:1.00 O3G A:GTP501 2.1 60.3 1.0 O1B A:GTP501 2.8 56.0 1.0 OE1 A:GLU71 3.0 69.3 1.0 PG A:GTP501 3.4 55.1 1.0 O2G A:GTP501 3.8 57.3 1.0 PB A:GTP501 3.9 47.0 1.0 NZ B:LYS254 4.0 47.5 1.0 O3B A:GTP501 4.1 47.9 1.0 OE1 A:GLN11 4.2 53.0 1.0 CD A:GLU71 4.3 68.2 1.0 O3A A:GTP501 4.3 52.4 1.0 CB A:GLN11 4.4 46.5 1.0 O1G A:GTP501 4.5 55.7 1.0 OD2 A:ASP69 4.7 63.7 1.0 OD1 A:ASP69 4.8 59.7 1.0 O1A A:GTP501 4.8 54.3 1.0 O B:ASN249 4.8 55.6 1.0 CB A:GLU71 4.8 59.7 1.0 CD A:GLN11 4.8 49.4 1.0 CB B:ASN249 4.9 47.4 1.0 CB A:ASP98 4.9 60.3 1.0

J.Atherton, M.S.Chegkazi, E.Peirano, L.S.Pozzer, T.Foran, R.A.Steiner. Microtubule Association Induces A Mg-Free Apo-Like Adp Pre-Release Conformation in Kinesin-1 That Is Unaffected By Its Autoinhibitory Tail Biorxiv 2024.
ISSN: ISSN 2692-8205
DOI: 10.1101/2024.11.11.622991