Magnesium in PDB 9gob: Structure of the F-Tractin-F-Actin Complex

All present enzymatic activity of Structure of the F-Tractin-F-Actin Complex:
2.7.1.127;

The binding sites of Magnesium atom in the Structure of the F-Tractin-F-Actin Complex (pdb code 9gob). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the Structure of the F-Tractin-F-Actin Complex, PDB code: 9gob:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in the Structure of the F-Tractin-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the F-Tractin-F-Actin Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg402 b:80.9 occ:1.00 O1B C:ADP401 2.0 93.2 1.0 PB C:ADP401 2.7 92.8 1.0 O2B C:ADP401 2.9 87.9 1.0 NE2 C:GLN137 3.0 80.8 1.0 O3B C:ADP401 3.5 83.0 1.0 CD C:GLN137 3.5 83.0 1.0 OE1 C:GLN137 3.7 89.8 1.0 OD2 C:ASP154 3.9 89.7 1.0 OD2 C:ASP11 4.0 74.4 1.0 O1A C:ADP401 4.1 87.4 1.0 OD1 C:ASP154 4.1 86.8 1.0 O3A C:ADP401 4.1 70.6 1.0 CG2 C:VAL339 4.4 66.0 1.0 CG C:ASP154 4.5 84.4 1.0 OD1 C:ASP11 4.5 74.4 1.0 CG C:GLN137 4.7 75.0 1.0 NZ C:LYS18 4.7 76.4 1.0 CG C:ASP11 4.7 72.4 1.0 CA C:GLY13 4.7 76.9 1.0 CB C:VAL339 4.7 63.1 1.0 PA C:ADP401 4.8 80.5 1.0 CA C:GLY156 4.8 78.9 1.0 CG1 C:VAL339 4.9 62.1 1.0

Magnesium binding site 2 out of 5 in the Structure of the F-Tractin-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of the F-Tractin-F-Actin Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:114.2 occ:1.00 O1B A:ADP401 2.0 124.4 1.0 O2B A:ADP401 2.3 130.6 1.0 PB A:ADP401 2.4 137.2 1.0 NE2 A:GLN137 3.2 118.7 1.0 O3B A:ADP401 3.3 129.3 1.0 OD2 A:ASP11 3.6 120.8 1.0 O1A A:ADP401 3.8 121.3 1.0 O3A A:ADP401 3.8 119.3 1.0 CD A:GLN137 3.9 113.0 1.0 OE1 A:GLN137 4.1 116.0 1.0 NZ A:LYS18 4.2 123.5 1.0 OD1 A:ASP11 4.3 119.3 1.0 CG A:ASP11 4.4 121.1 1.0 PA A:ADP401 4.4 122.0 1.0 OD2 A:ASP154 4.4 113.5 1.0 OD1 A:ASP154 4.5 112.6 1.0 CA A:GLY13 4.5 123.3 1.0 CG2 A:VAL339 4.5 98.9 1.0 CB A:VAL339 4.7 97.2 1.0 CE A:LYS18 4.7 115.5 1.0 CG1 A:VAL339 4.8 100.3 1.0 CG A:ASP154 4.9 108.9 1.0 CG A:GLN137 4.9 103.6 1.0

Magnesium binding site 3 out of 5 in the Structure of the F-Tractin-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Structure of the F-Tractin-F-Actin Complex within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg402 b:74.2 occ:1.00 O1B E:ADP401 1.9 95.7 1.0 PB E:ADP401 2.9 98.6 1.0 O2B E:ADP401 3.1 91.1 1.0 NE2 E:GLN137 3.2 83.4 1.0 OD2 E:ASP154 3.6 84.9 1.0 CD E:GLN137 3.6 81.8 1.0 OD1 E:ASP154 3.6 83.7 1.0 OE1 E:GLN137 3.7 88.9 1.0 O3B E:ADP401 3.7 84.0 1.0 CG E:ASP154 4.0 81.1 1.0 O1A E:ADP401 4.0 83.8 1.0 O3A E:ADP401 4.2 71.7 1.0 CG2 E:VAL339 4.3 69.4 1.0 OD2 E:ASP11 4.3 78.3 1.0 CA E:GLY156 4.6 71.3 1.0 CG E:GLN137 4.7 67.6 1.0 CB E:VAL339 4.8 60.6 1.0 PA E:ADP401 4.8 74.9 1.0 OD1 E:ASP11 4.9 81.8 1.0 CG1 E:VAL339 5.0 58.3 1.0

Magnesium binding site 4 out of 5 in the Structure of the F-Tractin-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Structure of the F-Tractin-F-Actin Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg402 b:87.8 occ:1.00 O1B B:ADP401 2.0 98.3 1.0 PB B:ADP401 2.6 101.9 1.0 O2B B:ADP401 2.6 100.5 1.0 NE2 B:GLN137 2.9 89.9 1.0 O3B B:ADP401 3.4 89.6 1.0 CD B:GLN137 3.5 88.0 1.0 OE1 B:GLN137 3.7 92.0 1.0 OD2 B:ASP11 3.8 90.9 1.0 O1A B:ADP401 4.0 85.0 1.0 OD2 B:ASP154 4.0 90.9 1.0 O3A B:ADP401 4.0 79.9 1.0 OD1 B:ASP154 4.2 89.1 1.0 OD1 B:ASP11 4.4 89.9 1.0 CG2 B:VAL339 4.5 70.5 1.0 NZ B:LYS18 4.5 87.6 1.0 CG B:ASP11 4.5 88.4 1.0 CG B:ASP154 4.6 86.1 1.0 PA B:ADP401 4.6 83.2 1.0 CG B:GLN137 4.6 78.7 1.0 CA B:GLY13 4.7 88.2 1.0 CB B:VAL339 4.7 66.1 1.0 CG1 B:VAL339 4.8 69.5 1.0 CA B:GLY156 4.9 78.2 1.0

Magnesium binding site 5 out of 5 in the Structure of the F-Tractin-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Structure of the F-Tractin-F-Actin Complex within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg402 b:64.3 occ:1.00 O1B D:ADP401 2.0 97.7 1.0 PB D:ADP401 3.0 100.9 1.0 O2B D:ADP401 3.0 87.9 1.0 O1A D:ADP401 3.4 91.2 1.0 OD1 D:ASP154 3.5 84.5 1.0 NE2 D:GLN137 3.7 83.8 1.0 OD2 D:ASP154 3.8 88.3 1.0 CG D:ASP154 4.0 83.0 1.0 CG2 D:VAL339 4.0 69.1 1.0 O3B D:ADP401 4.1 86.1 1.0 O3A D:ADP401 4.1 74.9 1.0 CD D:GLN137 4.1 87.9 1.0 OE1 D:GLN137 4.3 96.3 1.0 OD2 D:ASP11 4.3 75.7 1.0 PA D:ADP401 4.4 85.5 1.0 CB D:VAL339 4.5 60.6 1.0 CA D:GLY301 4.5 66.2 1.0 CA D:GLY156 4.7 72.5 1.0 CG1 D:VAL339 4.9 58.5 1.0 NZ D:LYS18 4.9 78.1 1.0

D.Shatskiy, A.Sivan, R.Wedlich-Soeldner, A.Belyy. Structure of the F-Tractin-F-Actin Complex To Be Published.