Magnesium in PDB 9jp7: 4,5-Dihydroxyphthalate Decarboxylase From Comamonas Testosteroni (Strain Dsm 14576 / Kf-1)

Enzymatic activity of 4,5-Dihydroxyphthalate Decarboxylase From Comamonas Testosteroni (Strain Dsm 14576 / Kf-1)

All present enzymatic activity of 4,5-Dihydroxyphthalate Decarboxylase From Comamonas Testosteroni (Strain Dsm 14576 / Kf-1):
4.1.1.55;

Protein crystallography data

The structure of 4,5-Dihydroxyphthalate Decarboxylase From Comamonas Testosteroni (Strain Dsm 14576 / Kf-1), PDB code: 9jp7 was solved by K.A.Kumar, P.Kumar, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.22 / 3.05
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 128.045, 270.201, 113.627, 90, 90, 90
R / Rfree (%) 26.4 / 33.5

Other elements in 9jp7:

The structure of 4,5-Dihydroxyphthalate Decarboxylase From Comamonas Testosteroni (Strain Dsm 14576 / Kf-1) also contains other interesting chemical elements:

Zinc (Zn) 3 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the 4,5-Dihydroxyphthalate Decarboxylase From Comamonas Testosteroni (Strain Dsm 14576 / Kf-1) (pdb code 9jp7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the 4,5-Dihydroxyphthalate Decarboxylase From Comamonas Testosteroni (Strain Dsm 14576 / Kf-1), PDB code: 9jp7:

Magnesium binding site 1 out of 1 in 9jp7

Go back to Magnesium Binding Sites List in 9jp7
Magnesium binding site 1 out of 1 in the 4,5-Dihydroxyphthalate Decarboxylase From Comamonas Testosteroni (Strain Dsm 14576 / Kf-1)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of 4,5-Dihydroxyphthalate Decarboxylase From Comamonas Testosteroni (Strain Dsm 14576 / Kf-1) within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg401

b:34.0
occ:1.00
 N D:ALA115 3.8 49.0 1.0
CB D:THR114 3.8 46.9 1.0
NE2 D:HIS222 3.8 47.3 1.0
N D:THR114 3.9 50.1 1.0
OG1 D:THR114 4.1 45.1 1.0
CA D:THR114 4.2 48.3 1.0
CB D:ALA115 4.4 54.2 1.0
CD2 D:HIS222 4.4 44.6 1.0
C D:THR114 4.5 48.0 1.0
CB D:PRO184 4.5 48.2 1.0
CB D:MET221 4.6 45.8 1.0
SD D:MET221 4.6 45.2 1.0
CA D:ALA115 4.7 52.8 1.0
CG D:MET221 4.8 42.2 1.0
C D:LEU113 4.9 54.2 1.0
CE1 D:HIS222 4.9 44.0 1.0
CG D:PRO184 5.0 49.3 1.0

Reference:

K.A.Kumar, K.A.Kumar, P.Kumar. N/A N/A.
Page generated: Wed Nov 13 12:51:21 2024

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