Atomistry » Magnesium » PDB 9fp2-9rub » 9jp7
Atomistry »
  Magnesium »
    PDB 9fp2-9rub »
      9jp7 »

Magnesium in PDB 9jp7: 4,5-Dihydroxyphthalate Decarboxylase From Comamonas Testosteroni (Strain Dsm 14576 / Kf-1)

Enzymatic activity of 4,5-Dihydroxyphthalate Decarboxylase From Comamonas Testosteroni (Strain Dsm 14576 / Kf-1)

All present enzymatic activity of 4,5-Dihydroxyphthalate Decarboxylase From Comamonas Testosteroni (Strain Dsm 14576 / Kf-1):
4.1.1.55;

Protein crystallography data

The structure of 4,5-Dihydroxyphthalate Decarboxylase From Comamonas Testosteroni (Strain Dsm 14576 / Kf-1), PDB code: 9jp7 was solved by K.A.Kumar, P.Kumar, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.22 / 3.05
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 128.045, 270.201, 113.627, 90, 90, 90
R / Rfree (%) 26.4 / 33.5

Other elements in 9jp7:

The structure of 4,5-Dihydroxyphthalate Decarboxylase From Comamonas Testosteroni (Strain Dsm 14576 / Kf-1) also contains other interesting chemical elements:

Zinc (Zn) 3 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the 4,5-Dihydroxyphthalate Decarboxylase From Comamonas Testosteroni (Strain Dsm 14576 / Kf-1) (pdb code 9jp7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the 4,5-Dihydroxyphthalate Decarboxylase From Comamonas Testosteroni (Strain Dsm 14576 / Kf-1), PDB code: 9jp7:

Magnesium binding site 1 out of 1 in 9jp7

Go back to Magnesium Binding Sites List in 9jp7
Magnesium binding site 1 out of 1 in the 4,5-Dihydroxyphthalate Decarboxylase From Comamonas Testosteroni (Strain Dsm 14576 / Kf-1)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of 4,5-Dihydroxyphthalate Decarboxylase From Comamonas Testosteroni (Strain Dsm 14576 / Kf-1) within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg401

b:34.0
occ:1.00
N D:ALA115 3.8 49.0 1.0
CB D:THR114 3.8 46.9 1.0
NE2 D:HIS222 3.8 47.3 1.0
N D:THR114 3.9 50.1 1.0
OG1 D:THR114 4.1 45.1 1.0
CA D:THR114 4.2 48.3 1.0
CB D:ALA115 4.4 54.2 1.0
CD2 D:HIS222 4.4 44.6 1.0
C D:THR114 4.5 48.0 1.0
CB D:PRO184 4.5 48.2 1.0
CB D:MET221 4.6 45.8 1.0
SD D:MET221 4.6 45.2 1.0
CA D:ALA115 4.7 52.8 1.0
CG D:MET221 4.8 42.2 1.0
C D:LEU113 4.9 54.2 1.0
CE1 D:HIS222 4.9 44.0 1.0
CG D:PRO184 5.0 49.3 1.0

Reference:

K.A.Kumar, K.A.Kumar, P.Kumar. N/A N/A.
Page generated: Wed Nov 13 12:51:21 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy