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Magnesium in PDB 9noo: Cct G Beta 5 S123L Complex State 2

Other elements in 9noo:

The structure of Cct G Beta 5 S123L Complex State 2 also contains other interesting chemical elements:

Fluorine (F) 48 atoms
Aluminium (Al) 16 atoms

Magnesium Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 16;

Binding sites:

The binding sites of Magnesium atom in the Cct G Beta 5 S123L Complex State 2 (pdb code 9noo). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 16 binding sites of Magnesium where determined in the Cct G Beta 5 S123L Complex State 2, PDB code: 9noo:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 16 in 9noo

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Magnesium binding site 1 out of 16 in the Cct G Beta 5 S123L Complex State 2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cct G Beta 5 S123L Complex State 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg602

b:116.9
occ:1.00
O3A A:ADP601 2.0 127.1 1.0
F1 A:AF3603 2.1 145.6 1.0
OD1 A:ASP88 2.1 137.3 1.0
O3B A:ADP601 2.5 131.0 1.0
PB A:ADP601 2.7 132.1 1.0
O2A A:ADP601 3.0 124.7 1.0
CG A:ASP88 3.0 134.1 1.0
PA A:ADP601 3.1 126.0 1.0
O2B A:ADP601 3.2 126.5 1.0
OD2 A:ASP88 3.3 134.0 1.0
AL A:AF3603 3.5 150.0 1.0
NZ A:LYS159 3.8 120.4 1.0
O5' A:ADP601 4.0 127.9 1.0
O1B A:ADP601 4.0 124.0 1.0
N A:GLY89 4.1 133.3 1.0
O1A A:ADP601 4.2 122.9 1.0
F3 A:AF3603 4.4 140.5 1.0
CB A:ASP88 4.4 126.0 1.0
O A:SER155 4.4 127.5 1.0
CA A:ASP88 4.7 125.9 1.0
F2 A:AF3603 4.7 150.8 1.0
C A:ASP88 4.9 130.3 1.0
CA A:GLY89 5.0 131.2 1.0
OD2 A:ASP394 5.0 135.1 1.0

Magnesium binding site 2 out of 16 in 9noo

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Magnesium binding site 2 out of 16 in the Cct G Beta 5 S123L Complex State 2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cct G Beta 5 S123L Complex State 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg602

b:174.5
occ:1.00
O3A B:ADP601 2.0 129.6 1.0
OD1 B:ASP97 2.0 137.1 1.0
O2A B:ADP601 2.0 136.3 1.0
F1 B:AF3603 2.1 141.4 1.0
PA B:ADP601 2.5 138.1 1.0
CG B:ASP97 3.0 136.6 1.0
OD2 B:ASP97 3.4 137.2 1.0
PB B:ADP601 3.4 114.4 1.0
O5' B:ADP601 3.5 129.2 1.0
O B:THR166 3.6 100.0 1.0
O1A B:ADP601 3.7 112.8 1.0
AL B:AF3603 3.7 140.0 1.0
O2B B:ADP601 3.7 129.2 1.0
CE B:LYS170 4.0 117.1 1.0
O3B B:ADP601 4.0 119.7 1.0
F3 B:AF3603 4.3 140.4 1.0
CB B:ASP97 4.3 128.5 1.0
CG2 B:THR166 4.3 100.9 1.0
O1B B:ADP601 4.4 114.8 1.0
C B:THR166 4.5 100.5 1.0
CA B:THR166 4.5 95.6 1.0
NZ B:LYS170 4.6 121.0 1.0
C5' B:ADP601 4.7 123.4 1.0
CB B:SER169 4.9 115.6 1.0
OD2 B:ASP392 4.9 136.7 1.0

Magnesium binding site 3 out of 16 in 9noo

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Magnesium binding site 3 out of 16 in the Cct G Beta 5 S123L Complex State 2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Cct G Beta 5 S123L Complex State 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg602

b:133.0
occ:1.00
O3A D:ADP601 2.0 132.0 1.0
F2 D:AF3603 2.0 130.6 1.0
OD1 D:ASP104 2.1 139.1 1.0
O2A D:ADP601 2.5 134.8 1.0
OD2 D:ASP104 2.5 135.0 1.0
CG D:ASP104 2.6 136.9 1.0
PA D:ADP601 2.7 140.4 1.0
PB D:ADP601 3.3 130.6 1.0
O5' D:ADP601 3.4 128.4 1.0
O3B D:ADP601 3.6 130.1 1.0
O2B D:ADP601 3.6 119.3 1.0
AL D:AF3603 3.7 126.4 1.0
NZ D:LYS174 3.9 120.5 1.0
O1A D:ADP601 4.1 117.1 1.0
CB D:ASP104 4.1 129.5 1.0
O D:SER170 4.2 110.8 1.0
N D:GLY105 4.4 117.1 1.0
OG D:SER173 4.4 128.2 1.0
O1B D:ADP601 4.4 124.3 1.0
OG D:SER170 4.5 124.3 1.0
CA D:SER170 4.6 111.5 1.0
C5' D:ADP601 4.7 122.7 1.0
F1 D:AF3603 4.7 124.1 1.0
CA D:ASP104 4.8 127.0 1.0
C D:SER170 4.9 112.0 1.0
F3 D:AF3603 4.9 135.0 1.0

Magnesium binding site 4 out of 16 in 9noo

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Magnesium binding site 4 out of 16 in the Cct G Beta 5 S123L Complex State 2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Cct G Beta 5 S123L Complex State 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg602

b:141.7
occ:1.00
O3A E:ADP601 2.0 122.3 1.0
OD1 E:ASP104 2.0 139.3 1.0
F1 E:AF3603 2.0 124.6 1.0
O2A E:ADP601 2.5 136.8 1.0
PA E:ADP601 2.7 136.6 1.0
CG E:ASP104 2.9 140.2 1.0
OD2 E:ASP104 3.1 144.0 1.0
PB E:ADP601 3.3 122.6 1.0
O5' E:ADP601 3.4 125.4 1.0
O2B E:ADP601 3.6 114.3 1.0
O3B E:ADP601 3.6 118.8 1.0
AL E:AF3603 3.7 118.2 1.0
O E:THR172 4.0 110.0 1.0
O1A E:ADP601 4.1 106.2 1.0
CB E:ASP104 4.3 131.1 1.0
N E:GLY105 4.3 119.8 1.0
O1B E:ADP601 4.4 122.2 1.0
OG E:SER175 4.5 115.4 1.0
CG2 E:THR172 4.5 103.4 1.0
NZ E:LYS176 4.5 111.0 1.0
F3 E:AF3603 4.6 119.1 1.0
C5' E:ADP601 4.7 118.0 1.0
CA E:THR172 4.8 110.1 1.0
C E:THR172 4.8 109.0 1.0
CA E:ASP104 4.9 128.8 1.0
F2 E:AF3603 5.0 127.5 1.0

Magnesium binding site 5 out of 16 in 9noo

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Magnesium binding site 5 out of 16 in the Cct G Beta 5 S123L Complex State 2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Cct G Beta 5 S123L Complex State 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Mg602

b:131.7
occ:1.00
F2 G:AF3603 2.0 148.9 1.0
O2A G:ADP601 2.1 130.9 1.0
O3B G:ADP601 2.2 127.7 1.0
PB G:ADP601 3.4 121.7 1.0
OD1 G:ASP93 3.4 140.9 1.0
PA G:ADP601 3.4 127.8 1.0
AL G:AF3603 3.7 158.6 1.0
CB G:ASP93 3.7 136.7 1.0
O2B G:ADP601 3.7 117.7 1.0
O3A G:ADP601 3.8 125.8 1.0
CG G:ASP93 4.0 142.2 1.0
O G:SER159 4.1 112.8 1.0
C5' G:ADP601 4.2 124.3 1.0
N G:GLY94 4.3 128.1 1.0
OG1 G:THR162 4.3 127.4 1.0
O5' G:ADP601 4.4 127.4 1.0
O1A G:ADP601 4.5 124.8 1.0
O1B G:ADP601 4.7 129.4 1.0
F3 G:AF3603 4.8 163.3 1.0
CA G:ASP93 4.8 136.1 1.0
F1 G:AF3603 4.9 150.9 1.0

Magnesium binding site 6 out of 16 in 9noo

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Magnesium binding site 6 out of 16 in the Cct G Beta 5 S123L Complex State 2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Cct G Beta 5 S123L Complex State 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Mg602

b:141.6
occ:1.00
O3A H:ADP601 2.0 127.6 1.0
F2 H:AF3603 2.0 128.0 1.0
OD1 H:ASP92 2.0 132.5 1.0
O2A H:ADP601 2.5 127.9 1.0
OD2 H:ASP92 2.6 130.6 1.0
CG H:ASP92 2.7 131.2 1.0
PA H:ADP601 2.8 129.9 1.0
PB H:ADP601 3.4 128.4 1.0
AL H:AF3603 3.6 123.6 1.0
O2B H:ADP601 3.7 125.0 1.0
C5' H:ADP601 3.7 117.7 1.0
O5' H:ADP601 3.7 112.1 1.0
O3B H:ADP601 3.8 116.3 1.0
O1A H:ADP601 4.0 119.0 1.0
CB H:ASP92 4.1 123.8 1.0
O H:ALA162 4.2 111.5 1.0
NZ H:LYS166 4.3 113.4 1.0
N H:GLY93 4.4 107.3 1.0
F1 H:AF3603 4.4 121.6 1.0
O1B H:ADP601 4.5 123.7 1.0
CA H:ALA162 4.8 107.5 1.0
CA H:ASP92 4.8 121.2 1.0
F3 H:AF3603 4.9 121.9 1.0
C H:ALA162 5.0 109.9 1.0

Magnesium binding site 7 out of 16 in 9noo

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Magnesium binding site 7 out of 16 in the Cct G Beta 5 S123L Complex State 2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Cct G Beta 5 S123L Complex State 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
Q:Mg602

b:158.2
occ:1.00
O2A Q:ADP601 1.9 126.3 1.0
OD1 Q:ASP99 2.0 135.8 1.0
O2B Q:ADP601 2.0 126.7 1.0
OD2 Q:ASP99 2.1 131.9 1.0
CG Q:ASP99 2.2 132.3 1.0
O3B Q:ADP601 2.3 132.1 1.0
NZ Q:LYS171 2.5 129.5 1.0
PB Q:ADP601 2.5 129.8 1.0
PA Q:ADP601 3.1 130.2 1.0
O3A Q:ADP601 3.3 124.5 1.0
CB Q:ASP99 3.7 126.2 1.0
CE Q:LYS171 3.9 128.6 1.0
O1B Q:ADP601 3.9 125.3 1.0
N Q:GLY100 4.0 119.4 1.0
F1 Q:AF3603 4.1 147.3 1.0
AL Q:AF3603 4.1 149.0 1.0
F2 Q:AF3603 4.1 135.6 1.0
C5' Q:ADP601 4.1 123.9 1.0
O5' Q:ADP601 4.2 126.1 1.0
O1A Q:ADP601 4.2 126.9 1.0
CA Q:ASP99 4.2 125.6 1.0
C Q:ASP99 4.4 126.6 1.0
OG Q:SER170 4.6 126.5 1.0
F3 Q:AF3603 4.6 152.4 1.0
CB Q:SER170 4.6 123.2 1.0
OD2 Q:ASP394 4.7 128.5 1.0
CA Q:GLY100 4.8 117.6 1.0
CD Q:LYS171 4.8 124.6 1.0

Magnesium binding site 8 out of 16 in 9noo

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Magnesium binding site 8 out of 16 in the Cct G Beta 5 S123L Complex State 2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Cct G Beta 5 S123L Complex State 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
Z:Mg602

b:137.5
occ:1.00
O2A Z:ADP601 2.0 135.3 1.0
O2B Z:ADP601 2.0 128.1 1.0
OD1 Z:ASP90 2.0 150.5 1.0
CG Z:ASP90 2.8 149.8 1.0
PB Z:ADP601 2.8 134.8 1.0
O3B Z:ADP601 2.9 131.9 1.0
OD2 Z:ASP90 2.9 149.4 1.0
NZ Z:LYS159 3.0 133.4 1.0
PA Z:ADP601 3.2 135.5 1.0
F1 Z:AF3603 3.2 148.5 1.0
CE Z:LYS159 3.3 136.5 1.0
O3A Z:ADP601 3.4 131.0 1.0
AL Z:AF3603 3.7 155.6 1.0
O1A Z:ADP601 4.0 134.0 1.0
OG1 Z:THR158 4.2 142.4 1.0
O1B Z:ADP601 4.2 135.3 1.0
CB Z:ASP90 4.2 147.1 1.0
F3 Z:AF3603 4.2 152.4 1.0
F2 Z:AF3603 4.2 158.6 1.0
N Z:GLY91 4.3 140.8 1.0
O5' Z:ADP601 4.4 131.2 1.0
C5' Z:ADP601 4.5 131.1 1.0
CA Z:ASP90 4.7 144.6 1.0
CD Z:LYS159 4.8 136.2 1.0

Magnesium binding site 9 out of 16 in 9noo

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Magnesium binding site 9 out of 16 in the Cct G Beta 5 S123L Complex State 2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Cct G Beta 5 S123L Complex State 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Mg602

b:110.7
occ:1.00
O3A a:ADP601 2.0 127.9 1.0
OD1 a:ASP88 2.3 137.1 1.0
O1B a:ADP601 2.6 129.5 1.0
F1 a:AF3603 2.7 142.8 1.0
PB a:ADP601 2.9 129.6 1.0
CG a:ASP88 3.1 134.4 1.0
PA a:ADP601 3.2 129.3 1.0
OD2 a:ASP88 3.3 136.1 1.0
O1A a:ADP601 3.4 127.2 1.0
O2B a:ADP601 3.8 126.8 1.0
O5' a:ADP601 3.8 125.3 1.0
AL a:AF3603 4.0 141.0 1.0
O3B a:ADP601 4.0 116.6 1.0
O a:SER155 4.1 121.1 1.0
N a:GLY89 4.2 131.2 1.0
NZ a:LYS159 4.3 121.6 1.0
O2A a:ADP601 4.4 124.7 1.0
CB a:ASP88 4.5 129.7 1.0
CA a:SER155 4.9 111.0 1.0
CA a:ASP88 4.9 130.3 1.0
OD2 a:ASP394 4.9 130.8 1.0
C a:SER155 4.9 115.5 1.0
F2 a:AF3603 5.0 144.9 1.0

Magnesium binding site 10 out of 16 in 9noo

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Magnesium binding site 10 out of 16 in the Cct G Beta 5 S123L Complex State 2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Cct G Beta 5 S123L Complex State 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
b:Mg602

b:162.4
occ:1.00
OD1 b:ASP97 2.0 135.2 1.0
O3A b:ADP601 2.0 135.2 1.0
O1A b:ADP601 2.0 140.5 1.0
F1 b:AF3603 2.0 134.8 1.0
PA b:ADP601 2.5 133.2 1.0
CG b:ASP97 3.0 134.3 1.0
OD2 b:ASP97 3.3 136.2 1.0
O5' b:ADP601 3.4 118.1 1.0
PB b:ADP601 3.4 131.3 1.0
AL b:AF3603 3.5 134.9 1.0
O b:THR166 3.7 107.0 1.0
O2A b:ADP601 3.7 115.1 1.0
O2B b:ADP601 3.8 127.1 1.0
O1B b:ADP601 3.9 128.5 1.0
F3 b:AF3603 4.1 137.6 1.0
CE b:LYS170 4.2 122.7 1.0
CB b:ASP97 4.3 127.7 1.0
CG2 b:THR166 4.4 103.5 1.0
O3B b:ADP601 4.4 122.3 1.0
CA b:THR166 4.5 104.2 1.0
C b:THR166 4.5 107.0 1.0
C5' b:ADP601 4.7 120.6 1.0
NZ b:LYS170 4.8 124.7 1.0
CB b:SER169 4.9 125.7 1.0

Reference:

M.Sass, D.C.Mack, P.S.Shen, B.M.Willardson. Disease-Causing Mutations in the G Protein Beta 5 Beta-Propeller Disrupt Its Chaperonin-Mediated Folding Trajectory To Be Published.
Page generated: Mon Oct 5 07:41:49 2026

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