Atomistry » Magnesium » PDB 9vm1-9w2v » 9w28
Atomistry »
  Magnesium »
    PDB 9vm1-9w2v »
      9w28 »

Magnesium in PDB 9w28: Structure of AU3+ Bound to Human Heavy Chain Ferritin Nanocage.

Enzymatic activity of Structure of AU3+ Bound to Human Heavy Chain Ferritin Nanocage.

All present enzymatic activity of Structure of AU3+ Bound to Human Heavy Chain Ferritin Nanocage.:
1.16.3.1;

Protein crystallography data

The structure of Structure of AU3+ Bound to Human Heavy Chain Ferritin Nanocage., PDB code: 9w28 was solved by Y.Liu, M.Zhao, T.Qi, X.Huang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.11 / 1.52
Space group F 4 3 2
Cell size a, b, c (Å), α, β, γ (°) 183.843, 183.843, 183.843, 90, 90, 90
R / Rfree (%) 20.5 / 21.5

Other elements in 9w28:

The structure of Structure of AU3+ Bound to Human Heavy Chain Ferritin Nanocage. also contains other interesting chemical elements:

Sodium (Na) 1 atom
Gold (Au) 4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of AU3+ Bound to Human Heavy Chain Ferritin Nanocage. (pdb code 9w28). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of AU3+ Bound to Human Heavy Chain Ferritin Nanocage., PDB code: 9w28:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 9w28

Go back to Magnesium Binding Sites List in 9w28
Magnesium binding site 1 out of 2 in the Structure of AU3+ Bound to Human Heavy Chain Ferritin Nanocage.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of AU3+ Bound to Human Heavy Chain Ferritin Nanocage. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg205

b:13.5
occ:1.00
O A:HOH310 2.0 20.5 1.0
OE1 A:GLU62 2.0 16.7 1.0
OE1 A:GLU27 2.0 22.9 1.0
O A:HOH309 2.0 17.5 1.0
ND1 A:HIS65 2.1 17.6 1.0
CE1 A:HIS65 3.0 18.1 1.0
CD A:GLU62 3.0 17.2 1.0
CD A:GLU27 3.0 15.7 1.0
CG A:HIS65 3.2 17.6 1.0
OE2 A:GLU62 3.4 17.0 1.0
OE2 A:GLU27 3.4 18.2 1.0
CB A:HIS65 3.6 17.6 1.0
NE2 A:GLN141 4.1 19.7 1.0
NE2 A:HIS65 4.2 19.6 1.0
CD2 A:HIS65 4.3 19.1 1.0
CG1 A:VAL110 4.3 16.9 1.0
CG A:GLU62 4.4 16.8 1.0
CG A:GLU27 4.4 14.6 1.0
CA A:GLU62 4.6 16.9 1.0
CB A:GLU62 4.7 16.9 1.0
CB A:GLU27 4.7 12.6 1.0
CD A:GLN141 5.0 17.7 1.0

Magnesium binding site 2 out of 2 in 9w28

Go back to Magnesium Binding Sites List in 9w28
Magnesium binding site 2 out of 2 in the Structure of AU3+ Bound to Human Heavy Chain Ferritin Nanocage.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of AU3+ Bound to Human Heavy Chain Ferritin Nanocage. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg206

b:17.3
occ:0.50
O A:HOH416 2.0 17.4 1.0
O A:HOH383 2.0 17.9 0.5
O A:HOH409 2.1 20.4 1.0
O A:HOH414 2.1 18.7 0.5
O A:HOH417 4.2 20.0 1.0
NZ A:LYS86 4.4 16.2 0.4
O A:HOH411 4.5 23.8 1.0
CE A:LYS87 4.7 16.1 0.6
CD A:LYS86 4.8 17.9 1.0
CE A:LYS86 4.9 18.8 1.0

Reference:

T.Qi, J.Fu, Y.Wang, M.Zhao, Z.Zhang, W.Peng, Q.Liu, M.Liu, S.Li, Q.Duan, C.Wang, J.Zhuang, X.Yan, Y.Liu, H.Wang, X.Huang. Computationally Guided Protein-Gold Nanosheet Nanostructures For Targeted Recognition and Clearance of Amyloid-Beta Plaques To Be Published.
Page generated: Mon Oct 5 17:46:13 2026

Last articles

Zn in 9ZLY
Zn in 9ZPK
Zn in 9ZPL
Zn in 9ZM2
Zn in 9ZO4
Zn in 9ZO5
Zn in 9ZOH
Zn in 9ZOF
Zn in 9ZIQ
Zn in 9ZD4
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy