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Magnesium in PDB, part 316 (files: 12601-12640), PDB 5vcu-5vs0

Experimental structures of coordination spheres of Magnesium (Mg) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Magnesium atoms. PDB files: 12601-12640 (PDB 5vcu-5vs0).
  1. 5vcu (Mg: 2) - Crystal Structure of Ras-Related C3 Botulinum Toxin Substrate 1 Isoform X2 From Naegleria Fowleri in Complex with Gdp
  2. 5vec (Mg: 2) - Crystal Structure of the R515L Missense Variant of Human PGM1
  3. 5vez (Mg: 1) - Dna Polymerase Beta Substrate Complex with 8-Oxog:A at the Primer Terminus and Incoming Dctp Analog
    Other atoms: Na (3);
  4. 5vf2 (Mg: 1) - Scfv 2D10 Re-Refined As A Complex with Trehalose Replacing the Original Alpha-1,6-Mannobiose
  5. 5vg7 (Mg: 2) - Crystal Structure of the R503Q Missense Variant of Human PGM1
  6. 5vgt (Mg: 1) - X-Ray Structure of Bacteriophage SF6 Tail Adaptor Protein GP7
    Other atoms: Ca (4);
  7. 5vhc (Mg: 1) - DHX36 with An N-Terminal Truncation Bound to Adp-BEF3
    Other atoms: F (3);
  8. 5vi8 (Mg: 1) - Structure of A Mycobacterium Smegmatis Transcription Initiation Complex with An Upstream-Fork Promoter Fragment
    Other atoms: Zn (2);
  9. 5vj3 (Mg: 1) - Hiv Protease (Pr) in Open Form with MG2+ in Active Site and Hive-9 in Eye Site
    Other atoms: F (3);
  10. 5vj7 (Mg: 1) - Ferredoxin Nadp Oxidoreductase (Xfn)
    Other atoms: Fe (10);
  11. 5vj9 (Mg: 1) - Guanidine-II Riboswitch P2 Hairpin Dimer From Pseudomonas Aeruginosa
    Other atoms: K (1);
  12. 5vjb (Mg: 1) - Guanidine-II Riboswitch P2 Hairpin Dimer with 5-Bromou Substitution From Pseudomonas Aeruginosa
    Other atoms: Br (4);
  13. 5vk4 (Mg: 2) - Crystal Structure of A Phosphoribosylformylglycinamidine Cyclo-Ligase From Neisseria Gonorrhoeae Bound to Amppnp and Magnesium
  14. 5vkw (Mg: 2) - Crystal Structure of Adenylosuccinate Lyase ADE13 From Candida Albicans
    Other atoms: Cl (8); Ca (2);
  15. 5vm2 (Mg: 2) - Crystal Structure of ECK1772, An Oxidoreductase/Dehydrogenase of Unknown Specificity Involved in Membrane Biogenesis From Escherichia Coli
    Other atoms: Cl (1); Zn (2);
  16. 5vn4 (Mg: 1) - Crystal Structure of Adenine Phosphoribosyl Transferase From Trypanosoma Brucei in Complex with Amp, Pyrophosphate, and Ribose-5- Phosphate
  17. 5vn6 (Mg: 2) - Crystal Structure of Taurine Dioxygenase From Burkholderia Ambifaria
  18. 5vo8 (Mg: 2) - X-Ray Crystal Structure of A Bacterial Reiterative Transcription Complex of Pyrg Promoter
    Other atoms: Zn (2);
  19. 5voe (Mg: 2) - Desgla-XAS195A Bound to Aptamer 11F7T
    Other atoms: F (19); Ca (1); Na (1);
  20. 5vof (Mg: 2) - Desgla-XAS195A Bound to Aptamer 11F7T and Rivaroxaban
    Other atoms: F (19); Ca (1); Cl (1); Na (1);
  21. 5vog (Mg: 2) - Crystal Structure of A Hypothetical Protein From Neisseria Gonorrhoeae with Bound Ppgpp
  22. 5voi (Mg: 3) - X-Ray Crystal Structure of Bacterial Rna Polymerase and Pyrg Promoter Complex
    Other atoms: Zn (2);
  23. 5vp0 (Mg: 3) - Discovery of Clinical Candidate N-{(1S)-1-[3-Fluoro-4- (Trifluoromethoxy)Phenyl]-2-Methoxyethyl}-7-Methoxy-2-Oxo-2,3- Dihydropyrido[2,3-B]Pyrazine-4(1H)-Carboxamide (Tak-915), A Highly Potent, Selective, and Brain-Penetrating Phosphodiesterase 2A Inhibitor For the Treatment of Cognitive Disorders
    Other atoms: F (12); Zn (3);
  24. 5vp1 (Mg: 4) - Discovery of Clinical Candidate N-{(1S)-1-[3-Fluoro-4- (Trifluoromethoxy)Phenyl]-2-Methoxyethyl}-7-Methoxy-2-Oxo-2,3- Dihydropyrido[2,3-B]Pyrazine-4(1H)-Carboxamide (Tak-915), A Highly Potent, Selective, and Brain-Penetrating Phosphodiesterase 2A Inhibitor For the Treatment of Cognitive Disorders
    Other atoms: F (9); Zn (3);
  25. 5vp7 (Mg: 2) - Crystal Structure of Human Kras G12A Mutant in Complex with Gdp
    Other atoms: Na (2);
  26. 5vpi (Mg: 2) - Crystal Structure of Human Kras G12A Mutant in Complex with Gtp
  27. 5vpy (Mg: 2) - Crystal Structure of Human Kras G12A Mutant in Complex with Gppnhp
  28. 5vpz (Mg: 2) - Crystal Structure of Human Kras G12A Mutant in Complex with Gtp-Gamma- S
  29. 5vq0 (Mg: 2) - Crystal Structure of Human Kras G12A Mutant in Complex with Gdp (Edta Soaked)
  30. 5vq1 (Mg: 2) - Crystal Structure of Human Kras Q61A Mutant in Complex with Gdp
  31. 5vq2 (Mg: 2) - Crystal Structure of Human Wt-Kras in Complex with Gtp
  32. 5vq6 (Mg: 2) - Crystal Structure of Human Wt-Kras in Complex with Gtp-Gamma-S
  33. 5vq8 (Mg: 2) - Crystal Structure of Human Wt-Kras in Complex with Gdp (Edta Soaked)
  34. 5vr7 (Mg: 2) - Aba-Mimicking Ligand AMF1ALPHA in Complex with Aba Receptor PYL2 and PP2C HAB1
    Other atoms: F (1);
  35. 5vrh (Mg: 1) - Apolipoprotein N-Acyltransferase C387S Active Site Mutant
    Other atoms: Cl (1);
  36. 5vrj (Mg: 2) - 2009 H1N1 Pa Endonuclease in Complex with Ro-7 and Magnesium
    Other atoms: F (3);
  37. 5vro (Mg: 3) - Aba-Mimicking Ligand AMF1BETA in Complex with Aba Receptor PYL2 and PP2C HAB1
    Other atoms: F (1);
  38. 5vry (Mg: 6) - Human Dna Polymerase Beta 8-Oxog:Dc Extension with Dttp After 20 S
    Other atoms: Cl (1);
  39. 5vrz (Mg: 5) - Human Dna Polymerase Beta 8-Oxog:Dc Extension with Dttp After 60 S
    Other atoms: Cl (2); Na (1);
  40. 5vs0 (Mg: 6) - Human Dna Polymerase Beta 8-Oxog:Dc Extension with Dttp After 80 S
    Other atoms: Cl (2);
Page generated: Sat Apr 17 16:34:41 2021

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